RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TAF5LO75529 589 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 CSF1RP07333 972 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 FKBP1BP68106 108 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 GTF2IP78347 998 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 FOXO4P98177 505 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
GYPB-205ENST00000505583 CHRNDQ07001 517 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 NEXNQ0ZGT2 675 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 FLIIQ13045 1269 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 CCDC27Q2M243 656 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 TTLL5Q6EMB2 1281 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 CTU1Q7Z7A3 348 aaKnown RBP7.5□□□□□ -1.21
GYPB-205ENST00000505583 HELBQ8NG08 1087 aaPredicted RBP7.5□□□□□ -1.21
GYPB-205ENST00000505583 PLA2G12BQ9BX93 195 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 COA1Q9GZY4 146 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 LEMD3Q9Y2U8 911 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 LAMB1P07942 1786 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 FANCIQ9NVI1 1328 aa7.5□□□□□ -1.21
GYPB-205ENST00000505583 F6X3S4 739 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 VAMP4O75379 141 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 IGHMBP2P38935 993 aaKnown RBP7.49□□□□□ -1.21
GYPB-205ENST00000505583 MNX1P50219 401 aaPredicted RBP7.49□□□□□ -1.21
GYPB-205ENST00000505583 FKBP5Q13451 457 aaPredicted RBP7.49□□□□□ -1.21
GYPB-205ENST00000505583 TTLL12Q14166 644 aaPredicted RBP7.49□□□□□ -1.21
GYPB-205ENST00000505583 EPHA10Q5JZY3 1008 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 LINS1Q8NG48 757 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 ZNF296Q8WUU4 475 aaPredicted RBP7.49□□□□□ -1.21
GYPB-205ENST00000505583 DNAAF4Q8WXU2 420 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 CD209Q9NNX6 404 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 HPS5Q9UPZ3 1129 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 JAG2Q9Y219 1238 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 SALL2Q9Y467 1007 aaPredicted RBP7.49□□□□□ -1.21
GYPB-205ENST00000505583 MYO3BQ8WXR4 1341 aa7.49□□□□□ -1.21
GYPB-205ENST00000505583 OTOFQ9HC10 1997 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
GYPB-205ENST00000505583 TM4SF4P48230 202 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
GYPB-205ENST00000505583 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
GYPB-205ENST00000505583 CLMNQ96JQ2 1002 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 PRMT6Q96LA8 375 aaPredicted RBP7.48□□□□□ -1.21
GYPB-205ENST00000505583 MPHOSPH8Q99549 860 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 ANKRD2Q9GZV1 360 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 IL16Q14005 1332 aa7.48□□□□□ -1.21
GYPB-205ENST00000505583 CLRN2A0PK11 232 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 ANKRD18BA2A2Z9 1011 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 GPR25O00155 361 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 BEND3Q5T5X7 828 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 SPRYD7Q5W111 196 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 CHMP4AQ9BY43 222 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 DEFB129Q9H1M3 183 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 MYH16Q9H6N6 1097 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 ANGEL1Q9UNK9 670 aaKnown RBP7.47□□□□□ -1.21
GYPB-205ENST00000505583 ARAP2Q8WZ64 1704 aa7.47□□□□□ -1.21
GYPB-205ENST00000505583 IL1R1P14778 569 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 KCNJ4P48050 445 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 CAP1Q01518 475 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 GSE1Q14687 1217 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 DLGAP5Q15398 846 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 NBPF12Q5TAG4 269 aaPredicted RBP7.46□□□□□ -1.22
GYPB-205ENST00000505583 LMBR1LQ6UX01 489 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 C15orf52Q6ZUT6 534 aaKnown RBP7.46□□□□□ -1.22
GYPB-205ENST00000505583 APOBEC3FQ8IUX4 373 aaKnown RBP7.46□□□□□ -1.22
GYPB-205ENST00000505583 CDAN1Q8IWY9 1227 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 KAZALD1Q96I82 304 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 HDAC9Q9UKV0 1011 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 CHMP3Q9Y3E7 222 aa7.46□□□□□ -1.22
GYPB-205ENST00000505583 COL1A1P02452 1464 aaPredicted RBP7.45□□□□□ -1.22
GYPB-205ENST00000505583 IGF2BP3O00425 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
GYPB-205ENST00000505583 PLIN1O60240 522 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 NF2P35240 595 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 GJA5P36382 358 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 IFIT5Q13325 482 aaKnown RBP7.45□□□□□ -1.22
GYPB-205ENST00000505583 GRIK5Q16478 980 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 CFAP100Q494V2 611 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
GYPB-205ENST00000505583 ARMC9Q7Z3E5 817 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 MTMR14Q8NCE2 650 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 WNK4Q96J92 1243 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 CFHR5Q9BXR6 569 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 PUS3Q9BZE2 481 aaKnown RBP7.45□□□□□ -1.22
GYPB-205ENST00000505583 MRS2Q9HD23 443 aa7.45□□□□□ -1.22
GYPB-205ENST00000505583 PDE4DIPQ5VU43 2346 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 ZSWIM8A7E2V4 1837 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 GRM8O00222 908 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 FKTNO75072 461 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 USP2O75604 605 aaPredicted RBP7.44□□□□□ -1.22
GYPB-205ENST00000505583 GYG1P46976 350 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 MMP14P50281 582 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 SREBF2Q12772 1141 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 RASA3Q14644 834 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 PKN2Q16513 984 aaKnown RBP7.44□□□□□ -1.22
GYPB-205ENST00000505583 MAP3K11Q16584 847 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 FBXO46Q6PJ61 603 aaPredicted RBP7.44□□□□□ -1.22
GYPB-205ENST00000505583 LDHAL6AQ6ZMR3 332 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 IFNL1Q8IU54 200 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 WDR63Q8IWG1 891 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 796.2 ms