RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CSRNP1Q96S65 589 aa7.24□□□□□ -1.25
HMGB3P13-201ENST00000511263 GPR182O15218 404 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 ATP11AP98196 1134 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 COL19A1Q14993 1142 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 COL13A1Q5TAT6 717 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 MCTP1Q6DN14 999 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 ALG1LQ6GMV1 187 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 DZIP1LQ8IYY4 767 aaKnown RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 DDX54Q8TDD1 881 aaKnown RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 WNT8BQ93098 351 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 PCMTD2Q9NV79 361 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 FSTP19883 344 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 SSTR4P31391 388 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 ADAM19Q9H013 955 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 AKTIPQ9H8T0 292 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 GOLGA2P5Q9HBQ8 144 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 TRIM33Q9UPN9 1127 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 GADD45BO75293 160 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 MAPK8P45983 427 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 HNRNPUQ00839 825 aaKnown RBP eCLIP7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 ORC1Q13415 861 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 KIAA0319Q5VV43 1072 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 CCDC74AQ96AQ1 378 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 ZKSCAN3Q9BRR0 538 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 BHLHE41Q9C0J9 482 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 EHD4Q9H223 541 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 H3BRJ5 948 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 GIPC1O14908 333 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 PIP4K2BP78356 416 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 AGGF1Q8N302 714 aaeCLIP7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 ASAP3Q8TDY4 903 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 NXPE3Q969Y0 559 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 FRMD6Q96NE9 622 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 POP1Q99575 1024 aaKnown RBP7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 SRCIN1Q9C0H9 1055 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 LIN7BQ9HAP6 207 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 OSGEPQ9NPF4 335 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 PNMA6FA0A0J9YX94 578 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 MED26O95402 600 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 XRCC5P13010 732 aaKnown RBP7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 DSC3Q14574 896 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 ENOX2Q16206 610 aaKnown RBP7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 SPG7Q9UQ90 795 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 A0A1W2PP55 124 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 IGHA2P01877 340 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 POLR3DP05423 398 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 CD97P48960 835 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 PTPN12Q05209 780 aaKnown RBP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 FMR1Q06787 632 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 IKBKEQ14164 716 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 SETDB1Q15047 1291 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 HP1BP3Q5SSJ5 553 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 TMCO4Q5TGY1 634 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 CCNJLQ8IV13 435 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 TMEM130Q8N3G9 435 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 NPHS2Q9NP85 383 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 SEC31BQ9NQW1 1179 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 CCDC180Q9P1Z9 1646 aa7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 NFKBIEO00221 500 aa7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 EAPPQ56P03 285 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 PEAR1Q5VY43 1037 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 Q6ZS46 218 aa7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 A0A096LPE4 126 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 A0A1W2PPZ6 126 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 ANKRD33BA6NCL7 494 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 LINC01387J3KSC0 135 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 FSCN2O14926 492 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 UBL7Q96S82 380 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 CLEC4MQ9H2X3 399 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 SOX17Q9H6I2 414 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 SOX13Q9UN79 622 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 COL17A1Q9UMD9 1497 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 GLB1P16278 677 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 CD68P34810 354 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 C19orf57Q0VDD7 668 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 RPS26P11Q5JNZ5 115 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 USPL1Q5W0Q7 1092 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 PRPF40BQ6NWY9 871 aaKnown RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 GALNT11Q8NCW6 608 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 WISP1O95388 367 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 TGFB1P01137 390 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 LDHBP07195 334 aaKnown RBP7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 EPHA1P21709 976 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 DTHD1Q6ZMT9 781 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 LATS2Q9NRM7 1088 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 PRPF40AO75400 957 aaKnown RBP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 ACPPP15309 386 aa7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 CDC25BP30305 580 aa7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 TRIM26Q12899 539 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 TXNDC11Q6PKC3 985 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms