RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 PUM3Q15397 648 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-213ENST00000510187 MASTLQ96GX5 879 aa19.09■□□□□ 0.65
SQSTM1-213ENST00000510187 ZSWIM6Q9HCJ5 1215 aa19.09■□□□□ 0.65
SQSTM1-213ENST00000510187 ATP6V1DQ9Y5K8 247 aa19.09■□□□□ 0.65
SQSTM1-213ENST00000510187 CCDC171Q6TFL3 1326 aa19.09■□□□□ 0.65
SQSTM1-213ENST00000510187 BBOX1O75936 387 aa19.08■□□□□ 0.65
SQSTM1-213ENST00000510187 PDIA4P13667 645 aaKnown RBP19.08■□□□□ 0.65
SQSTM1-213ENST00000510187 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.65
SQSTM1-213ENST00000510187 C10orf71Q711Q0 1435 aa19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 CASTP20810 708 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 ALDH1B1P30837 517 aa19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 LPIN2Q92539 896 aa19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 ZNF622Q969S3 477 aaKnown RBP eCLIP19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 NAP1L5Q96NT1 182 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 TSPY26PQ9H489 355 aa19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 SMC3Q9UQE7 1217 aa19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 CYP46A1Q9Y6A2 500 aa19.08■□□□□ 0.64
SQSTM1-213ENST00000510187 STX6O43752 255 aa19.07■□□□□ 0.64
SQSTM1-213ENST00000510187 NECTIN1Q15223 517 aa19.07■□□□□ 0.64
SQSTM1-213ENST00000510187 XAGE2Q96GT9 111 aa19.07■□□□□ 0.64
SQSTM1-213ENST00000510187 ANKRD2Q9GZV1 360 aa19.07■□□□□ 0.64
SQSTM1-213ENST00000510187 PDRG1Q9NUG6 133 aa19.07■□□□□ 0.64
SQSTM1-213ENST00000510187 SNAP23O00161 211 aa19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 ZKSCAN1P17029 563 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 FGFR2P21802 821 aa19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 CHRNA5P30532 468 aa19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 ADORA1P30542 326 aa19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 PTH1RQ03431 593 aa19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 GORABQ5T7V8 394 aa19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 USP48Q86UV5 1035 aa19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 COL11A2P13942 1736 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-213ENST00000510187 PPEF1O14829 653 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 LETM1O95202 739 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 SLC5A1P13866 664 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 MSNP26038 577 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 CSPP1Q1MSJ5 1256 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 STYK1Q6J9G0 422 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 JAKMIP1Q96N16 626 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 IFIT1P09914 478 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 SYT1P21579 422 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 MCM5P33992 734 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 PRPF40BQ6NWY9 871 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 TMC4Q7Z404 712 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 FAM184AQ8NB25 1140 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 MAP4K1Q92918 833 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 NOL7Q9UMY1 257 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 RFX7Q2KHR2 1363 aa19.05■□□□□ 0.64
SQSTM1-213ENST00000510187 F13A1P00488 732 aa19.04■□□□□ 0.64
SQSTM1-213ENST00000510187 PSMA5P28066 241 aa19.04■□□□□ 0.64
SQSTM1-213ENST00000510187 KCNJ4P48050 445 aa19.04■□□□□ 0.64
SQSTM1-213ENST00000510187 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
SQSTM1-213ENST00000510187 SLC51AQ86UW1 340 aa19.04■□□□□ 0.64
SQSTM1-213ENST00000510187 SGIP1Q9BQI5 828 aa19.04■□□□□ 0.64
SQSTM1-213ENST00000510187 ANKIB1Q9P2G1 1089 aa19.04■□□□□ 0.64
SQSTM1-213ENST00000510187 MED23Q9ULK4 1368 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 ATP5JP18859 108 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 UBE2HP62256 183 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 UBE4AQ14139 1066 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 CCDC183Q5T5S1 534 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 ALDH8A1Q9H2A2 487 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 RBM8AQ9Y5S9 174 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 PTGER2P43116 358 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 RNF20Q5VTR2 975 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 CREB3L3Q68CJ9 461 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 CNKSR1Q969H4 720 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 ATP6V0A2Q9Y487 856 aa19.03■□□□□ 0.64
SQSTM1-213ENST00000510187 XDHP47989 1333 aa19.02■□□□□ 0.64
SQSTM1-213ENST00000510187 WTIPA6NIX2 430 aaPredicted RBP19.02■□□□□ 0.63
SQSTM1-213ENST00000510187 NMIQ13287 307 aaPredicted RBP19.02■□□□□ 0.63
SQSTM1-213ENST00000510187 UVSSAQ2YD98 709 aa19.02■□□□□ 0.63
SQSTM1-213ENST00000510187 TTC39AQ5SRH9 613 aa19.02■□□□□ 0.63
SQSTM1-213ENST00000510187 SP8Q8IXZ3 490 aa19.02■□□□□ 0.63
SQSTM1-213ENST00000510187 CCDC39Q9UFE4 941 aa19.02■□□□□ 0.63
SQSTM1-213ENST00000510187 ZNF500O60304 480 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-213ENST00000510187 GADD45BO75293 160 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-213ENST00000510187 GPSM2P81274 684 aa19.01■□□□□ 0.63
SQSTM1-213ENST00000510187 ANKRD1Q15327 319 aa19.01■□□□□ 0.63
SQSTM1-213ENST00000510187 HMG20BQ9P0W2 317 aa19.01■□□□□ 0.63
SQSTM1-213ENST00000510187 PPP1R1BQ9UD71 204 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-213ENST00000510187 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 ADCK5Q3MIX3 580 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 TMX4Q9H1E5 349 aaPredicted RBP19■□□□□ 0.63
SQSTM1-213ENST00000510187 A0A1B0GUL6 1792 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 A0A0G2JLW4 131 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 SLC27A2O14975 620 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 OFD1O75665 1012 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 LARGE1O95461 756 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 DPEP1P16444 411 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 GJB2P29033 226 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 TSGA10IPQ3SY00 556 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 CCDC102BQ68D86 513 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 PDZRN4Q6ZMN7 1036 aaPredicted RBP19■□□□□ 0.63
SQSTM1-213ENST00000510187 CCDC83Q8IWF9 413 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 FSD1Q9BTV5 496 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 SPON1Q9HCB6 807 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 MTMR6Q9Y217 621 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 LEMD3Q9Y2U8 911 aa19■□□□□ 0.63
SQSTM1-213ENST00000510187 TPM2P07951 284 aa18.99■□□□□ 0.63
SQSTM1-213ENST00000510187 PHKA1P46020 1223 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms