RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 KAZALD1Q96I82 304 aa15.46■□□□□ 0.07
SNHG4-208ENST00000514110 SUCLG2Q96I99 432 aa15.46■□□□□ 0.07
SNHG4-208ENST00000514110 JAG2Q9Y219 1238 aa15.46■□□□□ 0.07
SNHG4-208ENST00000514110 NBPF7P0C2Y1 421 aaPredicted RBP15.45■□□□□ 0.06
SNHG4-208ENST00000514110 NF2P35240 595 aa15.45■□□□□ 0.06
SNHG4-208ENST00000514110 PTPN12Q05209 780 aaKnown RBP15.45■□□□□ 0.06
SNHG4-208ENST00000514110 PRKG1Q13976 671 aa15.45■□□□□ 0.06
SNHG4-208ENST00000514110 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
SNHG4-208ENST00000514110 REM2Q8IYK8 340 aaPredicted RBP15.45■□□□□ 0.06
SNHG4-208ENST00000514110 MTMR14Q8NCE2 650 aa15.45■□□□□ 0.06
SNHG4-208ENST00000514110 MKRN3Q13064 507 aaKnown RBP15.44■□□□□ 0.06
SNHG4-208ENST00000514110 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
SNHG4-208ENST00000514110 PUS3Q9BZE2 481 aaKnown RBP15.44■□□□□ 0.06
SNHG4-208ENST00000514110 FZD1Q9UP38 647 aa15.44■□□□□ 0.06
SNHG4-208ENST00000514110 UTYO14607 1347 aa15.43■□□□□ 0.06
SNHG4-208ENST00000514110 AOX1Q06278 1338 aa15.43■□□□□ 0.06
SNHG4-208ENST00000514110 RGS19P49795 217 aa15.43■□□□□ 0.06
SNHG4-208ENST00000514110 FKBP1AP62942 108 aaKnown RBP15.43■□□□□ 0.06
SNHG4-208ENST00000514110 CFAP100Q494V2 611 aa15.43■□□□□ 0.06
SNHG4-208ENST00000514110 ARMC9Q7Z3E5 817 aa15.43■□□□□ 0.06
SNHG4-208ENST00000514110 DEFB129Q9H1M3 183 aa15.43■□□□□ 0.06
SNHG4-208ENST00000514110 ECM29Q5VYK3 1845 aa15.43■□□□□ 0.06
SNHG4-208ENST00000514110 COL1A1P02452 1464 aaPredicted RBP15.42■□□□□ 0.06
SNHG4-208ENST00000514110 CLRN2A0PK11 232 aa15.42■□□□□ 0.06
SNHG4-208ENST00000514110 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
SNHG4-208ENST00000514110 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
SNHG4-208ENST00000514110 GYG1P46976 350 aa15.42■□□□□ 0.06
SNHG4-208ENST00000514110 UBE4AQ14139 1066 aa15.42■□□□□ 0.06
SNHG4-208ENST00000514110 LDLRAD1Q5T700 205 aa15.42■□□□□ 0.06
SNHG4-208ENST00000514110 PRMT6Q96LA8 375 aaPredicted RBP15.42■□□□□ 0.06
SNHG4-208ENST00000514110 BICC1Q9H694 974 aaKnown RBP15.42■□□□□ 0.06
SNHG4-208ENST00000514110 ANGEL1Q9UNK9 670 aaKnown RBP15.42■□□□□ 0.06
SNHG4-208ENST00000514110 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
SNHG4-208ENST00000514110 SSC5DA1L4H1 1573 aa15.41■□□□□ 0.06
SNHG4-208ENST00000514110 TM4SF4P48230 202 aa15.41■□□□□ 0.06
SNHG4-208ENST00000514110 TDRD7Q8NHU6 1098 aaKnown RBP15.41■□□□□ 0.06
SNHG4-208ENST00000514110 FAM84BQ96KN1 310 aaPredicted RBP15.41■□□□□ 0.06
SNHG4-208ENST00000514110 FAM205AQ6ZU69 1335 aa15.41■□□□□ 0.06
SNHG4-208ENST00000514110 TBC1D8O95759 1140 aa15.4■□□□□ 0.06
SNHG4-208ENST00000514110 HIBADHP31937 336 aaKnown RBP15.4■□□□□ 0.06
SNHG4-208ENST00000514110 MLLT1Q03111 559 aaPredicted RBP15.4■□□□□ 0.06
SNHG4-208ENST00000514110 RABL6Q3YEC7 729 aaPredicted RBP15.4■□□□□ 0.06
SNHG4-208ENST00000514110 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
SNHG4-208ENST00000514110 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
SNHG4-208ENST00000514110 VEZTQ9HBM0 779 aa15.4■□□□□ 0.06
SNHG4-208ENST00000514110 PTPRCP08575 1304 aa15.4■□□□□ 0.06
SNHG4-208ENST00000514110 E9PSI1 815 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 MYO1BO43795 1136 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 RBM5P52756 815 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNHG4-208ENST00000514110 MAP3K11Q16584 847 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 MFSD14BQ5SR56 506 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 SPRYD7Q5W111 196 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 CTU1Q7Z7A3 348 aaKnown RBP15.39■□□□□ 0.05
SNHG4-208ENST00000514110 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
SNHG4-208ENST00000514110 PPP2R3BQ9Y5P8 575 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 MROH5Q6ZUA9 1318 aa15.39■□□□□ 0.05
SNHG4-208ENST00000514110 SLFN5Q08AF3 891 aa15.38■□□□□ 0.05
SNHG4-208ENST00000514110 NBPF12Q5TAG4 269 aaPredicted RBP15.38■□□□□ 0.05
SNHG4-208ENST00000514110 ZNF296Q8WUU4 475 aaPredicted RBP15.38■□□□□ 0.05
SNHG4-208ENST00000514110 CLMNQ96JQ2 1002 aa15.38■□□□□ 0.05
SNHG4-208ENST00000514110 TTF2Q9UNY4 1162 aaKnown RBP15.38■□□□□ 0.05
SNHG4-208ENST00000514110 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 PPP1R12BO60237 982 aaPredicted RBP15.37■□□□□ 0.05
SNHG4-208ENST00000514110 SREBF2Q12772 1141 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 RASA3Q14644 834 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 KLHDC4Q8TBB5 520 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 SLC10A4Q96EP9 437 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 USP44Q9H0E7 712 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 R3HDMLQ9H3Y0 253 aa15.37■□□□□ 0.05
SNHG4-208ENST00000514110 IQSEC3Q9UPP2 1182 aaPredicted RBP15.37■□□□□ 0.05
SNHG4-208ENST00000514110 GPR25O00155 361 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 GRIK5Q16478 980 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 SUPT20HL1Q3ZLR7 823 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 METTL24Q5JXM2 366 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 CDCA7LQ96GN5 454 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 ZNF70Q9UC06 446 aaPredicted RBP15.36■□□□□ 0.05
SNHG4-208ENST00000514110 SERPINA10Q9UK55 444 aa15.36■□□□□ 0.05
SNHG4-208ENST00000514110 TNRC18O15417 2968 aaPredicted RBP15.35■□□□□ 0.05
SNHG4-208ENST00000514110 USP2O75604 605 aaPredicted RBP15.35■□□□□ 0.05
SNHG4-208ENST00000514110 SOX10P56693 466 aa15.35■□□□□ 0.05
SNHG4-208ENST00000514110 VPS37DQ86XT2 251 aa15.35■□□□□ 0.05
SNHG4-208ENST00000514110 DZIP1LQ8IYY4 767 aaKnown RBP15.35■□□□□ 0.05
SNHG4-208ENST00000514110 CFHR5Q9BXR6 569 aa15.35■□□□□ 0.05
SNHG4-208ENST00000514110 TDRD3Q9H7E2 651 aaKnown RBP15.35■□□□□ 0.05
SNHG4-208ENST00000514110 PDE8BO95263 885 aa15.34■□□□□ 0.05
SNHG4-208ENST00000514110 CRKP46108 304 aa15.34■□□□□ 0.05
SNHG4-208ENST00000514110 CHAF1AQ13111 956 aaPredicted RBP15.34■□□□□ 0.05
SNHG4-208ENST00000514110 NOM1Q5C9Z4 860 aaKnown RBP15.34■□□□□ 0.05
SNHG4-208ENST00000514110 CDAN1Q8IWY9 1227 aa15.34■□□□□ 0.05
SNHG4-208ENST00000514110 MANSC4A6NHS7 340 aaPredicted RBP15.33■□□□□ 0.04
SNHG4-208ENST00000514110 ZBTB48P10074 688 aaPredicted RBP15.33■□□□□ 0.04
SNHG4-208ENST00000514110 GJA5P36382 358 aa15.33■□□□□ 0.04
SNHG4-208ENST00000514110 IREB2P48200 963 aaKnown RBP15.33■□□□□ 0.04
SNHG4-208ENST00000514110 RFX5P48382 616 aaPredicted RBP15.33■□□□□ 0.04
SNHG4-208ENST00000514110 BCAMP50895 628 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms