RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 FOXD3Q9UJU5 478 aaPredicted RBP5.95□□□□□ -1.46
RNU4-49P-201ENST00000516080 MEGF11A6BM72 1044 aa5.94□□□□□ -1.46
RNU4-49P-201ENST00000516080 RUSC1Q9BVN2 902 aa5.94□□□□□ -1.46
RNU4-49P-201ENST00000516080 SOX17Q9H6I2 414 aaPredicted RBP5.94□□□□□ -1.46
RNU4-49P-201ENST00000516080 ZFYVE28Q9HCC9 887 aa5.94□□□□□ -1.46
RNU4-49P-201ENST00000516080 SOX1O00570 391 aaPredicted RBP5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 NEFLP07196 543 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 FDX2Q6P4F2 183 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 VN1R5Q7Z5H4 357 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 CLEC10AQ8IUN9 316 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 GLYCTKQ8IVS8 523 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 FAM20CQ8IXL6 584 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 ASAP3Q8TDY4 903 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 PCMTD2Q9NV79 361 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 BRPF3Q9ULD4 1205 aa5.93□□□□□ -1.46
RNU4-49P-201ENST00000516080 PDE4CQ08493 712 aa5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 NFIAQ12857 509 aa5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 PEAR1Q5VY43 1037 aaPredicted RBP5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 RNF43Q68DV7 783 aa5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 TRIM42Q8IWZ5 723 aa5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 C7orf69Q9H7B7 122 aa5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 HIF3AQ9Y2N7 669 aa5.92□□□□□ -1.46
RNU4-49P-201ENST00000516080 H3BRB1 525 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 NDUFB5O43674 189 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 GAS2O43903 313 aaKnown RBP5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 BMP3P12645 472 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 PREPP48147 710 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 PDE3BQ13370 1112 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 NUTM2GQ5VZR2 741 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 HGSNATQ68CP4 663 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 FAM83CQ9BQN1 747 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 DBNDD2Q9BQY9 259 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 USP26Q9BXU7 913 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 TUT1Q9H6E5 874 aaKnown RBP5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 LATS2Q9NRM7 1088 aa5.91□□□□□ -1.46
RNU4-49P-201ENST00000516080 HMX2A2RU54 273 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 COBLO75128 1261 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 ESRRAP11474 423 aaPredicted RBP5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 SSTR4P31391 388 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 CD97P48960 835 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 BEND4Q6ZU67 534 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 GALNT12Q8IXK2 581 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 SMG8Q8ND04 991 aaKnown RBP5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 CITED4Q96RK1 184 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 TMPRSS13Q9BYE2 586 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 KCNF1Q9H3M0 494 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 SUGCTQ9HAC7 445 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 CYP4F12Q9HCS2 524 aa5.9□□□□□ -1.46
RNU4-49P-201ENST00000516080 LOC100289279A0A1B0GTE1 492 aa5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 A0A1W2PP55 124 aa5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 POLR3DP05423 398 aaPredicted RBP5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 GRIK1P39086 918 aa5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 SERPINB4P48594 390 aa5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 INTS5Q6P9B9 1019 aaKnown RBP5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 ZDHHC13Q8IUH4 622 aa5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 CCNJLQ8IV13 435 aa5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 C12orf50Q8NA57 414 aaPredicted RBP5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 PSMG3-AS1Q96PY0 264 aa5.89□□□□□ -1.47
RNU4-49P-201ENST00000516080 A0A096LPE4 126 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 A0A1W2PPZ6 126 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 ARHGAP4P98171 946 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 GSTM4Q03013 218 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 PCDH1Q08174 1060 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 ECM1Q16610 540 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 EXOSC6Q5RKV6 272 aaKnown RBP5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 DDX54Q8TDD1 881 aaKnown RBP5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 CLEC4MQ9H2X3 399 aaPredicted RBP5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 LIN7BQ9HAP6 207 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 ZFYVE1Q9HBF4 777 aa5.88□□□□□ -1.47
RNU4-49P-201ENST00000516080 METTL12A8MUP2 240 aa5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 KIAA1324LA8MWY0 1029 aaPredicted RBP5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 TIAF1O95411 115 aa5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 TGFB1P01137 390 aa5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 MAP4P27816 1152 aaKnown RBP5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 HP1BP3Q5SSJ5 553 aaPredicted RBP5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 KIAA0319Q5VV43 1072 aa5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 GIMAP7Q8NHV1 300 aa5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 TCF12Q99081 682 aa5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 ARID3AQ99856 593 aa5.87□□□□□ -1.47
RNU4-49P-201ENST00000516080 CPNE3O75131 537 aaKnown RBP5.86□□□□□ -1.47
RNU4-49P-201ENST00000516080 CYP11A1P05108 521 aa5.86□□□□□ -1.47
RNU4-49P-201ENST00000516080 RXRBP28702 533 aa5.86□□□□□ -1.47
RNU4-49P-201ENST00000516080 USP11P51784 963 aa5.86□□□□□ -1.47
RNU4-49P-201ENST00000516080 TXNDC2Q86VQ3 553 aa5.86□□□□□ -1.47
RNU4-49P-201ENST00000516080 CCER1Q8TC90 406 aaPredicted RBP5.86□□□□□ -1.47
RNU4-49P-201ENST00000516080 FAM129BQ96TA1 746 aa5.86□□□□□ -1.47
RNU4-49P-201ENST00000516080 DLGAP3O95886 979 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 GRIA4P48058 902 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 ZNF423Q2M1K9 1284 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 SPRED3Q2MJR0 410 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 SGO2Q562F6 1265 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 USPL1Q5W0Q7 1092 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 RETREG2Q8NC44 543 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 SHKBP1Q8TBC3 707 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 NRSN2Q9GZP1 204 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 DNAJC25Q9H1X3 360 aa5.85□□□□□ -1.47
RNU4-49P-201ENST00000516080 PRR19A6NJB7 356 aa5.84□□□□□ -1.47
RNU4-49P-201ENST00000516080 MED26O95402 600 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms