RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 ANO6Q4KMQ2 910 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 CHADLQ6NUI6 762 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 KCNG4Q8TDN1 519 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 UBXN4Q92575 508 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 THUMPD2Q9BTF0 503 aaKnown RBP6.77□□□□□ -1.33
CHD4-206ENST00000536999 USP44Q9H0E7 712 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 GBP3Q9H0R5 595 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 CBX8Q9HC52 389 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 DACT1Q9NYF0 836 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 DBF4Q9UBU7 674 aaPredicted RBP6.77□□□□□ -1.33
CHD4-206ENST00000536999 DACH1Q9UI36 760 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 RCOR1Q9UKL0 485 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 NSFL1CQ9UNZ2 370 aaKnown RBP6.77□□□□□ -1.33
CHD4-206ENST00000536999 MRVI1Q9Y6F6 885 aa6.77□□□□□ -1.33
CHD4-206ENST00000536999 ERBB3P21860 1342 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PHLPP2Q6ZVD8 1323 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 LY75O60449 1722 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 EFCAB8A8MWE9 144 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 IKBKBO14920 756 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 EIF3JO75822 258 aaKnown RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 PRR29P0C7W0 189 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PTGS1P23219 599 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 RPS6KB1P23443 525 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 AMPHP49418 695 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 FGD1P98174 961 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 FAM160A1Q05DH4 1040 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 AMOTQ4VCS5 1084 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 DALRD3Q5D0E6 543 aaKnown RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 HDGFL1Q5TGJ6 251 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 FOXD4L5Q5VV16 416 aaPredicted RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 CWC27Q6UX04 472 aaKnown RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 NYAP1Q6ZVC0 841 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PPP1R42Q7Z4L9 355 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 NME9Q86XW9 330 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 CCDC83Q8IWF9 413 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 ELOA2Q8IYF1 753 aaPredicted RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 FBXL16Q8N461 479 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 SPC24Q8NBT2 197 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 MNS1Q8NEH6 495 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PI4K2BQ8TCG2 481 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 OTUD7AQ8TE49 926 aaPredicted RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 ANKRD24Q8TF21 1146 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 LEO1Q8WVC0 666 aaPredicted RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 FOXD4L4Q8WXT5 416 aaPredicted RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 DNAAF4Q8WXU2 420 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 MPHOSPH8Q99549 860 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 MCOLN1Q9GZU1 580 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 L2HGDHQ9H9P8 463 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 EFCC1Q9HA90 598 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PSD3Q9NYI0 1048 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 PALD1Q9ULE6 856 aa6.76□□□□□ -1.33
CHD4-206ENST00000536999 LRRFIP2Q9Y608 721 aaKnown RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 N4BP2Q86UW6 1770 aaPredicted RBP6.76□□□□□ -1.33
CHD4-206ENST00000536999 TNRC18O15417 2968 aaPredicted RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 C5P01031 1676 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 TMEM88BA6NKF7 163 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 ERLIN1O75477 346 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 FXR2P51116 673 aaKnown RBP eCLIP6.75□□□□□ -1.337e-15■■■■■ 38
CHD4-206ENST00000536999 NEXNQ0ZGT2 675 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 SNW1Q13573 536 aaKnown RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 MUM1L1Q5H9M0 696 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 CREB3L3Q68CJ9 461 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 BRAPQ7Z569 592 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 CCAR1Q8IX12 1150 aaKnown RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 CCAR2Q8N163 923 aaKnown RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 GPR161Q8N6U8 529 aaKnown RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 DCAF5Q96JK2 942 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 C16orf45Q96MC5 204 aaPredicted RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 ZNF830Q96NB3 372 aaPredicted RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 UTP14AQ9BVJ6 771 aaKnown RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 CCDC87Q9NVE4 849 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 FAM53CQ9NYF3 392 aa6.75□□□□□ -1.33
CHD4-206ENST00000536999 C9orf78Q9NZ63 289 aaPredicted RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 MAP2P11137 1827 aaKnown RBP6.75□□□□□ -1.33
CHD4-206ENST00000536999 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 USP54Q70EL1 1684 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 DLL1O00548 723 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 YEATS4O95619 227 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 SLFN14P0C7P3 912 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 U2AF2P26368 475 aaKnown RBP eCLIP6.74□□□□□ -1.33
CHD4-206ENST00000536999 TNNT3P45378 269 aaPredicted RBP6.74□□□□□ -1.33
CHD4-206ENST00000536999 SOX10P56693 466 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 RASSF7Q02833 373 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 SF3A1Q15459 793 aaKnown RBP6.74□□□□□ -1.33
CHD4-206ENST00000536999 ATP2B3Q16720 1220 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 CCDC158Q5M9N0 1113 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 USPL1Q5W0Q7 1092 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 ADALQ6DHV7 355 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 DPY19L2Q6NUT2 758 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
CHD4-206ENST00000536999 CPLX2Q6PUV4 134 aaKnown RBP6.74□□□□□ -1.33
CHD4-206ENST00000536999 MCM10Q7L590 875 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 AMIGO3Q86WK7 504 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 ZNF274Q96GC6 653 aaPredicted RBP6.74□□□□□ -1.33
CHD4-206ENST00000536999 NEK1Q96PY6 1258 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 SDF4Q9BRK5 362 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 KCNF1Q9H3M0 494 aa6.74□□□□□ -1.33
CHD4-206ENST00000536999 GDPD2Q9HCC8 539 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms