RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 SCUBE3Q8IX30 993 aa7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 FRAT1Q92837 279 aaPredicted RBP7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 METTL22Q9BUU2 404 aaPredicted RBP7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 UTP14AQ9BVJ6 771 aaKnown RBP7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 FKBPLQ9UIM3 349 aa7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NOB1Q9ULX3 412 aaKnown RBP7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 CICQ96RK0 1608 aaPredicted RBP7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TMEM88BA6NKF7 163 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PPP4CP60510 307 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ST5P78524 1137 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PARP10Q53GL7 1025 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PRR5LQ6MZQ0 368 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NLRP10Q86W26 655 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 CNBD1Q8NA66 436 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 DNAAF4Q8WXU2 420 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 JARID2Q92833 1246 aaPredicted RBP7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 SYT17Q9BSW7 474 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ISCA1Q9BUE6 129 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 FHDC1Q9C0D6 1143 aaPredicted RBP7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NYXQ9GZU5 481 aa7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TRMT112Q9UI30 125 aaKnown RBP7.34□□□□□ -1.23
SCARNA6.1-201ENST00000516989 CARMIL3Q8ND23 1372 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PIK3CDO00329 1044 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 IPO8O15397 1037 aaKnown RBP7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 FMNL1O95466 1100 aaPredicted RBP7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 TRIM28Q13263 835 aaKnown RBP7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CWF19L2Q2TBE0 894 aaKnown RBP7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ERFEQ4G0M1 354 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 FAM89AQ96GI7 184 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 API5Q9BZZ5 524 aaKnown RBP7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CWC25Q9NXE8 425 aaPredicted RBP7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 WWC3Q9ULE0 1092 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CD2APQ9Y5K6 639 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 TUBGCP6Q96RT7 1819 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 LAMB4A4D0S4 1761 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CASZ1Q86V15 1759 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ADCY9O60503 1353 aa7.33□□□□□ -1.24
SCARNA6.1-201ENST00000516989 QSER1Q2KHR3 1735 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PTPRCP08575 1304 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 UBN2Q6ZU65 1347 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 A0A0G2JLW4 131 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 H0YIN7 160 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 NR1I2O75469 434 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 F12P00748 615 aaPredicted RBP7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 IGKV5-2P06315 115 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CHRNA5P30532 468 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PDE6BP35913 854 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 APLP1P51693 650 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 TGFB2P61812 414 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ZKSCAN2Q63HK3 967 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ADGRD1Q6QNK2 874 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 C2CD5Q86YS7 1000 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 SYNE4Q8N205 404 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CCDC191Q8NCU4 936 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 NLGN2Q8NFZ4 835 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ZNF622Q969S3 477 aaKnown RBP eCLIP7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 THAP11Q96EK4 314 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 BRIP1Q9BX63 1249 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 SRCIN1Q9C0H9 1055 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 C9orf78Q9NZ63 289 aaPredicted RBP7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 MAP10Q9P2G4 905 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 RCAN3Q9UKA8 241 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 HPS5Q9UPZ3 1129 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
SCARNA6.1-201ENST00000516989 SH3TC1Q8TE82 1336 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 GOLGA8CPA6NN73 597 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 NEURL1BA8MQ27 555 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 NTSR2O95665 410 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 SKIP12755 728 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 HCLS1P14317 486 aaPredicted RBP7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 DPEP1P16444 411 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 JUNDP17535 347 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 CTHP32929 405 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PTPRNQ16849 979 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 SLC10A5Q5PT55 438 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 BEND3Q5T5X7 828 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 FOXD4L5Q5VV16 416 aaPredicted RBP7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ZBTB38Q8NAP3 1195 aaPredicted RBP7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 LINS1Q8NG48 757 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 FOXD4L4Q8WXT5 416 aaPredicted RBP7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ARHGAP45Q92619 1136 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 NLRP3Q96P20 1036 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ATP10DQ9P241 1426 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PCDHB3Q9Y5E6 796 aa7.31□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ZC3H4Q9UPT8 1303 aaKnown RBP7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 SOWAHBA6NEL2 793 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 H7C1W4 665 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 IRS4O14654 1257 aaPredicted RBP7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 HRO43593 1189 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ALDH1L1O75891 902 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 HSP90B1P14625 803 aaKnown RBP7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 LSM11P83369 360 aaKnown RBP eCLIP7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ELOAQ14241 798 aaKnown RBP7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 GCKRQ14397 625 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 GPR162Q16538 588 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 ATF7IPQ6VMQ6 1270 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 UBE3BQ7Z3V4 1068 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 PDZRN3Q9UPQ7 1066 aa7.3□□□□□ -1.24
SCARNA6.1-201ENST00000516989 C4AP0C0L4 1744 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms