RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 H2AFB2P0C5Z0 115 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 GLB1P16278 677 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 SPRED3Q2MJR0 410 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 Q6ZS46 218 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 CITED4Q96RK1 184 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 UBL7Q96S82 380 aaPredicted RBP8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 TCF12Q99081 682 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 RBCK1Q9BYM8 510 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 NPHS2Q9NP85 383 aa8.9□□□□□ -0.98
UBE2D3-225ENST00000508476 EIF1AYO14602 144 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 CPNE3O75131 537 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 GRIA4P48058 902 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 IKBKEQ14164 716 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 DUOXA2Q1HG44 320 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 PRSS36Q5K4E3 855 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 TMC7Q7Z402 723 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 CCNJLQ8IV13 435 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 WNT8BQ93098 351 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 LIN7BQ9HAP6 207 aa8.89□□□□□ -0.99
UBE2D3-225ENST00000508476 C19orf57Q0VDD7 668 aa8.88□□□□□ -0.99
UBE2D3-225ENST00000508476 OSGEPQ9NPF4 335 aa8.88□□□□□ -0.99
UBE2D3-225ENST00000508476 ESRRAP11474 423 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-225ENST00000508476 CCDC74AQ96AQ1 378 aa8.87□□□□□ -0.99
UBE2D3-225ENST00000508476 DCTN4Q9UJW0 460 aa8.87□□□□□ -0.99
UBE2D3-225ENST00000508476 A0A096LPE4 126 aa8.86□□□□□ -0.99
UBE2D3-225ENST00000508476 A0A1W2PPZ6 126 aa8.86□□□□□ -0.99
UBE2D3-225ENST00000508476 NEFLP07196 543 aa8.86□□□□□ -0.99
UBE2D3-225ENST00000508476 KIAA0319Q5VV43 1072 aa8.86□□□□□ -0.99
UBE2D3-225ENST00000508476 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
UBE2D3-225ENST00000508476 CSRNP1Q96S65 589 aa8.86□□□□□ -0.99
UBE2D3-225ENST00000508476 MAPK1P28482 360 aa8.85□□□□□ -0.99
UBE2D3-225ENST00000508476 PRR23CQ6ZRP0 262 aa8.85□□□□□ -0.99
UBE2D3-225ENST00000508476 ALKBH8Q96BT7 664 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-225ENST00000508476 TRAIPQ9BWF2 469 aa8.85□□□□□ -0.99
UBE2D3-225ENST00000508476 EHD4Q9H223 541 aa8.85□□□□□ -0.99
UBE2D3-225ENST00000508476 DLGAP3O95886 979 aa8.84□□□□□ -0.99
UBE2D3-225ENST00000508476 ARL4DP49703 201 aa8.84□□□□□ -0.99
UBE2D3-225ENST00000508476 ZNF423Q2M1K9 1284 aa8.84□□□□□ -0.99
UBE2D3-225ENST00000508476 PI16Q6UXB8 463 aa8.84□□□□□ -0.99
UBE2D3-225ENST00000508476 ARMC10Q8N2F6 343 aa8.84□□□□□ -0.99
UBE2D3-225ENST00000508476 EPS8L3Q8TE67 593 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-225ENST00000508476 DNAJC25Q9H1X3 360 aa8.84□□□□□ -0.99
UBE2D3-225ENST00000508476 PCDH1Q08174 1060 aa8.83□□□□□ -1
UBE2D3-225ENST00000508476 KCNA1Q09470 495 aa8.83□□□□□ -1
UBE2D3-225ENST00000508476 USP26Q9BXU7 913 aa8.83□□□□□ -1
UBE2D3-225ENST00000508476 GSTM4Q03013 218 aa8.82□□□□□ -1
UBE2D3-225ENST00000508476 ZMYM1Q5SVZ6 1142 aa8.82□□□□□ -1
UBE2D3-225ENST00000508476 RUSC1Q9BVN2 902 aa8.82□□□□□ -1
UBE2D3-225ENST00000508476 CLEC4MQ9H2X3 399 aaPredicted RBP8.82□□□□□ -1
UBE2D3-225ENST00000508476 ABCB6Q9NP58 842 aa8.82□□□□□ -1
UBE2D3-225ENST00000508476 LOC100289279A0A1B0GTE1 492 aa8.81□□□□□ -1
UBE2D3-225ENST00000508476 GADD45BO75293 160 aaPredicted RBP8.81□□□□□ -1
UBE2D3-225ENST00000508476 PREPP48147 710 aa8.81□□□□□ -1
UBE2D3-225ENST00000508476 DSC3Q14574 896 aa8.81□□□□□ -1
UBE2D3-225ENST00000508476 FAM46AQ96IP4 442 aaKnown RBP8.81□□□□□ -1
UBE2D3-225ENST00000508476 CEP41Q9BYV8 373 aa8.81□□□□□ -1
UBE2D3-225ENST00000508476 SOX17Q9H6I2 414 aaPredicted RBP8.81□□□□□ -1
UBE2D3-225ENST00000508476 TREHO43280 583 aa8.8□□□□□ -1
UBE2D3-225ENST00000508476 GRM2Q14416 872 aa8.8□□□□□ -1
UBE2D3-225ENST00000508476 GLIS3Q8NEA6 775 aa8.8□□□□□ -1
UBE2D3-225ENST00000508476 NRSN2Q9GZP1 204 aa8.8□□□□□ -1
UBE2D3-225ENST00000508476 RNF208Q9H0X6 261 aa8.8□□□□□ -1
UBE2D3-225ENST00000508476 ZNF576Q9H609 170 aa8.8□□□□□ -1
UBE2D3-225ENST00000508476 PNMA6FA0A0J9YX94 578 aa8.79□□□□□ -1
UBE2D3-225ENST00000508476 CTSBP07858 339 aa8.79□□□□□ -1
UBE2D3-225ENST00000508476 Q8N3U1 123 aa8.79□□□□□ -1
UBE2D3-225ENST00000508476 UTP4Q969X6 686 aaKnown RBP8.79□□□□□ -1
UBE2D3-225ENST00000508476 ECEL1O95672 775 aa8.78□□□□□ -1
UBE2D3-225ENST00000508476 ITPKAP23677 461 aa8.78□□□□□ -1
UBE2D3-225ENST00000508476 PLCB3Q01970 1234 aa8.78□□□□□ -1
UBE2D3-225ENST00000508476 SETDB2Q96T68 719 aa8.78□□□□□ -1
UBE2D3-225ENST00000508476 RAXQ9Y2V3 346 aa8.78□□□□□ -1
UBE2D3-225ENST00000508476 TMEM238LA0A1B0GVL6 79 aa8.77□□□□□ -1.01
UBE2D3-225ENST00000508476 FSTP19883 344 aa8.77□□□□□ -1.01
UBE2D3-225ENST00000508476 ANKRD34AQ69YU3 496 aa8.77□□□□□ -1.01
UBE2D3-225ENST00000508476 PRPF40BQ6NWY9 871 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-225ENST00000508476 TRIM56Q9BRZ2 755 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-225ENST00000508476 TMPRSS13Q9BYE2 586 aa8.77□□□□□ -1.01
UBE2D3-225ENST00000508476 MEGF11A6BM72 1044 aa8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 DHX15O43143 795 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 SART1O43290 800 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 B3GALT4O96024 378 aa8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 MAOBP27338 520 aa8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 ZNF157P51786 506 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 FAAP100Q0VG06 881 aa8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 ENOX2Q16206 610 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 FDX2Q6P4F2 183 aa8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 MYRFLQ96LU7 910 aa8.76□□□□□ -1.01
UBE2D3-225ENST00000508476 HMX2A2RU54 273 aa8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 BMP3P12645 472 aa8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 DRD2P14416 443 aa8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 UVSSAQ2YD98 709 aa8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 STOML1Q9UBI4 398 aa8.75□□□□□ -1.01
UBE2D3-225ENST00000508476 TIAF1O95411 115 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 MAPK8P45983 427 aa8.74□□□□□ -1.01
UBE2D3-225ENST00000508476 FCGRTP55899 365 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms