RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TP53INP1Q96A56 240 aa6.77□□□□□ -1.33
PDLIM1P4-201ENST00000504327 KLHDC7BQ96G42 594 aa6.77□□□□□ -1.33
PDLIM1P4-201ENST00000504327 SSBP4Q9BWG4 385 aaPredicted RBP6.77□□□□□ -1.33
PDLIM1P4-201ENST00000504327 SEC31BQ9NQW1 1179 aa6.77□□□□□ -1.33
PDLIM1P4-201ENST00000504327 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 NEFLP07196 543 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 PIP4K2BP78356 416 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 VN1R5Q7Z5H4 357 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 KLHL23Q8NBE8 558 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 UBASH3BQ8TF42 649 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 DMRTB1Q96MA1 342 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 SEMA6BQ9H3T3 888 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 AKTIPQ9H8T0 292 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 LIN7BQ9HAP6 207 aa6.76□□□□□ -1.33
PDLIM1P4-201ENST00000504327 DYRK3O43781 588 aa6.75□□□□□ -1.33
PDLIM1P4-201ENST00000504327 ITGB7P26010 798 aa6.75□□□□□ -1.33
PDLIM1P4-201ENST00000504327 NLRP12P59046 1061 aa6.75□□□□□ -1.33
PDLIM1P4-201ENST00000504327 CCNJLQ8IV13 435 aa6.75□□□□□ -1.33
PDLIM1P4-201ENST00000504327 WNT8BQ93098 351 aa6.75□□□□□ -1.33
PDLIM1P4-201ENST00000504327 ALKBH8Q96BT7 664 aaKnown RBP6.75□□□□□ -1.33
PDLIM1P4-201ENST00000504327 TCF12Q99081 682 aa6.75□□□□□ -1.33
PDLIM1P4-201ENST00000504327 GLB1P16278 677 aa6.74□□□□□ -1.33
PDLIM1P4-201ENST00000504327 GRIA4P48058 902 aa6.74□□□□□ -1.33
PDLIM1P4-201ENST00000504327 IKBKEQ14164 716 aa6.74□□□□□ -1.33
PDLIM1P4-201ENST00000504327 SPRED3Q2MJR0 410 aa6.74□□□□□ -1.33
PDLIM1P4-201ENST00000504327 TMEM130Q8N3G9 435 aa6.74□□□□□ -1.33
PDLIM1P4-201ENST00000504327 CCDC74AQ96AQ1 378 aa6.74□□□□□ -1.33
PDLIM1P4-201ENST00000504327 CSRNP1Q96S65 589 aa6.74□□□□□ -1.33
PDLIM1P4-201ENST00000504327 A0A096LPE4 126 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 SOX1O00570 391 aaPredicted RBP6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 C19orf57Q0VDD7 668 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 KIAA0319Q5VV43 1072 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 Q6ZS46 218 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 DNAJC25Q9H1X3 360 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 EHD4Q9H223 541 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 OSGEPQ9NPF4 335 aa6.73□□□□□ -1.33
PDLIM1P4-201ENST00000504327 GADD45BO75293 160 aaPredicted RBP6.72□□□□□ -1.33
PDLIM1P4-201ENST00000504327 ESRRAP11474 423 aaPredicted RBP6.72□□□□□ -1.33
PDLIM1P4-201ENST00000504327 DZIP1LQ8IYY4 767 aaKnown RBP6.72□□□□□ -1.33
PDLIM1P4-201ENST00000504327 EPS8L3Q8TE67 593 aaKnown RBP6.72□□□□□ -1.33
PDLIM1P4-201ENST00000504327 TREHO43280 583 aa6.71□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ARL4DP49703 201 aa6.71□□□□□ -1.34
PDLIM1P4-201ENST00000504327 DSC3Q14574 896 aa6.71□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PI16Q6UXB8 463 aa6.71□□□□□ -1.34
PDLIM1P4-201ENST00000504327 AEBP1Q8IUX7 1158 aa6.71□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PNMA6FA0A0J9YX94 578 aa6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 UBL7Q96S82 380 aaPredicted RBP6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 USP26Q9BXU7 913 aa6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ABCB6Q9NP58 842 aa6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 SHROOM4Q9ULL8 1493 aa6.7□□□□□ -1.34
PDLIM1P4-201ENST00000504327 GSTM4Q03013 218 aa6.69□□□□□ -1.34
PDLIM1P4-201ENST00000504327 GRM2Q14416 872 aa6.69□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ZNF423Q2M1K9 1284 aa6.69□□□□□ -1.34
PDLIM1P4-201ENST00000504327 RUSC1Q9BVN2 902 aa6.69□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ZNF576Q9H609 170 aa6.69□□□□□ -1.34
PDLIM1P4-201ENST00000504327 SOX17Q9H6I2 414 aaPredicted RBP6.69□□□□□ -1.34
PDLIM1P4-201ENST00000504327 LOC100289279A0A1B0GTE1 492 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 LOC105371045A0A1W2PR82 267 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PATL2C9JE40 543 aaKnown RBP6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ITPKAP23677 461 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 MAPK8P45983 427 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PLCB3Q01970 1234 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ENOX2Q16206 610 aaKnown RBP6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PRSS36Q5K4E3 855 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PRPF40BQ6NWY9 871 aaKnown RBP6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 GLIS3Q8NEA6 775 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ASB16Q96NS5 453 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 SETDB2Q96T68 719 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
PDLIM1P4-201ENST00000504327 DLGAP3O95886 979 aa6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 HMGB1P09429 215 aaKnown RBP6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 FMR1Q06787 632 aaKnown RBP eCLIP6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PRR23CQ6ZRP0 262 aa6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ZSCAN29Q8IWY8 852 aaPredicted RBP6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ARMC10Q8N2F6 343 aa6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 NRSN2Q9GZP1 204 aa6.67□□□□□ -1.34
PDLIM1P4-201ENST00000504327 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
PDLIM1P4-201ENST00000504327 B3GALT4O96024 378 aa6.66□□□□□ -1.34
PDLIM1P4-201ENST00000504327 PREPP48147 710 aa6.66□□□□□ -1.34
PDLIM1P4-201ENST00000504327 UTP4Q969X6 686 aaKnown RBP6.66□□□□□ -1.34
PDLIM1P4-201ENST00000504327 FAM46AQ96IP4 442 aaKnown RBP6.66□□□□□ -1.34
PDLIM1P4-201ENST00000504327 NLRP2Q9NX02 1062 aa6.66□□□□□ -1.34
PDLIM1P4-201ENST00000504327 TRAK1Q9UPV9 953 aa6.66□□□□□ -1.34
PDLIM1P4-201ENST00000504327 CTSBP07858 339 aa6.65□□□□□ -1.34
PDLIM1P4-201ENST00000504327 FCGRTP55899 365 aa6.65□□□□□ -1.34
PDLIM1P4-201ENST00000504327 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
PDLIM1P4-201ENST00000504327 ANKRD34AQ69YU3 496 aa6.65□□□□□ -1.34
PDLIM1P4-201ENST00000504327 FDX2Q6P4F2 183 aa6.65□□□□□ -1.34
PDLIM1P4-201ENST00000504327 TRIM56Q9BRZ2 755 aaKnown RBP6.65□□□□□ -1.34
PDLIM1P4-201ENST00000504327 BCO2Q9BYV7 579 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms