RNA–Protein interactions for RNA: ENST00000538046.6

KDM2B-206, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,301 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-206ENST00000538046 TM6SF1Q9BZW5 370 aa11.18□□□□□ -0.62
KDM2B-206ENST00000538046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
KDM2B-206ENST00000538046 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
KDM2B-206ENST00000538046 PDE8AO60658 829 aa11.18□□□□□ -0.62
KDM2B-206ENST00000538046 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
KDM2B-206ENST00000538046 ZSCAN31Q96LW9 406 aaPredicted RBP11.18□□□□□ -0.62
KDM2B-206ENST00000538046 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
KDM2B-206ENST00000538046 CHMP3Q9Y3E7 222 aa11.18□□□□□ -0.62
KDM2B-206ENST00000538046 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
KDM2B-206ENST00000538046 CDHR2Q9BYE9 1310 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 NPR1P16066 1061 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 AK2P54819 239 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
KDM2B-206ENST00000538046 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 TTLL6Q8N841 843 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 RNF214Q8ND24 703 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 KCNB2Q92953 911 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 KAZALD1Q96I82 304 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
KDM2B-206ENST00000538046 ATP6V1DQ9Y5K8 247 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 CYP46A1Q9Y6A2 500 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 KIAA1551Q9HCM1 1747 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 KLRG2A4D1S0 409 aaPredicted RBP11.17□□□□□ -0.62
KDM2B-206ENST00000538046 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 SASH1O94885 1247 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 CASTP20810 708 aaKnown RBP11.17□□□□□ -0.62
KDM2B-206ENST00000538046 CRY2Q49AN0 593 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 DDX46Q7L014 1031 aaKnown RBP11.17□□□□□ -0.62
KDM2B-206ENST00000538046 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
KDM2B-206ENST00000538046 RBM17Q96I25 401 aaKnown RBP11.17□□□□□ -0.62
KDM2B-206ENST00000538046 CACNA1SQ13698 1873 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 CASP7P55210 303 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 CTSWP56202 376 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 NOLC1Q14978 699 aaKnown RBP eCLIP11.16□□□□□ -0.62
KDM2B-206ENST00000538046 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 TEX2Q8IWB9 1127 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 CNKSR1Q969H4 720 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 EAF2Q96CJ1 260 aaPredicted RBP11.16□□□□□ -0.62
KDM2B-206ENST00000538046 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
KDM2B-206ENST00000538046 SMC3Q9UQE7 1217 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 KIF3AQ9Y496 699 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 RIC1Q4ADV7 1423 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
KDM2B-206ENST00000538046 PSMA5P28066 241 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 ALDH1B1P30837 517 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 KCNJ4P48050 445 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 RNF20Q5VTR2 975 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 STYK1Q6J9G0 422 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
KDM2B-206ENST00000538046 JAKMIP1Q96N16 626 aaKnown RBP11.15□□□□□ -0.62
KDM2B-206ENST00000538046 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 PDRG1Q9NUG6 133 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 LAMB2P55268 1798 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 RUFY3Q7L099 469 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 COPRSQ9NQ92 184 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 SNRKQ9NRH2 765 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 SPTLC3Q9NUV7 552 aa11.15□□□□□ -0.62
KDM2B-206ENST00000538046 DLEC1Q9Y238 1755 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 MYH3P11055 1940 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 YBX3P16989 372 aaKnown RBP eCLIP11.14□□□□□ -0.63
KDM2B-206ENST00000538046 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
KDM2B-206ENST00000538046 PTH1RQ03431 593 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 NECTIN1Q15223 517 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 SF3B3Q15393 1217 aaKnown RBP11.14□□□□□ -0.63
KDM2B-206ENST00000538046 ZNF771Q7L3S4 317 aaPredicted RBP11.14□□□□□ -0.63
KDM2B-206ENST00000538046 TTLL11Q8NHH1 800 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 CCDC8Q9H0W5 538 aaPredicted RBP11.14□□□□□ -0.63
KDM2B-206ENST00000538046 SEC31BQ9NQW1 1179 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 BRCA1P38398 1863 aaKnown RBP11.14□□□□□ -0.63
KDM2B-206ENST00000538046 STX6O43752 255 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 C21orf2O43822 256 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 TPM3P06753 285 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 ZSCAN22P10073 491 aaPredicted RBP11.14□□□□□ -0.63
KDM2B-206ENST00000538046 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 LMBR1LQ6UX01 489 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 TMEM87AQ8NBN3 555 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 TSC1Q92574 1164 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 MAP4K1Q92918 833 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 FSD1Q9BTV5 496 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 SIL1Q9H173 461 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 GREM2Q9H772 168 aa11.14□□□□□ -0.63
KDM2B-206ENST00000538046 TAF1P21675 1872 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 HOXA10P31260 410 aaPredicted RBP11.13□□□□□ -0.63
KDM2B-206ENST00000538046 ANKRD1Q15327 319 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 PLA2G12BQ9BX93 195 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
KDM2B-206ENST00000538046 SLX4Q8IY92 1834 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 IGSF3O75054 1194 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
KDM2B-206ENST00000538046 FOXO4P98177 505 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 SLC20A2Q08357 652 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 NMIQ13287 307 aaPredicted RBP11.13□□□□□ -0.63
KDM2B-206ENST00000538046 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 OLFM4Q6UX06 510 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 CELF1Q92879 486 aaKnown RBP11.13□□□□□ -0.63
KDM2B-206ENST00000538046 CRAMP1Q96RY5 1269 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 BOLA2Q9H3K6 86 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
KDM2B-206ENST00000538046 RPAP1Q9BWH6 1393 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms