RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TMEM130Q8N3G9 435 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 ASAP3Q8TDY4 903 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 AKTIPQ9H8T0 292 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 DCTN4Q9UJW0 460 aa8□□□□□ -1.13
HMGB1P1-201ENST00000522557 A0A1W2PP55 124 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 METTL12A8MUP2 240 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 F8W735 103 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 H3BRJ5 948 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 WISP1O95388 367 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 ZNF16P17020 682 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 CABP4P57796 275 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 COL19A1Q14993 1142 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 VN1R5Q7Z5H4 357 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 SLC7A3Q8WY07 619 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 BSNDQ8WZ55 320 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 TP53INP1Q96A56 240 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 MEGF10Q96KG7 1140 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 RBCK1Q9BYM8 510 aa7.99□□□□□ -1.13
HMGB1P1-201ENST00000522557 ANKRD33BA6NCL7 494 aa7.98□□□□□ -1.13
HMGB1P1-201ENST00000522557 KLHL23Q8NBE8 558 aa7.98□□□□□ -1.13
HMGB1P1-201ENST00000522557 BHLHE41Q9C0J9 482 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P1-201ENST00000522557 SEC31BQ9NQW1 1179 aa7.98□□□□□ -1.13
HMGB1P1-201ENST00000522557 SOX1O00570 391 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P1-201ENST00000522557 EIF1AYO14602 144 aaKnown RBP7.97□□□□□ -1.13
HMGB1P1-201ENST00000522557 ADAM11O75078 769 aa7.97□□□□□ -1.13
HMGB1P1-201ENST00000522557 CPNE3O75131 537 aaKnown RBP7.97□□□□□ -1.13
HMGB1P1-201ENST00000522557 NEFLP07196 543 aa7.97□□□□□ -1.13
HMGB1P1-201ENST00000522557 DCAF11Q8TEB1 546 aa7.97□□□□□ -1.13
HMGB1P1-201ENST00000522557 DYRK3O43781 588 aa7.96□□□□□ -1.14
HMGB1P1-201ENST00000522557 PIP4K2BP78356 416 aa7.96□□□□□ -1.14
HMGB1P1-201ENST00000522557 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.14
HMGB1P1-201ENST00000522557 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.96□□□□□ -1.14
HMGB1P1-201ENST00000522557 TMC7Q7Z402 723 aa7.96□□□□□ -1.14
HMGB1P1-201ENST00000522557 UBASH3BQ8TF42 649 aa7.96□□□□□ -1.14
HMGB1P1-201ENST00000522557 TCF12Q99081 682 aa7.96□□□□□ -1.14
HMGB1P1-201ENST00000522557 VAMP1P23763 118 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 GRIA4P48058 902 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 NLRP12P59046 1061 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 IKBKEQ14164 716 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 DUOXA2Q1HG44 320 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 KIAA1211Q6ZU35 1233 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 ACAD11Q709F0 780 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 CCNJLQ8IV13 435 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 WNT8BQ93098 351 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 CCDC74AQ96AQ1 378 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 DMRTB1Q96MA1 342 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 LIN7BQ9HAP6 207 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 NPHS2Q9NP85 383 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 OSGEPQ9NPF4 335 aa7.95□□□□□ -1.14
HMGB1P1-201ENST00000522557 E9PSI1 815 aa7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 GLB1P16278 677 aa7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 FMR1Q06787 632 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 C19orf57Q0VDD7 668 aa7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 DSC3Q14574 896 aa7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 KIAA0319Q5VV43 1072 aa7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 DZIP1LQ8IYY4 767 aaKnown RBP7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 CSRNP1Q96S65 589 aa7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P1-201ENST00000522557 A0A096LPE4 126 aa7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 A0A1W2PPZ6 126 aa7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 TREHO43280 583 aa7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 H2AFB2P0C5Z0 115 aa7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 ESRRAP11474 423 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 MAPK1P28482 360 aa7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 ALKBH8Q96BT7 664 aaKnown RBP7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 DNAJC25Q9H1X3 360 aa7.93□□□□□ -1.14
HMGB1P1-201ENST00000522557 ARL4DP49703 201 aa7.92□□□□□ -1.14
HMGB1P1-201ENST00000522557 ZNF423Q2M1K9 1284 aa7.92□□□□□ -1.14
HMGB1P1-201ENST00000522557 Q6ZS46 218 aa7.92□□□□□ -1.14
HMGB1P1-201ENST00000522557 EPS8L3Q8TE67 593 aaKnown RBP7.92□□□□□ -1.14
HMGB1P1-201ENST00000522557 BCL2L13Q9BXK5 485 aa7.92□□□□□ -1.14
HMGB1P1-201ENST00000522557 EHD4Q9H223 541 aa7.92□□□□□ -1.14
HMGB1P1-201ENST00000522557 PLCB3Q01970 1234 aa7.91□□□□□ -1.14
HMGB1P1-201ENST00000522557 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
HMGB1P1-201ENST00000522557 GADD45BO75293 160 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P1-201ENST00000522557 TAGLNQ01995 201 aaKnown RBP7.9□□□□□ -1.14
HMGB1P1-201ENST00000522557 PI16Q6UXB8 463 aa7.9□□□□□ -1.14
HMGB1P1-201ENST00000522557 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
HMGB1P1-201ENST00000522557 P4HBP07237 508 aaKnown RBP7.89□□□□□ -1.15
HMGB1P1-201ENST00000522557 GSTM4Q03013 218 aa7.89□□□□□ -1.15
HMGB1P1-201ENST00000522557 PCDH1Q08174 1060 aa7.89□□□□□ -1.15
HMGB1P1-201ENST00000522557 MRRFQ96E11 262 aaKnown RBP7.89□□□□□ -1.15
HMGB1P1-201ENST00000522557 CLEC4MQ9H2X3 399 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P1-201ENST00000522557 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 DLGAP3O95886 979 aa7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 PRR23CQ6ZRP0 262 aa7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 ZSCAN29Q8IWY8 852 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 USP26Q9BXU7 913 aa7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 SOX17Q9H6I2 414 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P1-201ENST00000522557 RECKO95980 971 aa7.87□□□□□ -1.15
HMGB1P1-201ENST00000522557 ITPKAP23677 461 aa7.87□□□□□ -1.15
HMGB1P1-201ENST00000522557 MRPL58Q14197 206 aaKnown RBP7.87□□□□□ -1.15
HMGB1P1-201ENST00000522557 GRM2Q14416 872 aa7.87□□□□□ -1.15
HMGB1P1-201ENST00000522557 ARMC10Q8N2F6 343 aa7.87□□□□□ -1.15
HMGB1P1-201ENST00000522557 GLIS3Q8NEA6 775 aa7.87□□□□□ -1.15
HMGB1P1-201ENST00000522557 ABCB6Q9NP58 842 aa7.87□□□□□ -1.15
HMGB1P1-201ENST00000522557 PNMA6FA0A0J9YX94 578 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms