RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
SF3B2-204ENST00000525207 CERS5Q8N5B7 392 aa11.9□□□□□ -0.5
SF3B2-204ENST00000525207 C2orf69Q8N8R5 385 aa11.9□□□□□ -0.5
SF3B2-204ENST00000525207 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.51
SF3B2-204ENST00000525207 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
SF3B2-204ENST00000525207 UBE4AQ14139 1066 aa11.89□□□□□ -0.51
SF3B2-204ENST00000525207 RGMBQ6NW40 437 aa11.89□□□□□ -0.51
SF3B2-204ENST00000525207 ZBED3Q96IU2 234 aaPredicted RBP11.89□□□□□ -0.51
SF3B2-204ENST00000525207 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
SF3B2-204ENST00000525207 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
SF3B2-204ENST00000525207 HDAC9Q9UKV0 1011 aa11.89□□□□□ -0.51
SF3B2-204ENST00000525207 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 FAM155AB1AL88 458 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-204ENST00000525207 CA12O43570 354 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 PLIN1O60240 522 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 SLC10A3P09131 477 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 FKBP1AP62942 108 aaKnown RBP11.88□□□□□ -0.51
SF3B2-204ENST00000525207 FKBP1BP68106 108 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 SCAF8Q9UPN6 1271 aaKnown RBP11.88□□□□□ -0.51
SF3B2-204ENST00000525207 RIPOR2Q9Y4F9 1068 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 OTOFQ9HC10 1997 aa11.88□□□□□ -0.51
SF3B2-204ENST00000525207 RASAL3Q86YV0 1011 aa11.87□□□□□ -0.51
SF3B2-204ENST00000525207 APOBEC3FQ8IUX4 373 aaKnown RBP11.87□□□□□ -0.51
SF3B2-204ENST00000525207 ZIC5Q96T25 663 aa11.87□□□□□ -0.51
SF3B2-204ENST00000525207 SSC5DA1L4H1 1573 aa11.87□□□□□ -0.51
SF3B2-204ENST00000525207 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
SF3B2-204ENST00000525207 FAM205AQ6ZU69 1335 aa11.86□□□□□ -0.51
SF3B2-204ENST00000525207 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
SF3B2-204ENST00000525207 ZNF157P51786 506 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-204ENST00000525207 LRRC24Q50LG9 513 aa11.86□□□□□ -0.51
SF3B2-204ENST00000525207 MTMR14Q8NCE2 650 aa11.86□□□□□ -0.51
SF3B2-204ENST00000525207 TDRD7Q8NHU6 1098 aaKnown RBP11.86□□□□□ -0.51
SF3B2-204ENST00000525207 CCDC102AQ96A19 550 aa11.86□□□□□ -0.51
SF3B2-204ENST00000525207 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
SF3B2-204ENST00000525207 JAG2Q9Y219 1238 aa11.86□□□□□ -0.51
SF3B2-204ENST00000525207 GYG1P46976 350 aa11.85□□□□□ -0.51
SF3B2-204ENST00000525207 RARSP54136 660 aaKnown RBP11.85□□□□□ -0.51
SF3B2-204ENST00000525207 DLGAP5Q15398 846 aa11.85□□□□□ -0.51
SF3B2-204ENST00000525207 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
SF3B2-204ENST00000525207 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
SF3B2-204ENST00000525207 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
SF3B2-204ENST00000525207 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
SF3B2-204ENST00000525207 FAM84BQ96KN1 310 aaPredicted RBP11.85□□□□□ -0.51
SF3B2-204ENST00000525207 API5Q9BZZ5 524 aaKnown RBP11.85□□□□□ -0.51
SF3B2-204ENST00000525207 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
SF3B2-204ENST00000525207 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-204ENST00000525207 CAPN15O75808 1086 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 PDE8BO95263 885 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 UBTFL1P0CB47 393 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-204ENST00000525207 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 HIBADHP31937 336 aaKnown RBP11.84□□□□□ -0.51
SF3B2-204ENST00000525207 NF2P35240 595 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 RFX5P48382 616 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-204ENST00000525207 CFAP100Q494V2 611 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 PRAMEF18Q5VWM3 479 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 MOB2Q70IA6 237 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 PCDHAC2Q9Y5I4 1007 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 AOX1Q06278 1338 aa11.84□□□□□ -0.51
SF3B2-204ENST00000525207 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
SF3B2-204ENST00000525207 PUM3Q15397 648 aaKnown RBP11.83□□□□□ -0.52
SF3B2-204ENST00000525207 SAGE1Q9NXZ1 904 aa11.83□□□□□ -0.52
SF3B2-204ENST00000525207 PPP2R3BQ9Y5P8 575 aa11.83□□□□□ -0.52
SF3B2-204ENST00000525207 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
SF3B2-204ENST00000525207 EYA2O00167 538 aa11.82□□□□□ -0.52
SF3B2-204ENST00000525207 MYO1BO43795 1136 aa11.82□□□□□ -0.52
SF3B2-204ENST00000525207 FGFR2P21802 821 aa11.82□□□□□ -0.52
SF3B2-204ENST00000525207 KIF23Q02241 960 aaPredicted RBP11.82□□□□□ -0.52
SF3B2-204ENST00000525207 FBXO33Q7Z6M2 555 aa11.82□□□□□ -0.52
SF3B2-204ENST00000525207 VPS37DQ86XT2 251 aa11.82□□□□□ -0.52
SF3B2-204ENST00000525207 MEIS3Q99687 375 aa11.82□□□□□ -0.52
SF3B2-204ENST00000525207 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
SF3B2-204ENST00000525207 TTLL12Q14166 644 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-204ENST00000525207 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
SF3B2-204ENST00000525207 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
SF3B2-204ENST00000525207 ARHGAP45Q92619 1136 aa11.81□□□□□ -0.52
SF3B2-204ENST00000525207 PRMT6Q96LA8 375 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-204ENST00000525207 DEFB129Q9H1M3 183 aa11.81□□□□□ -0.52
SF3B2-204ENST00000525207 SERPINA10Q9UK55 444 aa11.81□□□□□ -0.52
SF3B2-204ENST00000525207 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
SF3B2-204ENST00000525207 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
SF3B2-204ENST00000525207 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-204ENST00000525207 LRRFIP2Q9Y608 721 aaKnown RBP11.81□□□□□ -0.52
SF3B2-204ENST00000525207 CIAO1O76071 339 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
SF3B2-204ENST00000525207 SLC5A1P13866 664 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
SF3B2-204ENST00000525207 CHAF1AQ13111 956 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-204ENST00000525207 GRIK5Q16478 980 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 INTS3Q68E01 1043 aaKnown RBP11.8□□□□□ -0.52
SF3B2-204ENST00000525207 ARMC9Q7Z3E5 817 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 CSRNP1Q96S65 589 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 VEZTQ9HBM0 779 aa11.8□□□□□ -0.52
SF3B2-204ENST00000525207 TRIM27P14373 513 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 CRKP46108 304 aa11.79□□□□□ -0.52
SF3B2-204ENST00000525207 BCAMP50895 628 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms