RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 DEFB129Q9H1M3 183 aa11.95□□□□□ -0.5
SDC2-207ENST00000522911 FAM205AQ6ZU69 1335 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 MANSC4A6NHS7 340 aaPredicted RBP11.94□□□□□ -0.5
SDC2-207ENST00000522911 GPR25O00155 361 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 GRM8O00222 908 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 ALDH1L1O75891 902 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 SASH1O94885 1247 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 KCNJ4P48050 445 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 DLGAP5Q15398 846 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
SDC2-207ENST00000522911 MKI67P46013 3256 aaKnown RBP11.93□□□□□ -0.5
SDC2-207ENST00000522911 UTYO14607 1347 aa11.93□□□□□ -0.5
SDC2-207ENST00000522911 CENPFP49454 3210 aa11.93□□□□□ -0.5
SDC2-207ENST00000522911 MYO1BO43795 1136 aa11.93□□□□□ -0.5
SDC2-207ENST00000522911 PPP1R12BO60237 982 aaPredicted RBP11.93□□□□□ -0.5
SDC2-207ENST00000522911 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
SDC2-207ENST00000522911 UBE4AQ14139 1066 aa11.93□□□□□ -0.5
SDC2-207ENST00000522911 TTLL12Q14166 644 aaPredicted RBP11.93□□□□□ -0.5
SDC2-207ENST00000522911 SUPT20HL1Q3ZLR7 823 aa11.93□□□□□ -0.5
SDC2-207ENST00000522911 FBXO46Q6PJ61 603 aaPredicted RBP11.93□□□□□ -0.5
SDC2-207ENST00000522911 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
SDC2-207ENST00000522911 SSC5DA1L4H1 1573 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 A0A1B0GUL6 1792 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 FKTNO75072 461 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 CCDC57Q2TAC2 916 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 LMBR1LQ6UX01 489 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 TDRD7Q8NHU6 1098 aaKnown RBP11.92□□□□□ -0.5
SDC2-207ENST00000522911 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 MRS2Q9HD23 443 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 SCAF8Q9UPN6 1271 aaKnown RBP11.92□□□□□ -0.5
SDC2-207ENST00000522911 BRCA2P51587 3418 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 ECM29Q5VYK3 1845 aa11.92□□□□□ -0.5
SDC2-207ENST00000522911 F6X3S4 739 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 SNAP23O00161 211 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 TAF5LO75529 589 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 TBC1D8O95759 1140 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 TNFAIP1Q13829 316 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 CFAP100Q494V2 611 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 SLC10A4Q96EP9 437 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
SDC2-207ENST00000522911 ANGEL1Q9UNK9 670 aaKnown RBP11.91□□□□□ -0.5
SDC2-207ENST00000522911 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
SDC2-207ENST00000522911 RABL6Q3YEC7 729 aaPredicted RBP11.9□□□□□ -0.5
SDC2-207ENST00000522911 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
SDC2-207ENST00000522911 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
SDC2-207ENST00000522911 HELBQ8NG08 1087 aaPredicted RBP11.9□□□□□ -0.5
SDC2-207ENST00000522911 PRMT6Q96LA8 375 aaPredicted RBP11.9□□□□□ -0.5
SDC2-207ENST00000522911 MRIQ9BWK5 157 aa11.9□□□□□ -0.5
SDC2-207ENST00000522911 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
SDC2-207ENST00000522911 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
SDC2-207ENST00000522911 ZNF521Q96K83 1311 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 ANP32CO43423 234 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 SOX10P56693 466 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 HDLBPQ00341 1268 aaKnown RBP11.89□□□□□ -0.51
SDC2-207ENST00000522911 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 PRPF38BQ5VTL8 546 aaKnown RBP11.89□□□□□ -0.51
SDC2-207ENST00000522911 ANKRD13AQ8IZ07 590 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 KAZALD1Q96I82 304 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
SDC2-207ENST00000522911 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 C9orf78Q9NZ63 289 aaPredicted RBP11.89□□□□□ -0.51
SDC2-207ENST00000522911 RIPOR2Q9Y4F9 1068 aa11.89□□□□□ -0.51
SDC2-207ENST00000522911 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
SDC2-207ENST00000522911 KIF16BQ96L93 1317 aa11.88□□□□□ -0.51
SDC2-207ENST00000522911 USP2O75604 605 aaPredicted RBP11.88□□□□□ -0.51
SDC2-207ENST00000522911 IREB2P48200 963 aaKnown RBP11.88□□□□□ -0.51
SDC2-207ENST00000522911 RASA3Q14644 834 aa11.88□□□□□ -0.51
SDC2-207ENST00000522911 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
SDC2-207ENST00000522911 INTS3Q68E01 1043 aaKnown RBP11.88□□□□□ -0.51
SDC2-207ENST00000522911 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
SDC2-207ENST00000522911 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
SDC2-207ENST00000522911 CHMP3Q9Y3E7 222 aa11.88□□□□□ -0.51
SDC2-207ENST00000522911 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 IGF2BP3O00425 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
SDC2-207ENST00000522911 HIBADHP31937 336 aaKnown RBP11.87□□□□□ -0.51
SDC2-207ENST00000522911 MFSD14BQ5SR56 506 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 NBPF12Q5TAG4 269 aaPredicted RBP11.87□□□□□ -0.51
SDC2-207ENST00000522911 FKBP1CQ5VVH2 108 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 ZNF594Q96JF6 807 aaPredicted RBP11.87□□□□□ -0.51
SDC2-207ENST00000522911 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 TEPSINQ96N21 525 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 SUGT1Q9Y2Z0 365 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 PCDHAC2Q9Y5I4 1007 aa11.87□□□□□ -0.51
SDC2-207ENST00000522911 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
SDC2-207ENST00000522911 ZBTB22O15209 634 aa11.86□□□□□ -0.51
SDC2-207ENST00000522911 PRKG1Q13976 671 aa11.86□□□□□ -0.51
SDC2-207ENST00000522911 OTOP1Q7RTM1 612 aa11.86□□□□□ -0.51
SDC2-207ENST00000522911 DZIP1LQ8IYY4 767 aaKnown RBP11.86□□□□□ -0.51
SDC2-207ENST00000522911 VGLL2Q8N8G2 317 aa11.86□□□□□ -0.51
SDC2-207ENST00000522911 TBC1D22AQ8WUA7 517 aa11.86□□□□□ -0.51
SDC2-207ENST00000522911 ZNF70Q9UC06 446 aaPredicted RBP11.86□□□□□ -0.51
SDC2-207ENST00000522911 PTPRCP08575 1304 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 506.1 ms