RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 KCNJ4P48050 445 aa18.54■□□□□ 0.56
CDC27-209ENST00000532893 CERS5Q8N5B7 392 aa18.54■□□□□ 0.56
CDC27-209ENST00000532893 ERO1AQ96HE7 468 aa18.54■□□□□ 0.56
CDC27-209ENST00000532893 MPHOSPH8Q99549 860 aa18.54■□□□□ 0.56
CDC27-209ENST00000532893 SNAP23O00161 211 aa18.53■□□□□ 0.56
CDC27-209ENST00000532893 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
CDC27-209ENST00000532893 CRHR2Q13324 411 aa18.53■□□□□ 0.56
CDC27-209ENST00000532893 SUPT20HL1Q3ZLR7 823 aa18.53■□□□□ 0.56
CDC27-209ENST00000532893 EFCC1Q9HA90 598 aa18.53■□□□□ 0.56
CDC27-209ENST00000532893 CLRN2A0PK11 232 aa18.52■□□□□ 0.56
CDC27-209ENST00000532893 F8W031 263 aaPredicted RBP18.52■□□□□ 0.56
CDC27-209ENST00000532893 GJA5P36382 358 aa18.52■□□□□ 0.56
CDC27-209ENST00000532893 CHRNDQ07001 517 aa18.52■□□□□ 0.56
CDC27-209ENST00000532893 NBPF12Q5TAG4 269 aaPredicted RBP18.52■□□□□ 0.56
CDC27-209ENST00000532893 OTUD7BQ6GQQ9 843 aa18.52■□□□□ 0.56
CDC27-209ENST00000532893 MTMR14Q8NCE2 650 aa18.52■□□□□ 0.56
CDC27-209ENST00000532893 PPP2R3BQ9Y5P8 575 aa18.52■□□□□ 0.56
CDC27-209ENST00000532893 ZNF646O15015 1829 aaPredicted RBP18.51■□□□□ 0.55
CDC27-209ENST00000532893 USP2O75604 605 aaPredicted RBP18.51■□□□□ 0.55
CDC27-209ENST00000532893 IREB2P48200 963 aaKnown RBP18.51■□□□□ 0.55
CDC27-209ENST00000532893 SP3Q02447 781 aa18.51■□□□□ 0.55
CDC27-209ENST00000532893 CFAP100Q494V2 611 aa18.51■□□□□ 0.55
CDC27-209ENST00000532893 ARMC5Q96C12 935 aa18.51■□□□□ 0.55
CDC27-209ENST00000532893 PRMT6Q96LA8 375 aaPredicted RBP18.51■□□□□ 0.55
CDC27-209ENST00000532893 PTPN18Q99952 460 aa18.51■□□□□ 0.55
CDC27-209ENST00000532893 VEZTQ9HBM0 779 aa18.51■□□□□ 0.55
CDC27-209ENST00000532893 UNCXA6NJT0 531 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 MYO1BO43795 1136 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 TAF5LO75529 589 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 CAP1Q01518 475 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 G2E3Q7L622 706 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 HELBQ8NG08 1087 aaPredicted RBP18.5■□□□□ 0.55
CDC27-209ENST00000532893 PLA2G12BQ9BX93 195 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 STK31Q9BXU1 1019 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 SPEF2Q9C093 1822 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 COL1A1P02452 1464 aaPredicted RBP18.5■□□□□ 0.55
CDC27-209ENST00000532893 SSC5DA1L4H1 1573 aa18.5■□□□□ 0.55
CDC27-209ENST00000532893 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
CDC27-209ENST00000532893 CSF1RP07333 972 aa18.49■□□□□ 0.55
CDC27-209ENST00000532893 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
CDC27-209ENST00000532893 GCKRQ14397 625 aa18.49■□□□□ 0.55
CDC27-209ENST00000532893 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
CDC27-209ENST00000532893 AOX1Q06278 1338 aa18.49■□□□□ 0.55
CDC27-209ENST00000532893 BRCA2P51587 3418 aa18.48■□□□□ 0.55
CDC27-209ENST00000532893 FXR1P51114 621 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDC27-209ENST00000532893 RBM5P52756 815 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDC27-209ENST00000532893 RASA3Q14644 834 aa18.48■□□□□ 0.55
CDC27-209ENST00000532893 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
CDC27-209ENST00000532893 JAG2Q9Y219 1238 aa18.48■□□□□ 0.55
CDC27-209ENST00000532893 TESPA1A2RU30 521 aaPredicted RBP18.47■□□□□ 0.55
CDC27-209ENST00000532893 SLC4A2P04920 1241 aa18.47■□□□□ 0.55
CDC27-209ENST00000532893 CASP7P55210 303 aa18.47■□□□□ 0.55
CDC27-209ENST00000532893 TSR2Q969E8 191 aaKnown RBP18.47■□□□□ 0.55
CDC27-209ENST00000532893 MYH3P11055 1940 aa18.47■□□□□ 0.55
CDC27-209ENST00000532893 IRS2Q9Y4H2 1338 aa18.47■□□□□ 0.55
CDC27-209ENST00000532893 ANKRD18BA2A2Z9 1011 aa18.46■□□□□ 0.55
CDC27-209ENST00000532893 IL1R1P14778 569 aa18.46■□□□□ 0.55
CDC27-209ENST00000532893 C15orf52Q6ZUT6 534 aaKnown RBP18.46■□□□□ 0.55
CDC27-209ENST00000532893 ZNF804AQ7Z570 1209 aa18.46■□□□□ 0.55
CDC27-209ENST00000532893 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
CDC27-209ENST00000532893 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
CDC27-209ENST00000532893 OPTNQ96CV9 577 aa18.45■□□□□ 0.54
CDC27-209ENST00000532893 ZNF333Q96JL9 665 aa18.45■□□□□ 0.54
CDC27-209ENST00000532893 MS4A4AQ96JQ5 239 aa18.45■□□□□ 0.54
CDC27-209ENST00000532893 COLQQ9Y215 455 aaPredicted RBP18.45■□□□□ 0.54
CDC27-209ENST00000532893 FKBP1AP62942 108 aaKnown RBP18.44■□□□□ 0.54
CDC27-209ENST00000532893 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
CDC27-209ENST00000532893 MYH16Q9H6N6 1097 aa18.44■□□□□ 0.54
CDC27-209ENST00000532893 PLIN1O60240 522 aa18.43■□□□□ 0.54
CDC27-209ENST00000532893 SLC4A8Q2Y0W8 1093 aa18.43■□□□□ 0.54
CDC27-209ENST00000532893 SLC9C1Q4G0N8 1177 aa18.43■□□□□ 0.54
CDC27-209ENST00000532893 BRI3BPQ8WY22 251 aa18.43■□□□□ 0.54
CDC27-209ENST00000532893 ZNF70Q9UC06 446 aaPredicted RBP18.43■□□□□ 0.54
CDC27-209ENST00000532893 PTCH2Q9Y6C5 1203 aa18.43■□□□□ 0.54
CDC27-209ENST00000532893 CEP290O15078 2479 aa18.42■□□□□ 0.54
CDC27-209ENST00000532893 MYCP01106 439 aaPredicted RBP18.42■□□□□ 0.54
CDC27-209ENST00000532893 FLIIQ13045 1269 aa18.42■□□□□ 0.54
CDC27-209ENST00000532893 IFIT5Q13325 482 aaKnown RBP18.42■□□□□ 0.54
CDC27-209ENST00000532893 ARHGEF6Q15052 776 aa18.42■□□□□ 0.54
CDC27-209ENST00000532893 TAF1CQ15572 869 aaPredicted RBP18.42■□□□□ 0.54
CDC27-209ENST00000532893 TWISTNBQ3B726 338 aaPredicted RBP18.42■□□□□ 0.54
CDC27-209ENST00000532893 DNAAF4Q8WXU2 420 aa18.42■□□□□ 0.54
CDC27-209ENST00000532893 TDRD3Q9H7E2 651 aaKnown RBP18.42■□□□□ 0.54
CDC27-209ENST00000532893 ZFYVE28Q9HCC9 887 aa18.42■□□□□ 0.54
CDC27-209ENST00000532893 CHMP3Q9Y3E7 222 aa18.42■□□□□ 0.54
CDC27-209ENST00000532893 CCL15-CCL14A0A0B4J2E2 113 aa18.41■□□□□ 0.54
CDC27-209ENST00000532893 FOXO4P98177 505 aa18.41■□□□□ 0.54
CDC27-209ENST00000532893 FKBP5Q13451 457 aaPredicted RBP18.41■□□□□ 0.54
CDC27-209ENST00000532893 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
CDC27-209ENST00000532893 CCL15Q16663 113 aa18.41■□□□□ 0.54
CDC27-209ENST00000532893 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.41■□□□□ 0.54
CDC27-209ENST00000532893 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
CDC27-209ENST00000532893 GTF2A2P52657 109 aa18.4■□□□□ 0.54
CDC27-209ENST00000532893 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
CDC27-209ENST00000532893 CDAN1Q8IWY9 1227 aa18.4■□□□□ 0.54
CDC27-209ENST00000532893 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
CDC27-209ENST00000532893 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
CDC27-209ENST00000532893 TCP10L2B9ZVM9 353 aa18.39■□□□□ 0.53
CDC27-209ENST00000532893 MAP3K9P80192 1104 aa18.39■□□□□ 0.53
CDC27-209ENST00000532893 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms