RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SCAF8Q9UPN6 1271 aaKnown RBP25.15■■□□□ 1.62
UBE2D3-220ENST00000505307 MROH5Q6ZUA9 1318 aa25.14■■□□□ 1.62
UBE2D3-220ENST00000505307 RABL6Q3YEC7 729 aaPredicted RBP25.14■■□□□ 1.62
UBE2D3-220ENST00000505307 PRAMEF18Q5VWM3 479 aa25.14■■□□□ 1.62
UBE2D3-220ENST00000505307 SSH1Q8WYL5 1049 aa25.14■■□□□ 1.62
UBE2D3-220ENST00000505307 RNF186Q9NXI6 227 aa25.14■■□□□ 1.62
UBE2D3-220ENST00000505307 COL1A1P02452 1464 aaPredicted RBP25.14■■□□□ 1.61
UBE2D3-220ENST00000505307 A0A1B0GUL6 1792 aa25.13■■□□□ 1.61
UBE2D3-220ENST00000505307 UBE2Q2LH0YL09 131 aa25.13■■□□□ 1.61
UBE2D3-220ENST00000505307 MYO1BO43795 1136 aa25.13■■□□□ 1.61
UBE2D3-220ENST00000505307 ALDH1L2Q3SY69 923 aa25.13■■□□□ 1.61
UBE2D3-220ENST00000505307 ARMC9Q7Z3E5 817 aa25.13■■□□□ 1.61
UBE2D3-220ENST00000505307 RIPOR2Q9Y4F9 1068 aa25.13■■□□□ 1.61
UBE2D3-220ENST00000505307 FAM205AQ6ZU69 1335 aa25.12■■□□□ 1.61
UBE2D3-220ENST00000505307 TRPA1O75762 1119 aa25.12■■□□□ 1.61
UBE2D3-220ENST00000505307 HIBADHP31937 336 aaKnown RBP25.12■■□□□ 1.61
UBE2D3-220ENST00000505307 BICC1Q9H694 974 aaKnown RBP25.12■■□□□ 1.61
UBE2D3-220ENST00000505307 PPP2R3BQ9Y5P8 575 aa25.12■■□□□ 1.61
UBE2D3-220ENST00000505307 CASP8AP2Q9UKL3 1982 aa25.11■■□□□ 1.61
UBE2D3-220ENST00000505307 MOB2Q70IA6 237 aa25.11■■□□□ 1.61
UBE2D3-220ENST00000505307 TDRD7Q8NHU6 1098 aaKnown RBP25.11■■□□□ 1.61
UBE2D3-220ENST00000505307 CFAP100Q494V2 611 aa25.1■■□□□ 1.61
UBE2D3-220ENST00000505307 PUS3Q9BZE2 481 aaKnown RBP25.1■■□□□ 1.61
UBE2D3-220ENST00000505307 MCOLN1Q9GZU1 580 aa25.1■■□□□ 1.61
UBE2D3-220ENST00000505307 DEFB129Q9H1M3 183 aa25.1■■□□□ 1.61
UBE2D3-220ENST00000505307 SPDYE2BA6NHP3 402 aa25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 CCDC85CA6NKD9 419 aa25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 F8W031 263 aaPredicted RBP25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 SPDYE6P0CI01 402 aa25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 DGKZQ13574 1117 aa25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 FAM84BQ96KN1 310 aaPredicted RBP25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 AKAP11Q9UKA4 1901 aa25.09■■□□□ 1.61
UBE2D3-220ENST00000505307 ANKRD44Q8N8A2 993 aa25.08■■□□□ 1.61
UBE2D3-220ENST00000505307 USP44Q9H0E7 712 aa25.08■■□□□ 1.61
UBE2D3-220ENST00000505307 GYG1P46976 350 aa25.07■■□□□ 1.6
UBE2D3-220ENST00000505307 MFSD14BQ5SR56 506 aa25.07■■□□□ 1.6
UBE2D3-220ENST00000505307 LDLRAD1Q5T700 205 aa25.07■■□□□ 1.6
UBE2D3-220ENST00000505307 TRMT2AQ8IZ69 625 aaKnown RBP25.07■■□□□ 1.6
UBE2D3-220ENST00000505307 UNCXA6NJT0 531 aa25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 PPP1R12BO60237 982 aaPredicted RBP25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 RBM5P52756 815 aaKnown RBP eCLIP25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 PTPN12Q05209 780 aaKnown RBP25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 SUPT20HL1Q3ZLR7 823 aa25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 METTL24Q5JXM2 366 aa25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 VPS37DQ86XT2 251 aa25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 PRMT6Q96LA8 375 aaPredicted RBP25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 SMC4Q9NTJ3 1288 aa25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 SERPINA10Q9UK55 444 aa25.06■■□□□ 1.6
UBE2D3-220ENST00000505307 TM4SF4P48230 202 aa25.05■■□□□ 1.6
UBE2D3-220ENST00000505307 MAP3K11Q16584 847 aa25.05■■□□□ 1.6
UBE2D3-220ENST00000505307 CAVIN4Q5BKX8 364 aa25.05■■□□□ 1.6
UBE2D3-220ENST00000505307 FBXO33Q7Z6M2 555 aa25.05■■□□□ 1.6
UBE2D3-220ENST00000505307 ANGEL1Q9UNK9 670 aaKnown RBP25.05■■□□□ 1.6
UBE2D3-220ENST00000505307 JAG2Q9Y219 1238 aa25.05■■□□□ 1.6
UBE2D3-220ENST00000505307 CCER2I3L3R5 266 aa25.04■■□□□ 1.6
UBE2D3-220ENST00000505307 PDE8BO95263 885 aa25.04■■□□□ 1.6
UBE2D3-220ENST00000505307 SREBF2Q12772 1141 aa25.04■■□□□ 1.6
UBE2D3-220ENST00000505307 CDCA7LQ96GN5 454 aa25.04■■□□□ 1.6
UBE2D3-220ENST00000505307 TTF2Q9UNY4 1162 aaKnown RBP25.04■■□□□ 1.6
UBE2D3-220ENST00000505307 TNFAIP1Q13829 316 aa25.03■■□□□ 1.6
UBE2D3-220ENST00000505307 PRKG1Q13976 671 aa25.03■■□□□ 1.6
UBE2D3-220ENST00000505307 LRRC24Q50LG9 513 aa25.03■■□□□ 1.6
UBE2D3-220ENST00000505307 TBC1D22AQ8WUA7 517 aa25.03■■□□□ 1.6
UBE2D3-220ENST00000505307 VEZTQ9HBM0 779 aa25.03■■□□□ 1.6
UBE2D3-220ENST00000505307 CLRN2A0PK11 232 aa25.02■■□□□ 1.6
UBE2D3-220ENST00000505307 VGLL2Q8N8G2 317 aa25.02■■□□□ 1.6
UBE2D3-220ENST00000505307 HDAC5Q9UQL6 1122 aa25.02■■□□□ 1.6
UBE2D3-220ENST00000505307 PCDHAC2Q9Y5I4 1007 aa25.02■■□□□ 1.6
UBE2D3-220ENST00000505307 KIF16BQ96L93 1317 aa25.02■■□□□ 1.6
UBE2D3-220ENST00000505307 ECM29Q5VYK3 1845 aa25.02■■□□□ 1.6
UBE2D3-220ENST00000505307 SLC10A4Q96EP9 437 aa25.01■■□□□ 1.59
UBE2D3-220ENST00000505307 FRAT2O75474 233 aaPredicted RBP25■■□□□ 1.59
UBE2D3-220ENST00000505307 RGS19P49795 217 aa25■■□□□ 1.59
UBE2D3-220ENST00000505307 INHBEP58166 350 aa25■■□□□ 1.59
UBE2D3-220ENST00000505307 HDLBPQ00341 1268 aaKnown RBP25■■□□□ 1.59
UBE2D3-220ENST00000505307 NOM1Q5C9Z4 860 aaKnown RBP25■■□□□ 1.59
UBE2D3-220ENST00000505307 SPRYD7Q5W111 196 aa25■■□□□ 1.59
UBE2D3-220ENST00000505307 IFIT1P09914 478 aaKnown RBP24.99■■□□□ 1.59
UBE2D3-220ENST00000505307 RASA3Q14644 834 aa24.99■■□□□ 1.59
UBE2D3-220ENST00000505307 PUM3Q15397 648 aaKnown RBP24.99■■□□□ 1.59
UBE2D3-220ENST00000505307 SPDYE2Q495Y8 402 aa24.99■■□□□ 1.59
UBE2D3-220ENST00000505307 CTU1Q7Z7A3 348 aaKnown RBP24.99■■□□□ 1.59
UBE2D3-220ENST00000505307 IREB2P48200 963 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-220ENST00000505307 DZIP1LQ8IYY4 767 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-220ENST00000505307 CFHR5Q9BXR6 569 aa24.98■■□□□ 1.59
UBE2D3-220ENST00000505307 API5Q9BZZ5 524 aaKnown RBP24.98■■□□□ 1.59
UBE2D3-220ENST00000505307 ZNF70Q9UC06 446 aaPredicted RBP24.98■■□□□ 1.59
UBE2D3-220ENST00000505307 FBXO3Q9UK99 471 aa24.98■■□□□ 1.59
UBE2D3-220ENST00000505307 MANSC4A6NHS7 340 aaPredicted RBP24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 EYA2O00167 538 aa24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 ALDH1A1P00352 501 aa24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 UBTFL1P0CB47 393 aaPredicted RBP24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 ZBTB48P10074 688 aaPredicted RBP24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 CRKP46108 304 aa24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 MKRN3Q13064 507 aaKnown RBP24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 NBPF12Q5TAG4 269 aaPredicted RBP24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 KLHDC4Q8TBB5 520 aa24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 MRIQ9BWK5 157 aa24.97■■□□□ 1.59
UBE2D3-220ENST00000505307 SUGT1Q9Y2Z0 365 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms