RNA–Protein interactions for RNA: ENST00000514404.1

AC008560.1-202, humanhuman

APPRIS ALT2 TSL 4

Gene AC008560.1, Length 332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008560.1-202ENST00000514404 PCSK2P16519 638 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 PREPP48147 710 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 ORC1Q13415 861 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 SF3B2Q13435 895 aaKnown RBP3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 SPRED3Q2MJR0 410 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 ALKBH2Q6NS38 261 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 TRIM42Q8IWZ5 723 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 CACTIN-AS1Q8N1I8 211 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 RETREG2Q8NC44 543 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 ASAP3Q8TDY4 903 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 TUT1Q9H6E5 874 aaKnown RBP3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 PCMTD2Q9NV79 361 aa3.54□□□□□ -1.84
AC008560.1-202ENST00000514404 A0A1W2PP55 124 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 ECEL1O95672 775 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 TGFB1P01137 390 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 RPLP1P05386 114 aaKnown RBP3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 ESRRAP11474 423 aaPredicted RBP3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 DRD2P14416 443 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 SSTR4P31391 388 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 GRIA4P48058 902 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 PIP4K2BP78356 416 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 ZNF423Q2M1K9 1284 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 TXNDC2Q86VQ3 553 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 TTC16Q8NEE8 873 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 SNX29Q8TEQ0 813 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 BSNDQ8WZ55 320 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 UTP4Q969X6 686 aaKnown RBP3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 TCF12Q99081 682 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 BHLHE41Q9C0J9 482 aaPredicted RBP3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 C7orf69Q9H7B7 122 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 STOML1Q9UBI4 398 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 RNF112Q9ULX5 631 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 RAXQ9Y2V3 346 aa3.53□□□□□ -1.84
AC008560.1-202ENST00000514404 LOC100289279A0A1B0GTE1 492 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 IGLV1-40P01703 118 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 C19orf57Q0VDD7 668 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 IKBKEQ14164 716 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 SGO2Q562F6 1265 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 FAM117BQ6P1L5 589 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 PMEPA1Q969W9 287 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 MYRFLQ96LU7 910 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 NRSN2Q9GZP1 204 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 OSGEPQ9NPF4 335 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 USTQ9Y2C2 406 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 AMOTL2Q9Y2J4 779 aa3.52□□□□□ -1.85
AC008560.1-202ENST00000514404 A0A096LPE4 126 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 A0A1W2PPZ6 126 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 PRR19A6NJB7 356 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 GPR182O15218 404 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 BMP3P12645 472 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 EDN3P14138 238 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 USP5P45974 858 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 CD97P48960 835 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 IRAK1P51617 712 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 CABP4P57796 275 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 EHHADHQ08426 723 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 NFIAQ12857 509 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 ZDHHC13Q8IUH4 622 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 CCNJLQ8IV13 435 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 GLYCTKQ8IVS8 523 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 GALNT12Q8IXK2 581 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 FAM20CQ8IXL6 584 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 WNT8BQ93098 351 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 FAM129BQ96TA1 746 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 RUSC1Q9BVN2 902 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 TMPRSS13Q9BYE2 586 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 NPHS2Q9NP85 383 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 EGFL7Q9UHF1 273 aa3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 COL17A1Q9UMD9 1497 aaPredicted RBP3.51□□□□□ -1.85
AC008560.1-202ENST00000514404 DHX15O43143 795 aaKnown RBP3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 TIAF1O95411 115 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 HOXA10P31260 410 aaPredicted RBP3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 GSTM4Q03013 218 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 CDPF1Q6NVV7 123 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 BEND4Q6ZU67 534 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 FAM83CQ9BQN1 747 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 USP26Q9BXU7 913 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 CEP41Q9BYV8 373 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 NIF3L1Q9GZT8 377 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 RNF208Q9H0X6 261 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 KCNF1Q9H3M0 494 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 LIN7BQ9HAP6 207 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 BRPF3Q9ULD4 1205 aa3.5□□□□□ -1.85
AC008560.1-202ENST00000514404 MEGF11A6BM72 1044 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 PCDH1Q08174 1060 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 FZD5Q13467 585 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 RNF43Q68DV7 783 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 PI16Q6UXB8 463 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 C12orf50Q8NA57 414 aaPredicted RBP3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 SHKBP1Q8TBC3 707 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 EPS8L3Q8TE67 593 aaKnown RBP3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 DCAF11Q8TEB1 546 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 MFSD14AQ96MC6 490 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 TRIM56Q9BRZ2 755 aaKnown RBP3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 MTMR7Q9Y216 660 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 RNF114Q9Y508 228 aa3.49□□□□□ -1.85
AC008560.1-202ENST00000514404 FAM177BA6PVY3 158 aa3.48□□□□□ -1.85
AC008560.1-202ENST00000514404 EIF1AYO14602 144 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms