RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PIK3R2O00459 728 aa7.45□□□□□ -1.22
SQLE-202ENST00000518604 ARHGEF15O94989 841 aa7.45□□□□□ -1.22
SQLE-202ENST00000518604 LDLRAD1Q5T700 205 aa7.45□□□□□ -1.22
SQLE-202ENST00000518604 GDF6Q6KF10 455 aaPredicted RBP7.45□□□□□ -1.22
SQLE-202ENST00000518604 CEP44Q9C0F1 390 aa7.45□□□□□ -1.22
SQLE-202ENST00000518604 CLEC4MQ9H2X3 399 aaPredicted RBP7.45□□□□□ -1.22
SQLE-202ENST00000518604 ZNF576Q9H609 170 aa7.45□□□□□ -1.22
SQLE-202ENST00000518604 PPME1Q9Y570 386 aa7.45□□□□□ -1.22
SQLE-202ENST00000518604 METTL12A8MUP2 240 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 DGKGP49619 791 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 MSL1Q68DK7 614 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 WFDC8Q8IUA0 241 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 WNT8BQ93098 351 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 LACRTQ9GZZ8 138 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 SRA1Q9HD15 236 aaKnown RBP7.44□□□□□ -1.22
SQLE-202ENST00000518604 AKAP2Q9Y2D5 859 aa7.44□□□□□ -1.22
SQLE-202ENST00000518604 H3BRJ5 948 aa7.43□□□□□ -1.22
SQLE-202ENST00000518604 BAG6P46379 1132 aa7.43□□□□□ -1.22
SQLE-202ENST00000518604 FAM117BQ6P1L5 589 aa7.43□□□□□ -1.22
SQLE-202ENST00000518604 ILDR2Q71H61 639 aa7.43□□□□□ -1.22
SQLE-202ENST00000518604 VN1R5Q7Z5H4 357 aa7.43□□□□□ -1.22
SQLE-202ENST00000518604 MAP4K3Q8IVH8 894 aa7.43□□□□□ -1.22
SQLE-202ENST00000518604 DDX54Q8TDD1 881 aaKnown RBP7.43□□□□□ -1.22
SQLE-202ENST00000518604 NOC4LQ9BVI4 516 aaKnown RBP7.43□□□□□ -1.22
SQLE-202ENST00000518604 IGSF5Q9NSI5 407 aa7.43□□□□□ -1.22
SQLE-202ENST00000518604 RLBP1P12271 317 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 NID1P14543 1247 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 TCF3P15923 654 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 HOXB4P17483 251 aaPredicted RBP7.42□□□□□ -1.22
SQLE-202ENST00000518604 PCDH1Q08174 1060 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 COL9A3Q14050 684 aaPredicted RBP7.42□□□□□ -1.22
SQLE-202ENST00000518604 SV2BQ7L1I2 683 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 DTWD1Q8N5C7 304 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 ZSCAN1Q8NBB4 408 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 DCAF11Q8TEB1 546 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 SOX17Q9H6I2 414 aaPredicted RBP7.42□□□□□ -1.22
SQLE-202ENST00000518604 RRAGCQ9HB90 399 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 OSGEPQ9NPF4 335 aa7.42□□□□□ -1.22
SQLE-202ENST00000518604 SH2B1Q9NRF2 756 aaPredicted RBP7.42□□□□□ -1.22
SQLE-202ENST00000518604 TTF2Q9UNY4 1162 aaKnown RBP7.42□□□□□ -1.22
SQLE-202ENST00000518604 B3GALT4O96024 378 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 ESRRAP11474 423 aaPredicted RBP7.41□□□□□ -1.22
SQLE-202ENST00000518604 EPHA1P21709 976 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 RANGAP1P46060 587 aaPredicted RBP7.41□□□□□ -1.22
SQLE-202ENST00000518604 ARL4DP49703 201 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 PIP4K2BP78356 416 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 PPP2R3AQ06190 1150 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 IKBKEQ14164 716 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 ADAMTSL4Q6UY14 1074 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 C8orf86Q6ZUL3 223 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 RNF34Q969K3 372 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 SEC31BQ9NQW1 1179 aa7.41□□□□□ -1.22
SQLE-202ENST00000518604 FAM181BA6NEQ2 426 aa7.4□□□□□ -1.22
SQLE-202ENST00000518604 SPDYE3A6NKU9 549 aa7.4□□□□□ -1.22
SQLE-202ENST00000518604 ZNF76P36508 570 aa7.4□□□□□ -1.22
SQLE-202ENST00000518604 SUZ12Q15022 739 aaKnown RBP7.4□□□□□ -1.22
SQLE-202ENST00000518604 ZNF423Q2M1K9 1284 aa7.4□□□□□ -1.22
SQLE-202ENST00000518604 MEI1Q5TIA1 1274 aa7.4□□□□□ -1.22
SQLE-202ENST00000518604 NECAB3Q96P71 396 aaPredicted RBP7.4□□□□□ -1.22
SQLE-202ENST00000518604 TMEM39AQ9NV64 488 aa7.4□□□□□ -1.22
SQLE-202ENST00000518604 MKL2Q9ULH7 1088 aa7.4□□□□□ -1.22
SQLE-202ENST00000518604 SOX1O00570 391 aaPredicted RBP7.39□□□□□ -1.23
SQLE-202ENST00000518604 GNB5O14775 395 aa7.39□□□□□ -1.23
SQLE-202ENST00000518604 FANCCQ00597 558 aa7.39□□□□□ -1.23
SQLE-202ENST00000518604 CCDC85BQ15834 202 aaPredicted RBP7.39□□□□□ -1.23
SQLE-202ENST00000518604 LINC00114Q6XXX2 140 aa7.39□□□□□ -1.23
SQLE-202ENST00000518604 BEND7Q8N7W2 519 aaPredicted RBP7.39□□□□□ -1.23
SQLE-202ENST00000518604 KLHL23Q8NBE8 558 aa7.39□□□□□ -1.23
SQLE-202ENST00000518604 SAMM50Q9Y512 469 aa7.39□□□□□ -1.23
SQLE-202ENST00000518604 LINC01387J3KSC0 135 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 FSCN2O14926 492 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 C19orf57Q0VDD7 668 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 FAAP100Q0VG06 881 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 PWP1Q13610 501 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 TRAPPC3LQ5T215 181 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 HS2ST1Q7LGA3 356 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 PODNQ7Z5L7 613 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 DMRTC2Q8IXT2 367 aaPredicted RBP7.38□□□□□ -1.23
SQLE-202ENST00000518604 RSRP1Q9BUV0 290 aa7.38□□□□□ -1.23
SQLE-202ENST00000518604 RAC1P63000 192 aa7.37□□□□□ -1.23
SQLE-202ENST00000518604 TPTE2Q6XPS3 522 aa7.37□□□□□ -1.23
SQLE-202ENST00000518604 NOP53Q9NZM5 478 aaKnown RBP7.37□□□□□ -1.23
SQLE-202ENST00000518604 GPN3Q9UHW5 284 aaPredicted RBP7.37□□□□□ -1.23
SQLE-202ENST00000518604 ENC1O14682 589 aa7.36□□□□□ -1.23
SQLE-202ENST00000518604 RPS26P62854 115 aaKnown RBP7.36□□□□□ -1.23
SQLE-202ENST00000518604 SNRPNP63162 240 aaKnown RBP7.36□□□□□ -1.23
SQLE-202ENST00000518604 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
SQLE-202ENST00000518604 AP3B2Q13367 1082 aa7.36□□□□□ -1.23
SQLE-202ENST00000518604 SETDB1Q15047 1291 aa7.36□□□□□ -1.23
SQLE-202ENST00000518604 METTL16Q86W50 562 aaKnown RBP7.36□□□□□ -1.23
SQLE-202ENST00000518604 EMILIN2Q9BXX0 1053 aa7.36□□□□□ -1.23
SQLE-202ENST00000518604 ADAMTS8Q9UP79 889 aa7.36□□□□□ -1.23
SQLE-202ENST00000518604 CYP11A1P05108 521 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 NME2P22392 152 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 SCARA3Q6AZY7 606 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 ERMP1Q7Z2K6 904 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 FBXO11Q86XK2 927 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 RELL1Q8IUW5 271 aa7.35□□□□□ -1.23
SQLE-202ENST00000518604 TRIM11Q96F44 468 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms