RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 CUL9Q8IWT3 2517 aa11.51□□□□□ -0.57
MRPS28-207ENST00000521434 COL6A3P12111 3177 aa11.51□□□□□ -0.57
MRPS28-207ENST00000521434 CCT4P50991 539 aaKnown RBP11.5□□□□□ -0.57
MRPS28-207ENST00000521434 SP3Q02447 781 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 NEUROD2Q15784 382 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 KIAA0825Q8IV33 1275 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 JARID2Q92833 1246 aaPredicted RBP11.5□□□□□ -0.57
MRPS28-207ENST00000521434 CLMNQ96JQ2 1002 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 MYD88Q99836 296 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 BSDC1Q9NW68 430 aaPredicted RBP11.5□□□□□ -0.57
MRPS28-207ENST00000521434 CWC25Q9NXE8 425 aaPredicted RBP11.5□□□□□ -0.57
MRPS28-207ENST00000521434 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.5□□□□□ -0.57
MRPS28-207ENST00000521434 MINPP1Q9UNW1 487 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 SSC5DA1L4H1 1573 aa11.5□□□□□ -0.57
MRPS28-207ENST00000521434 CTSWP56202 376 aa11.49□□□□□ -0.57
MRPS28-207ENST00000521434 ZNF333Q96JL9 665 aa11.49□□□□□ -0.57
MRPS28-207ENST00000521434 PPP2R3BQ9Y5P8 575 aa11.49□□□□□ -0.57
MRPS28-207ENST00000521434 OTOFQ9HC10 1997 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 ARHGEF6Q15052 776 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 DLGAP5Q15398 846 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 SUPT20HL1Q3ZLR7 823 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 NBPF11Q86T75 865 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 TXNRD3Q86VQ6 643 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
MRPS28-207ENST00000521434 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 LEMD3Q9Y2U8 911 aa11.48□□□□□ -0.57
MRPS28-207ENST00000521434 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-207ENST00000521434 H0YGN5 161 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 GJA5P36382 358 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
MRPS28-207ENST00000521434 GTF2IP78347 998 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 CAP1Q01518 475 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 SLC9C1Q4G0N8 1177 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 TTLL11Q8NHH1 800 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 OTUD5Q96G74 571 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 PTPN18Q99952 460 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 METTL22Q9BUU2 404 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-207ENST00000521434 GREM2Q9H772 168 aa11.47□□□□□ -0.57
MRPS28-207ENST00000521434 ZNF804BA4D1E1 1349 aa11.46□□□□□ -0.57
MRPS28-207ENST00000521434 MYO1BO43795 1136 aa11.46□□□□□ -0.57
MRPS28-207ENST00000521434 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
MRPS28-207ENST00000521434 ANKRD13AQ8IZ07 590 aa11.46□□□□□ -0.57
MRPS28-207ENST00000521434 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
MRPS28-207ENST00000521434 USP2O75604 605 aaPredicted RBP11.45□□□□□ -0.58
MRPS28-207ENST00000521434 DDX58O95786 925 aaKnown RBP11.45□□□□□ -0.58
MRPS28-207ENST00000521434 KLRK1P26718 216 aa11.45□□□□□ -0.58
MRPS28-207ENST00000521434 IGHMBP2P38935 993 aaKnown RBP11.45□□□□□ -0.58
MRPS28-207ENST00000521434 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
MRPS28-207ENST00000521434 MBIPQ9NS73 344 aa11.45□□□□□ -0.58
MRPS28-207ENST00000521434 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
MRPS28-207ENST00000521434 NBPF12Q5TAG4 269 aaPredicted RBP11.44□□□□□ -0.58
MRPS28-207ENST00000521434 RUNDC1Q96C34 613 aa11.44□□□□□ -0.58
MRPS28-207ENST00000521434 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
MRPS28-207ENST00000521434 CLRN2A0PK11 232 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 DLL1O00548 723 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-207ENST00000521434 KCNJ4P48050 445 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 TAF1CQ15572 869 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-207ENST00000521434 CFAP100Q494V2 611 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 CERS5Q8N5B7 392 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 OPTNQ96CV9 577 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 PRMT6Q96LA8 375 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-207ENST00000521434 VEZTQ9HBM0 779 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 ZFYVE28Q9HCC9 887 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 PCDHAC2Q9Y5I4 1007 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 ZSWIM8A7E2V4 1837 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 A0A1B0GUL6 1792 aa11.43□□□□□ -0.58
MRPS28-207ENST00000521434 ELL2O00472 640 aaPredicted RBP11.42□□□□□ -0.58
MRPS28-207ENST00000521434 IGKV5-2P06315 115 aa11.42□□□□□ -0.58
MRPS28-207ENST00000521434 RASA3Q14644 834 aa11.42□□□□□ -0.58
MRPS28-207ENST00000521434 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
MRPS28-207ENST00000521434 SLC17A8Q8NDX2 589 aa11.42□□□□□ -0.58
MRPS28-207ENST00000521434 MPHOSPH8Q99549 860 aa11.42□□□□□ -0.58
MRPS28-207ENST00000521434 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
MRPS28-207ENST00000521434 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
MRPS28-207ENST00000521434 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 F8W031 263 aaPredicted RBP11.41□□□□□ -0.58
MRPS28-207ENST00000521434 ZNF853P0CG23 659 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 GTF2A2P52657 109 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
MRPS28-207ENST00000521434 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 RALBP1Q15311 655 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 KSR2Q6VAB6 950 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 SH3TC2Q8TF17 1288 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 BRI3BPQ8WY22 251 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 DPF3Q92784 378 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 CHMP4AQ9BY43 222 aa11.41□□□□□ -0.58
MRPS28-207ENST00000521434 ARAP2Q8WZ64 1704 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 AOX1Q06278 1338 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 IRS2Q9Y4H2 1338 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 LAMA3Q16787 3333 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 CCL15-CCL14A0A0B4J2E2 113 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 H7C1W4 665 aa11.4□□□□□ -0.58
MRPS28-207ENST00000521434 WDHD1O75717 1129 aaPredicted RBP11.4□□□□□ -0.58
MRPS28-207ENST00000521434 ITGA6P23229 1130 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms