RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	CWC25	Q9NXE8	425 aa	Predicted RBP	10.45	□□□□□ -0.74
PTK2-223	ENST00000520828	MINPP1	Q9UNW1	487 aa		10.45	□□□□□ -0.74
PTK2-223	ENST00000520828	PTCH2	Q9Y6C5	1203 aa		10.45	□□□□□ -0.74
PTK2-223	ENST00000520828	KIAA0100	Q14667	2235 aa	Known RBP	10.44	□□□□□ -0.74
PTK2-223	ENST00000520828	TESPA1	A2RU30	521 aa	Predicted RBP	10.44	□□□□□ -0.74
PTK2-223	ENST00000520828	MYO1B	O43795	1136 aa		10.44	□□□□□ -0.74
PTK2-223	ENST00000520828	GJA5	P36382	358 aa		10.44	□□□□□ -0.74
PTK2-223	ENST00000520828	JARID2	Q92833	1246 aa	Predicted RBP	10.44	□□□□□ -0.74
PTK2-223	ENST00000520828	PTPN18	Q99952	460 aa		10.44	□□□□□ -0.74
PTK2-223	ENST00000520828	BSDC1	Q9NW68	430 aa	Predicted RBP	10.44	□□□□□ -0.74
PTK2-223	ENST00000520828	SSC5D	A1L4H1	1573 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	ZNF804B	A4D1E1	1349 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	GTF2I	P78347	998 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	CAP1	Q01518	475 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	NEUROD2	Q15784	382 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	ANKRD13A	Q8IZ07	590 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	DPF3	Q92784	378 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	ZFYVE28	Q9HCC9	887 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	RBM27	Q9P2N5	1060 aa	Known RBP	10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	LEMD3	Q9Y2U8	911 aa		10.43	□□□□□ -0.74
PTK2-223	ENST00000520828	CTSW	P56202	376 aa		10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	TAF1C	Q15572	869 aa	Predicted RBP	10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	DUSP27	Q5VZP5	1158 aa		10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	TXNRD3	Q86VQ6	643 aa		10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	MTMR14	Q8NCE2	650 aa		10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	OPTN	Q96CV9	577 aa		10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	ELP3	Q9H9T3	547 aa		10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	VEZT	Q9HBM0	779 aa		10.42	□□□□□ -0.74
PTK2-223	ENST00000520828	TRIOBP	Q9H2D6	2365 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	BRCA2	P51587	3418 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	CLRN2	A0PK11	232 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	USP2	O75604	605 aa	Predicted RBP	10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	WDHD1	O75717	1129 aa	Predicted RBP	10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	PRKAR2A	P13861	404 aa	Known RBP	10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	IGHMBP2	P38935	993 aa	Known RBP	10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	KCNJ4	P48050	445 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	KIF22	Q14807	665 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	TTLL11	Q8NHH1	800 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	SH3TC2	Q8TF17	1288 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	ANKRD2	Q9GZV1	360 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	GREM2	Q9H772	168 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	ZNF646	O15015	1829 aa	Predicted RBP	10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	LAMB1	P07942	1786 aa		10.41	□□□□□ -0.74
PTK2-223	ENST00000520828	CCL15-CCL14	A0A0B4J2E2	113 aa		10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	DDX58	O95786	925 aa	Known RBP	10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	GTF2A2	P52657	109 aa		10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	CCL15	Q16663	113 aa		10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	CFAP100	Q494V2	611 aa		10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	BRI3BP	Q8WY22	251 aa		10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	MS4A4A	Q96JQ5	239 aa		10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	METTL22	Q9BUU2	404 aa	Predicted RBP	10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	PHAX	Q9H814	394 aa	Known RBP	10.4	□□□□□ -0.74
PTK2-223	ENST00000520828	SZT2	Q5T011	3432 aa		10.4	□□□□□ -0.75
PTK2-223	ENST00000520828	CEP290	O15078	2479 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828		F8W031	263 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	GNRH1	P01148	92 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	KLRK1	P26718	216 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	PRMT2	P55345	433 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	RASA3	Q14644	834 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	CERS5	Q8N5B7	392 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	PRMT6	Q96LA8	375 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	HTATIP2	Q9BUP3	242 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	CD209	Q9NNX6	404 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	TRIM35	Q9UPQ4	493 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	PCDHAC2	Q9Y5I4	1007 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	NR2E3	Q9Y5X4	410 aa		10.39	□□□□□ -0.75
PTK2-223	ENST00000520828	RBM5	P52756	815 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
PTK2-223	ENST00000520828	TNFAIP1	Q13829	316 aa		10.38	□□□□□ -0.75
PTK2-223	ENST00000520828	CCDC146	Q8IYE0	955 aa		10.38	□□□□□ -0.75
PTK2-223	ENST00000520828	NKX2-3	Q8TAU0	364 aa		10.38	□□□□□ -0.75
PTK2-223	ENST00000520828	SHISA4	Q96DD7	197 aa		10.38	□□□□□ -0.75
PTK2-223	ENST00000520828	MPHOSPH8	Q99549	860 aa		10.38	□□□□□ -0.75
PTK2-223	ENST00000520828		A0A1W2PPC1	479 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	TLR2	O60603	784 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	MNX1	P50219	401 aa	Predicted RBP	10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	LACTB	P83111	547 aa	Predicted RBP	10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	FAM43A	Q8N2R8	423 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	ARHGAP39	Q9C0H5	1083 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	PRO3102	Q9H379	93 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	MBIP	Q9NS73	344 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	MAP3K2	Q9Y2U5	619 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	CSAD	Q9Y600	493 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828		A0A0C4DFX4	3053 aa		10.37	□□□□□ -0.75
PTK2-223	ENST00000520828	AOX1	Q06278	1338 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	SPEF2	Q9C093	1822 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	CETP	P11597	493 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	FKBP1A	P62942	108 aa	Known RBP	10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	MAP3K9	P80192	1104 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	EVX2	Q03828	476 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	NEXN	Q0ZGT2	675 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	VGLL4	Q14135	290 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	MTFR1	Q15390	333 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	RUNDC1	Q96C34	613 aa		10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	ZCCHC17	Q9NP64	241 aa	Known RBP	10.36	□□□□□ -0.75
PTK2-223	ENST00000520828	RANBP2	P49792	3224 aa	Known RBP	10.35	□□□□□ -0.75
PTK2-223	ENST00000520828	ELL2	O00472	640 aa	Predicted RBP	10.35	□□□□□ -0.75
PTK2-223	ENST00000520828	ZBTB7B	O15156	539 aa	Predicted RBP	10.35	□□□□□ -0.75
PTK2-223	ENST00000520828	IGKV5-2	P06315	115 aa		10.35	□□□□□ -0.75

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