RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 BAG6P46379 1132 aa8.69□□□□□ -1.02
SKP1-208ENST00000521216 COL9A3Q14050 684 aaPredicted RBP8.69□□□□□ -1.02
SKP1-208ENST00000521216 FAM117BQ6P1L5 589 aa8.69□□□□□ -1.02
SKP1-208ENST00000521216 LINC00114Q6XXX2 140 aa8.69□□□□□ -1.02
SKP1-208ENST00000521216 SLC7A3Q8WY07 619 aa8.69□□□□□ -1.02
SKP1-208ENST00000521216 PIK3R2O00459 728 aa8.68□□□□□ -1.02
SKP1-208ENST00000521216 ITGAEP38570 1179 aa8.68□□□□□ -1.02
SKP1-208ENST00000521216 MRRFQ96E11 262 aaKnown RBP8.68□□□□□ -1.02
SKP1-208ENST00000521216 TRIM11Q96F44 468 aa8.68□□□□□ -1.02
SKP1-208ENST00000521216 SOX13Q9UN79 622 aa8.68□□□□□ -1.02
SKP1-208ENST00000521216 UNCXA6NJT0 531 aa8.67□□□□□ -1.02
SKP1-208ENST00000521216 ZNF157P51786 506 aaPredicted RBP8.67□□□□□ -1.02
SKP1-208ENST00000521216 IKBKEQ14164 716 aa8.67□□□□□ -1.02
SKP1-208ENST00000521216 VN1R5Q7Z5H4 357 aa8.67□□□□□ -1.02
SKP1-208ENST00000521216 SCARF2Q96GP6 870 aaPredicted RBP8.67□□□□□ -1.02
SKP1-208ENST00000521216 CLEC4MQ9H2X3 399 aaPredicted RBP8.67□□□□□ -1.02
SKP1-208ENST00000521216 SPDYE3A6NKU9 549 aa8.66□□□□□ -1.02
SKP1-208ENST00000521216 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
SKP1-208ENST00000521216 H3BRJ5 948 aa8.66□□□□□ -1.02
SKP1-208ENST00000521216 XRCC5P13010 732 aaKnown RBP8.66□□□□□ -1.02
SKP1-208ENST00000521216 ITPKAP23677 461 aa8.66□□□□□ -1.02
SKP1-208ENST00000521216 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
SKP1-208ENST00000521216 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
SKP1-208ENST00000521216 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
SKP1-208ENST00000521216 RAC1P63000 192 aa8.65□□□□□ -1.02
SKP1-208ENST00000521216 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
SKP1-208ENST00000521216 ZFYVE1Q9HBF4 777 aa8.65□□□□□ -1.02
SKP1-208ENST00000521216 GPN3Q9UHW5 284 aaPredicted RBP8.65□□□□□ -1.02
SKP1-208ENST00000521216 TTF2Q9UNY4 1162 aaKnown RBP8.65□□□□□ -1.02
SKP1-208ENST00000521216 SOX1O00570 391 aaPredicted RBP8.64□□□□□ -1.03
SKP1-208ENST00000521216 FBXO24O75426 580 aa8.64□□□□□ -1.03
SKP1-208ENST00000521216 ARL4DP49703 201 aa8.64□□□□□ -1.03
SKP1-208ENST00000521216 ZNF423Q2M1K9 1284 aa8.64□□□□□ -1.03
SKP1-208ENST00000521216 TSNAXIP1Q2TAA8 658 aa8.64□□□□□ -1.03
SKP1-208ENST00000521216 TPTE2Q6XPS3 522 aa8.64□□□□□ -1.03
SKP1-208ENST00000521216 C3orf58Q8NDZ4 430 aa8.64□□□□□ -1.03
SKP1-208ENST00000521216 NOP53Q9NZM5 478 aaKnown RBP8.64□□□□□ -1.03
SKP1-208ENST00000521216 A0A0A0MRY4 1105 aa8.63□□□□□ -1.03
SKP1-208ENST00000521216 FSCN2O14926 492 aa8.63□□□□□ -1.03
SKP1-208ENST00000521216 ESRRAP11474 423 aaPredicted RBP8.63□□□□□ -1.03
SKP1-208ENST00000521216 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
SKP1-208ENST00000521216 PRRT3Q5FWE3 981 aa8.63□□□□□ -1.03
SKP1-208ENST00000521216 MEI1Q5TIA1 1274 aa8.63□□□□□ -1.03
SKP1-208ENST00000521216 HGSNATQ68CP4 663 aa8.63□□□□□ -1.03
SKP1-208ENST00000521216 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
SKP1-208ENST00000521216 CTSHP09668 335 aa8.62□□□□□ -1.03
SKP1-208ENST00000521216 PIP4K2BP78356 416 aa8.62□□□□□ -1.03
SKP1-208ENST00000521216 GSTM4Q03013 218 aa8.62□□□□□ -1.03
SKP1-208ENST00000521216 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
SKP1-208ENST00000521216 MRPL58Q14197 206 aaKnown RBP8.62□□□□□ -1.03
SKP1-208ENST00000521216 SETDB1Q15047 1291 aa8.62□□□□□ -1.03
SKP1-208ENST00000521216 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
SKP1-208ENST00000521216 BACH2Q9BYV9 841 aa8.62□□□□□ -1.03
SKP1-208ENST00000521216 KIAA1522Q9P206 1035 aaPredicted RBP8.62□□□□□ -1.03
SKP1-208ENST00000521216 C19orf57Q0VDD7 668 aa8.61□□□□□ -1.03
SKP1-208ENST00000521216 RPS26P11Q5JNZ5 115 aaPredicted RBP8.61□□□□□ -1.03
SKP1-208ENST00000521216 KLHDC7BQ96G42 594 aa8.61□□□□□ -1.03
SKP1-208ENST00000521216 CRELD1Q96HD1 420 aa8.61□□□□□ -1.03
SKP1-208ENST00000521216 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
SKP1-208ENST00000521216 DEAF1O75398 565 aaPredicted RBP8.6□□□□□ -1.03
SKP1-208ENST00000521216 TAF1CQ15572 869 aaPredicted RBP8.6□□□□□ -1.03
SKP1-208ENST00000521216 FBXO11Q86XK2 927 aa8.6□□□□□ -1.03
SKP1-208ENST00000521216 MAP4K3Q8IVH8 894 aa8.6□□□□□ -1.03
SKP1-208ENST00000521216 FMR1NBQ8N0W7 255 aaPredicted RBP8.6□□□□□ -1.03
SKP1-208ENST00000521216 DTWD1Q8N5C7 304 aa8.6□□□□□ -1.03
SKP1-208ENST00000521216 GALNT11Q8NCW6 608 aa8.6□□□□□ -1.03
SKP1-208ENST00000521216 DDX54Q8TDD1 881 aaKnown RBP8.6□□□□□ -1.03
SKP1-208ENST00000521216 E9PSI1 815 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 DDX3YO15523 660 aaKnown RBP8.59□□□□□ -1.03
SKP1-208ENST00000521216 B3GALT4O96024 378 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 NLRP12P59046 1061 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 PPP2R3AQ06190 1150 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 CCDC85BQ15834 202 aaPredicted RBP8.59□□□□□ -1.03
SKP1-208ENST00000521216 KLHL23Q8NBE8 558 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 WNT8BQ93098 351 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 CEP44Q9C0F1 390 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 TMEM39AQ9NV64 488 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 PPM1HQ9ULR3 514 aa8.59□□□□□ -1.03
SKP1-208ENST00000521216 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
SKP1-208ENST00000521216 SUZ12Q15022 739 aaKnown RBP8.58□□□□□ -1.04
SKP1-208ENST00000521216 GRIK4Q16099 956 aa8.58□□□□□ -1.04
SKP1-208ENST00000521216 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
SKP1-208ENST00000521216 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
SKP1-208ENST00000521216 COL8A1P27658 744 aa8.57□□□□□ -1.04
SKP1-208ENST00000521216 MAP3K11Q16584 847 aa8.57□□□□□ -1.04
SKP1-208ENST00000521216 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
SKP1-208ENST00000521216 USP26Q9BXU7 913 aa8.57□□□□□ -1.04
SKP1-208ENST00000521216 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
SKP1-208ENST00000521216 RECKO95980 971 aa8.56□□□□□ -1.04
SKP1-208ENST00000521216 CELA3AP09093 270 aa8.56□□□□□ -1.04
SKP1-208ENST00000521216 ELNP15502 786 aa8.56□□□□□ -1.04
SKP1-208ENST00000521216 NPM2Q86SE8 214 aaKnown RBP8.56□□□□□ -1.04
SKP1-208ENST00000521216 NECAB3Q96P71 396 aaPredicted RBP8.56□□□□□ -1.04
SKP1-208ENST00000521216 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
SKP1-208ENST00000521216 CBX8Q9HC52 389 aa8.56□□□□□ -1.04
SKP1-208ENST00000521216 KCNK4Q9NYG8 393 aa8.56□□□□□ -1.04
SKP1-208ENST00000521216 RNF225M0QZC1 329 aaPredicted RBP8.55□□□□□ -1.04
SKP1-208ENST00000521216 SPATA31C1P0DKV0 1188 aa8.55□□□□□ -1.04
SKP1-208ENST00000521216 VAMP1P23763 118 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms