RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 BICDL1Q6ZP65 573 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 DEF6Q9H4E7 631 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 TTC41PQ6P2S7 1318 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 UBR3Q6ZT12 1888 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 NEK11Q8NG66 645 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 ST7Q9NRC1 585 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 EYA2O00167 538 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 CTSWP56202 376 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
SF3B2-216ENST00000534765 ST3GAL1Q11201 340 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 ERFEQ4G0M1 354 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 TCEANC2Q96MN5 208 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 NEUROD6Q96NK8 337 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 SNX14Q9Y5W7 946 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 GYS2P54840 703 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 HNRNPH2P55795 449 aaKnown RBP10.63□□□□□ -0.71
SF3B2-216ENST00000534765 SART3Q15020 963 aaKnown RBP10.63□□□□□ -0.71
SF3B2-216ENST00000534765 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 LRSAM1Q6UWE0 723 aa10.63□□□□□ -0.71
SF3B2-216ENST00000534765 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
SF3B2-216ENST00000534765 E2F4Q16254 413 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 PIBF1Q8WXW3 757 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 SNX21Q969T3 373 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 PLA2G12BQ9BX93 195 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 QTRT2Q9H974 415 aaKnown RBP10.62□□□□□ -0.71
SF3B2-216ENST00000534765 COL24A1Q17RW2 1714 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 GLRX3O76003 335 aaKnown RBP10.62□□□□□ -0.71
SF3B2-216ENST00000534765 TEX13AQ9BXU3 409 aaPredicted RBP10.62□□□□□ -0.71
SF3B2-216ENST00000534765 ZDHHC9Q9Y397 364 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 PHF14O94880 888 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 CAPN2P17655 700 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 KLRK1P26718 216 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 HSPA4P34932 840 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 RGS17Q9UGC6 210 aaPredicted RBP10.62□□□□□ -0.71
SF3B2-216ENST00000534765 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
SF3B2-216ENST00000534765 NIP7Q9Y221 180 aaKnown RBP eCLIP10.62□□□□□ -0.71
SF3B2-216ENST00000534765 MED23Q9ULK4 1368 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 MEX3CQ5U5Q3 659 aaKnown RBP10.61□□□□□ -0.71
SF3B2-216ENST00000534765 TERF2Q15554 542 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 MYCBPQ99417 103 aaPredicted RBP10.61□□□□□ -0.71
SF3B2-216ENST00000534765 RAD50Q92878 1312 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 SMIM22K7EJ46 135 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 GOLIM4O00461 696 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 ATP5JP18859 108 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
SF3B2-216ENST00000534765 XAGE2Q96GT9 111 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 ARAP2Q8WZ64 1704 aa10.61□□□□□ -0.71
SF3B2-216ENST00000534765 MCAMP43121 646 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 TDO2P48775 406 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 KRBA2Q6ZNG9 492 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 CDHR2Q9BYE9 1310 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 TMEM63CQ9P1W3 806 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 TRIM37O94972 964 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 ZNF445P59923 1031 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 GPS2Q13227 327 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 HAUS7Q99871 368 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 COL1A1P02452 1464 aaPredicted RBP10.6□□□□□ -0.71
SF3B2-216ENST00000534765 M0R2C6 588 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 GNPATO15228 680 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 NECTIN1Q15223 517 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 HSP90AB4PQ58FF6 505 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
SF3B2-216ENST00000534765 CNTROBQ8N137 903 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
SF3B2-216ENST00000534765 MYH7P12883 1935 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 NEK4P51957 841 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
SF3B2-216ENST00000534765 ERC1Q8IUD2 1116 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 FEZ2Q9UHY8 353 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-216ENST00000534765 ZAP70P43403 619 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 PHKA1P46020 1223 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 TTC14Q96N46 770 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 SLFN14P0C7P3 912 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 RAD51AP2Q09MP3 1159 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 GNL2Q13823 731 aaKnown RBP10.59□□□□□ -0.71
SF3B2-216ENST00000534765 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 NOM1Q5C9Z4 860 aaKnown RBP10.59□□□□□ -0.71
SF3B2-216ENST00000534765 STOX1Q6ZVD7 989 aa10.59□□□□□ -0.71
SF3B2-216ENST00000534765 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-216ENST00000534765 CCNL1Q9UK58 526 aaPredicted RBP10.59□□□□□ -0.71
SF3B2-216ENST00000534765 TRIM66O15016 1216 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 CELF1Q92879 486 aaKnown RBP10.58□□□□□ -0.72
SF3B2-216ENST00000534765 EVI5LQ96CN4 794 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 CARMIL3Q8ND23 1372 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 LDHAL6AQ6ZMR3 332 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 RUFY3Q7L099 469 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 CCAR2Q8N163 923 aaKnown RBP10.58□□□□□ -0.72
SF3B2-216ENST00000534765 OSBP2Q969R2 916 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 FSD1Q9BTV5 496 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
SF3B2-216ENST00000534765 BCCIPQ9P287 314 aaKnown RBP eCLIP10.58□□□□□ -0.72
SF3B2-216ENST00000534765 IL15P40933 162 aaPredicted RBP10.58□□□□□ -0.72
SF3B2-216ENST00000534765 IFIT5Q13325 482 aaKnown RBP10.58□□□□□ -0.72
SF3B2-216ENST00000534765 FAM196AQ6ZSG2 479 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.722e-10■■□□□ 12.4
SF3B2-216ENST00000534765 TACC3Q9Y6A5 838 aa10.58□□□□□ -0.72
SF3B2-216ENST00000534765 PDE8AO60658 829 aa10.57□□□□□ -0.72
SF3B2-216ENST00000534765 CYP2E1P05181 493 aaPredicted RBP10.57□□□□□ -0.72
SF3B2-216ENST00000534765 EVX2Q03828 476 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms