RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 FANCAO15360 1455 aa11.9□□□□□ -0.5
CTSC-203ENST00000524463 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.51
CTSC-203ENST00000524463 SELENOSQ9BQE4 189 aa11.9□□□□□ -0.51
CTSC-203ENST00000524463 CNNM2Q9H8M5 875 aa11.9□□□□□ -0.51
CTSC-203ENST00000524463 RMND1Q9NWS8 449 aa11.9□□□□□ -0.51
CTSC-203ENST00000524463 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.51
CTSC-203ENST00000524463 NOP56O00567 594 aaKnown RBP11.89□□□□□ -0.51
CTSC-203ENST00000524463 GTF2F1P35269 517 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTSC-203ENST00000524463 GABPAQ06546 454 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 RAD51AP2Q09MP3 1159 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 PPM1EQ8WY54 764 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 PAGR1Q9BTK6 254 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 BIRC2Q13490 618 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 KRT79Q5XKE5 535 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 LRRC45Q96CN5 670 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 DDX19AQ9NUU7 478 aaKnown RBP11.89□□□□□ -0.51
CTSC-203ENST00000524463 FAM47CQ5HY64 1035 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 TMX3Q96JJ7 454 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 TBC1D7Q9P0N9 293 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 TRIM6Q9C030 488 aaPredicted RBP11.89□□□□□ -0.51
CTSC-203ENST00000524463 NACA2Q9H009 215 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 CPA1P15085 419 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 IVNS1ABPQ9Y6Y0 642 aa11.89□□□□□ -0.51
CTSC-203ENST00000524463 UBXN1Q04323 297 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 KARSQ15046 597 aaKnown RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 RNF113AO15541 343 aaKnown RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 ERCC5P28715 1186 aaPredicted RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 IL15P40933 162 aaPredicted RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 MAK16Q9BXY0 300 aaKnown RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 DNM1Q05193 864 aaKnown RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 MAPK8IP1Q9UQF2 711 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 H0YIN7 160 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 CCNT1O60563 726 aaKnown RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 RNASE9P60153 205 aaKnown RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 KANK3Q6NY19 840 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
CTSC-203ENST00000524463 USP37Q86T82 979 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 TTLL3Q9Y4R7 772 aa11.88□□□□□ -0.51
CTSC-203ENST00000524463 ABCC11Q96J66 1382 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 VWA3AA6NCI4 1184 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 HSF2BPO75031 334 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 ITGA6P23229 1130 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTSC-203ENST00000524463 V9GYY5 206 aaPredicted RBP11.87□□□□□ -0.51
CTSC-203ENST00000524463 TIAM1Q13009 1591 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 B4DLN1 442 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 MRPL12P52815 198 aaKnown RBP11.87□□□□□ -0.51
CTSC-203ENST00000524463 HMG20BQ9P0W2 317 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 CCDC172P0C7W6 258 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 PRIM1P49642 420 aaKnown RBP11.87□□□□□ -0.51
CTSC-203ENST00000524463 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
CTSC-203ENST00000524463 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 ABL1P00519 1130 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 KRT19P08727 400 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 ZSCAN22P10073 491 aaPredicted RBP11.87□□□□□ -0.51
CTSC-203ENST00000524463 TIMM10P62072 90 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 DNAJC21Q5F1R6 531 aaKnown RBP11.87□□□□□ -0.51
CTSC-203ENST00000524463 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 USP21Q9UK80 565 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 B4E1Z4 1266 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 CTDSPL2Q05D32 466 aa11.87□□□□□ -0.51
CTSC-203ENST00000524463 C14orf93Q9H972 538 aaKnown RBP11.87□□□□□ -0.51
CTSC-203ENST00000524463 ANKRD2Q9GZV1 360 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 GGA1Q9UJY5 639 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 GEN1Q17RS7 908 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 IFT81Q8WYA0 676 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 PLEKHH1Q9ULM0 1364 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 CCT6AP40227 531 aaKnown RBP11.86□□□□□ -0.51
CTSC-203ENST00000524463 CFAP58Q5T655 872 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 KIFC2Q96AC6 838 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 FNBP1Q96RU3 617 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 CTNND2Q9UQB3 1225 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
CTSC-203ENST00000524463 CCDC155Q8N6L0 562 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
CTSC-203ENST00000524463 PCF11O94913 1555 aaKnown RBP11.86□□□□□ -0.51
CTSC-203ENST00000524463 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
CTSC-203ENST00000524463 GUCA1BQ9UMX6 200 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.85□□□□□ -0.51
CTSC-203ENST00000524463 PSMA7O14818 248 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 MCM3P25205 808 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 PDE1AP54750 535 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 MYL10Q9BUA6 226 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 PPANQ9NQ55 473 aaKnown RBP11.85□□□□□ -0.51
CTSC-203ENST00000524463 PTPN23Q9H3S7 1636 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 IQGAP2Q13576 1575 aa11.85□□□□□ -0.51
CTSC-203ENST00000524463 PLCH2O75038 1416 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms