RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 E7EWF7 191 aa13.59□□□□□ -0.23
USP35-207ENST00000530546 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
USP35-207ENST00000530546 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
USP35-207ENST00000530546 PUS7LQ9H0K6 701 aaKnown RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
USP35-207ENST00000530546 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 PDE8BO95263 885 aa13.59□□□□□ -0.23
USP35-207ENST00000530546 PHKA1P46020 1223 aa13.59□□□□□ -0.23
USP35-207ENST00000530546 SMIM5Q71RC9 77 aa13.59□□□□□ -0.23
USP35-207ENST00000530546 DHX32Q7L7V1 743 aaKnown RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 ALDH8A1Q9H2A2 487 aaPredicted RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 CCT2P78371 535 aaKnown RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 LRRFIP1Q32MZ4 808 aaKnown RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
USP35-207ENST00000530546 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
USP35-207ENST00000530546 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
USP35-207ENST00000530546 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.24
USP35-207ENST00000530546 TSC1Q92574 1164 aa13.58□□□□□ -0.24
USP35-207ENST00000530546 MPHOSPH8Q99549 860 aa13.58□□□□□ -0.24
USP35-207ENST00000530546 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 TCHHQ07283 1943 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 PHLPP1O60346 1717 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 TOM1O60784 492 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 PDCP20941 246 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 SCRN1Q12765 414 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 CCDC102BQ68D86 513 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 VGLL2Q8N8G2 317 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 APPBP2Q92624 585 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 NGLY1Q96IV0 654 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 PIH1D3Q9NQM4 214 aaKnown RBP13.57□□□□□ -0.24
USP35-207ENST00000530546 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 ZFYP08048 801 aaPredicted RBP13.57□□□□□ -0.24
USP35-207ENST00000530546 SLC9C2Q5TAH2 1124 aa13.57□□□□□ -0.24
USP35-207ENST00000530546 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
USP35-207ENST00000530546 TFIP11Q9UBB9 837 aaKnown RBP13.57□□□□□ -0.24
USP35-207ENST00000530546 GPAA1O43292 621 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
USP35-207ENST00000530546 NCOA5Q9HCD5 579 aaKnown RBP13.56□□□□□ -0.24
USP35-207ENST00000530546 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 CTIFO43310 598 aaKnown RBP13.56□□□□□ -0.24
USP35-207ENST00000530546 FGAP02671 866 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 UBE2HP62256 183 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 TMEM87AQ8NBN3 555 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.56□□□□□ -0.24
USP35-207ENST00000530546 FOXP2O15409 715 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 APPP05067 770 aa13.56□□□□□ -0.24
USP35-207ENST00000530546 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
USP35-207ENST00000530546 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 H3BQV1 296 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 SLIT2O94813 1529 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 NUP98P52948 1817 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 PUM3Q15397 648 aaKnown RBP13.55□□□□□ -0.24
USP35-207ENST00000530546 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
USP35-207ENST00000530546 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
USP35-207ENST00000530546 PTF1AQ7RTS3 328 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 RAB11FIP4Q86YS3 637 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 EXOSC10Q01780 885 aaKnown RBP13.55□□□□□ -0.24
USP35-207ENST00000530546 SYCP1Q15431 976 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
USP35-207ENST00000530546 KRT85P78386 507 aa13.54□□□□□ -0.24
USP35-207ENST00000530546 FAM182BQ5T319 152 aa13.54□□□□□ -0.24
USP35-207ENST00000530546 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
USP35-207ENST00000530546 LPIN2Q92539 896 aa13.54□□□□□ -0.24
USP35-207ENST00000530546 CGNQ9P2M7 1197 aaKnown RBP13.54□□□□□ -0.24
USP35-207ENST00000530546 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
USP35-207ENST00000530546 TPM3P06753 285 aa13.54□□□□□ -0.24
USP35-207ENST00000530546 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
USP35-207ENST00000530546 MROH5Q6ZUA9 1318 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 ZNF532Q9HCE3 1301 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 PFKFB2O60825 505 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 SLC5A1P13866 664 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 ADD2P35612 726 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 SLC20A2Q08357 652 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 CCDC152Q4G0S7 254 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 CCDC183Q5T5S1 534 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 TTC6Q86TZ1 520 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
USP35-207ENST00000530546 ZNF213O14771 459 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP35-207ENST00000530546 IGHMBP2P38935 993 aaKnown RBP13.53□□□□□ -0.24
USP35-207ENST00000530546 ZSCAN25Q6NSZ9 544 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 NTSR2O95665 410 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
USP35-207ENST00000530546 IQSEC3Q9UPP2 1182 aaPredicted RBP13.53□□□□□ -0.24
USP35-207ENST00000530546 WNK3Q9BYP7 1800 aa13.52□□□□□ -0.24
USP35-207ENST00000530546 CCDC66A2RUB6 948 aa13.52□□□□□ -0.24
USP35-207ENST00000530546 UQCRFS1P1P0C7P4 283 aa13.52□□□□□ -0.24
USP35-207ENST00000530546 PDE6AP16499 860 aa13.52□□□□□ -0.24
USP35-207ENST00000530546 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.24
USP35-207ENST00000530546 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms