RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 VEZTQ9HBM0 779 aa33.02■■■□□ 2.88
PVT1-219ENST00000523427 F6X3S4 739 aa33.01■■■□□ 2.87
PVT1-219ENST00000523427 CFAP100Q494V2 611 aa33.01■■■□□ 2.87
PVT1-219ENST00000523427 PPP1R12BO60237 982 aaPredicted RBP33■■■□□ 2.87
PVT1-219ENST00000523427 NOM1Q5C9Z4 860 aaKnown RBP33■■■□□ 2.87
PVT1-219ENST00000523427 PRPF38BQ5VTL8 546 aaKnown RBP33■■■□□ 2.87
PVT1-219ENST00000523427 FANCIQ9NVI1 1328 aa33■■■□□ 2.87
PVT1-219ENST00000523427 RBM5P52756 815 aaKnown RBP eCLIP32.99■■■□□ 2.87
PVT1-219ENST00000523427 ZNF804AQ7Z570 1209 aa32.99■■■□□ 2.87
PVT1-219ENST00000523427 IL16Q14005 1332 aa32.99■■■□□ 2.87
PVT1-219ENST00000523427 MANSC4A6NHS7 340 aaPredicted RBP32.98■■■□□ 2.87
PVT1-219ENST00000523427 MYO1BO43795 1136 aa32.98■■■□□ 2.87
PVT1-219ENST00000523427 FOXO4P98177 505 aa32.98■■■□□ 2.87
PVT1-219ENST00000523427 ZNF594Q96JF6 807 aaPredicted RBP32.98■■■□□ 2.87
PVT1-219ENST00000523427 PRMT6Q96LA8 375 aaPredicted RBP32.98■■■□□ 2.87
PVT1-219ENST00000523427 IRS2Q9Y4H2 1338 aa32.98■■■□□ 2.87
PVT1-219ENST00000523427 ALDH1A1P00352 501 aa32.97■■■□□ 2.87
PVT1-219ENST00000523427 TAF7LQ5H9L4 462 aa32.97■■■□□ 2.87
PVT1-219ENST00000523427 IFNL1Q8IU54 200 aa32.97■■■□□ 2.87
PVT1-219ENST00000523427 AOX1Q06278 1338 aa32.97■■■□□ 2.87
PVT1-219ENST00000523427 VAMP4O75379 141 aa32.96■■■□□ 2.87
PVT1-219ENST00000523427 EXOSC9Q06265 439 aaKnown RBP32.96■■■□□ 2.87
PVT1-219ENST00000523427 LMBR1LQ6UX01 489 aa32.96■■■□□ 2.87
PVT1-219ENST00000523427 MTMR14Q8NCE2 650 aa32.96■■■□□ 2.87
PVT1-219ENST00000523427 WNK4Q96J92 1243 aa32.96■■■□□ 2.87
PVT1-219ENST00000523427 CFHR5Q9BXR6 569 aa32.96■■■□□ 2.87
PVT1-219ENST00000523427 TRIM17Q9Y577 477 aa32.96■■■□□ 2.87
PVT1-219ENST00000523427 SPDYE2BA6NHP3 402 aa32.95■■■□□ 2.87
PVT1-219ENST00000523427 SPDYE6P0CI01 402 aa32.95■■■□□ 2.87
PVT1-219ENST00000523427 NBPF12Q5TAG4 269 aaPredicted RBP32.95■■■□□ 2.87
PVT1-219ENST00000523427 COL1A1P02452 1464 aaPredicted RBP32.94■■■□□ 2.86
PVT1-219ENST00000523427 IL1R1P14778 569 aa32.94■■■□□ 2.86
PVT1-219ENST00000523427 SUPT20HL1Q3ZLR7 823 aa32.94■■■□□ 2.86
PVT1-219ENST00000523427 EPHA10Q5JZY3 1008 aa32.94■■■□□ 2.86
PVT1-219ENST00000523427 C15orf52Q6ZUT6 534 aaKnown RBP32.94■■■□□ 2.86
PVT1-219ENST00000523427 CNNM1Q9NRU3 951 aa32.94■■■□□ 2.86
PVT1-219ENST00000523427 SSC5DA1L4H1 1573 aa32.94■■■□□ 2.86
PVT1-219ENST00000523427 IGF2BP3O00425 579 aaKnown RBP eCLIP32.93■■■□□ 2.86
PVT1-219ENST00000523427 INHBEP58166 350 aa32.93■■■□□ 2.86
PVT1-219ENST00000523427 CCDC57Q2TAC2 916 aa32.93■■■□□ 2.86
PVT1-219ENST00000523427 LDHAL6AQ6ZMR3 332 aa32.93■■■□□ 2.86
PVT1-219ENST00000523427 PPP2R3BQ9Y5P8 575 aa32.93■■■□□ 2.86
PVT1-219ENST00000523427 MAP3K11Q16584 847 aa32.92■■■□□ 2.86
PVT1-219ENST00000523427 BEND3Q5T5X7 828 aa32.92■■■□□ 2.86
PVT1-219ENST00000523427 ZBTB48P10074 688 aaPredicted RBP32.91■■■□□ 2.86
PVT1-219ENST00000523427 RASA3Q14644 834 aa32.91■■■□□ 2.86
PVT1-219ENST00000523427 PCDH10Q9P2E7 1040 aa32.91■■■□□ 2.86
PVT1-219ENST00000523427 IREB2P48200 963 aaKnown RBP32.9■■■□□ 2.86
PVT1-219ENST00000523427 USP2O75604 605 aaPredicted RBP32.89■■■□□ 2.86
PVT1-219ENST00000523427 MRS2Q9HD23 443 aa32.89■■■□□ 2.86
PVT1-219ENST00000523427 FKBP1AP62942 108 aaKnown RBP32.88■■■□□ 2.85
PVT1-219ENST00000523427 OTOP1Q7RTM1 612 aa32.88■■■□□ 2.85
PVT1-219ENST00000523427 C9orf78Q9NZ63 289 aaPredicted RBP32.88■■■□□ 2.85
PVT1-219ENST00000523427 GRM8O00222 908 aa32.87■■■□□ 2.85
PVT1-219ENST00000523427 GJA5P36382 358 aa32.87■■■□□ 2.85
PVT1-219ENST00000523427 GYG1P46976 350 aa32.86■■■□□ 2.85
PVT1-219ENST00000523427 SLC4A10Q6U841 1118 aa32.86■■■□□ 2.85
PVT1-219ENST00000523427 CD99L2Q8TCZ2 262 aa32.86■■■□□ 2.85
PVT1-219ENST00000523427 ELP3Q9H9T3 547 aa32.86■■■□□ 2.85
PVT1-219ENST00000523427 TTF2Q9UNY4 1162 aaKnown RBP32.86■■■□□ 2.85
PVT1-219ENST00000523427 CRHR2Q13324 411 aa32.85■■■□□ 2.85
PVT1-219ENST00000523427 MFSD14BQ5SR56 506 aa32.85■■■□□ 2.85
PVT1-219ENST00000523427 OTUD7BQ6GQQ9 843 aa32.85■■■□□ 2.85
PVT1-219ENST00000523427 WDR63Q8IWG1 891 aa32.85■■■□□ 2.85
PVT1-219ENST00000523427 ANKRD13AQ8IZ07 590 aa32.85■■■□□ 2.85
PVT1-219ENST00000523427 TDRD3Q9H7E2 651 aaKnown RBP32.85■■■□□ 2.85
PVT1-219ENST00000523427 ZNF70Q9UC06 446 aaPredicted RBP32.84■■■□□ 2.85
PVT1-219ENST00000523427 ERO1AQ96HE7 468 aa32.83■■■□□ 2.85
PVT1-219ENST00000523427 POTEFA5A3E0 1075 aa32.82■■■□□ 2.84
PVT1-219ENST00000523427 HIBADHP31937 336 aaKnown RBP32.82■■■□□ 2.84
PVT1-219ENST00000523427 PUS3Q9BZE2 481 aaKnown RBP32.82■■■□□ 2.84
PVT1-219ENST00000523427 SPINK5Q9NQ38 1064 aaPredicted RBP32.82■■■□□ 2.84
PVT1-219ENST00000523427 A0A1B0GUL6 1792 aa32.81■■■□□ 2.84
PVT1-219ENST00000523427 TCP10L2B9ZVM9 353 aa32.81■■■□□ 2.84
PVT1-219ENST00000523427 CDAN1Q8IWY9 1227 aa32.81■■■□□ 2.84
PVT1-219ENST00000523427 OPTNQ96CV9 577 aa32.81■■■□□ 2.84
PVT1-219ENST00000523427 PTPN18Q99952 460 aa32.81■■■□□ 2.84
PVT1-219ENST00000523427 FAM205AQ6ZU69 1335 aa32.8■■■□□ 2.84
PVT1-219ENST00000523427 ECM29Q5VYK3 1845 aa32.8■■■□□ 2.84
PVT1-219ENST00000523427 UNCXA6NJT0 531 aa32.8■■■□□ 2.84
PVT1-219ENST00000523427 TNFAIP1Q13829 316 aa32.8■■■□□ 2.84
PVT1-219ENST00000523427 SPDYE2Q495Y8 402 aa32.8■■■□□ 2.84
PVT1-219ENST00000523427 TDRD7Q8NHU6 1098 aaKnown RBP32.8■■■□□ 2.84
PVT1-219ENST00000523427 IQSEC3Q9UPP2 1182 aaPredicted RBP32.8■■■□□ 2.84
PVT1-219ENST00000523427 CACNA1FO60840 1977 aa32.79■■■□□ 2.84
PVT1-219ENST00000523427 NCBP3Q53F19 620 aaKnown RBP32.79■■■□□ 2.84
PVT1-219ENST00000523427 FAM84BQ96KN1 310 aaPredicted RBP32.79■■■□□ 2.84
PVT1-219ENST00000523427 EFCC1Q9HA90 598 aa32.79■■■□□ 2.84
PVT1-219ENST00000523427 PTPN22Q9Y2R2 807 aa32.79■■■□□ 2.84
PVT1-219ENST00000523427 UBE4AQ14139 1066 aa32.78■■■□□ 2.84
PVT1-219ENST00000523427 DZIP1LQ8IYY4 767 aaKnown RBP32.78■■■□□ 2.84
PVT1-219ENST00000523427 CNKSR2Q8WXI2 1034 aa32.78■■■□□ 2.84
PVT1-219ENST00000523427 SP3Q02447 781 aa32.77■■■□□ 2.84
PVT1-219ENST00000523427 INTS3Q68E01 1043 aaKnown RBP32.77■■■□□ 2.84
PVT1-219ENST00000523427 SUCLG2Q96I99 432 aa32.77■■■□□ 2.84
PVT1-219ENST00000523427 SRCIN1Q9C0H9 1055 aa32.77■■■□□ 2.84
PVT1-219ENST00000523427 SERPINA10Q9UK55 444 aa32.77■■■□□ 2.84
PVT1-219ENST00000523427 CRKP46108 304 aa32.76■■■□□ 2.83
PVT1-219ENST00000523427 CHAF1AQ13111 956 aaPredicted RBP32.76■■■□□ 2.83
PVT1-219ENST00000523427 TMEM39BQ9GZU3 492 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms