RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 ZNF804AQ7Z570 1209 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
COPS4-202ENST00000503682 CDCA5Q96FF9 252 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 ZIC5Q96T25 663 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 MEIS3Q99687 375 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 IL1R1P14778 569 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
COPS4-202ENST00000503682 HUNKP57058 714 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 C15orf52Q6ZUT6 534 aaKnown RBP12.79□□□□□ -0.36
COPS4-202ENST00000503682 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
COPS4-202ENST00000503682 FAM84BQ96KN1 310 aaPredicted RBP12.79□□□□□ -0.36
COPS4-202ENST00000503682 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
COPS4-202ENST00000503682 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
COPS4-202ENST00000503682 AOX1Q06278 1338 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 MYO3BQ8WXR4 1341 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
COPS4-202ENST00000503682 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
COPS4-202ENST00000503682 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 SIL1Q9H173 461 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
COPS4-202ENST00000503682 WBP1LQ9NX94 342 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 THSD7BQ9C0I4 1608 aa12.78□□□□□ -0.36
COPS4-202ENST00000503682 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.36
COPS4-202ENST00000503682 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.36
COPS4-202ENST00000503682 VGLL2Q8N8G2 317 aa12.77□□□□□ -0.36
COPS4-202ENST00000503682 TSKSQ9UJT2 592 aa12.77□□□□□ -0.36
COPS4-202ENST00000503682 PA2G4Q9UQ80 394 aaKnown RBP12.77□□□□□ -0.36
COPS4-202ENST00000503682 HIBADHP31937 336 aaKnown RBP12.76□□□□□ -0.37
COPS4-202ENST00000503682 ECE1P42892 770 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 GRIK5Q16478 980 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 PDE8BO95263 885 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 TRIM27P14373 513 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 LBX1P52954 281 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 C2orf69Q8N8R5 385 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 TDRD7Q8NHU6 1098 aaKnown RBP12.76□□□□□ -0.37
COPS4-202ENST00000503682 AIDAQ96BJ3 306 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 FZD1Q9UP38 647 aa12.76□□□□□ -0.37
COPS4-202ENST00000503682 KIF16BQ96L93 1317 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 ARAP2Q8WZ64 1704 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 EYA2O00167 538 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 BCAMP50895 628 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 CHAF1AQ13111 956 aaPredicted RBP12.75□□□□□ -0.37
COPS4-202ENST00000503682 PRKG1Q13976 671 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 ATG9AQ7Z3C6 839 aa12.75□□□□□ -0.37
COPS4-202ENST00000503682 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
COPS4-202ENST00000503682 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 MFSD14BQ5SR56 506 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
COPS4-202ENST00000503682 RGMBQ6NW40 437 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 FBXO33Q7Z6M2 555 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
COPS4-202ENST00000503682 PITPNM2Q9BZ72 1349 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 CASP8AP2Q9UKL3 1982 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 HSPA8P11142 646 aaKnown RBP12.74□□□□□ -0.37
COPS4-202ENST00000503682 FGFR2P21802 821 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
COPS4-202ENST00000503682 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
COPS4-202ENST00000503682 MAP2K1Q02750 393 aaPredicted RBP12.74□□□□□ -0.37
COPS4-202ENST00000503682 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
COPS4-202ENST00000503682 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
COPS4-202ENST00000503682 FAM205AQ6ZU69 1335 aa12.73□□□□□ -0.37
COPS4-202ENST00000503682 FAM155AB1AL88 458 aaPredicted RBP12.73□□□□□ -0.37
COPS4-202ENST00000503682 UBE2Q2LH0YL09 131 aa12.73□□□□□ -0.37
COPS4-202ENST00000503682 CTCFP49711 727 aaPredicted RBP12.73□□□□□ -0.37
COPS4-202ENST00000503682 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
COPS4-202ENST00000503682 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
COPS4-202ENST00000503682 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
COPS4-202ENST00000503682 TTF2Q9UNY4 1162 aaKnown RBP12.73□□□□□ -0.37
COPS4-202ENST00000503682 PAPPA2Q9BXP8 1791 aa12.72□□□□□ -0.37
COPS4-202ENST00000503682 FRAT2O75474 233 aaPredicted RBP12.72□□□□□ -0.37
COPS4-202ENST00000503682 TTLL12Q14166 644 aaPredicted RBP12.72□□□□□ -0.37
COPS4-202ENST00000503682 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
COPS4-202ENST00000503682 AKAP11Q9UKA4 1901 aa12.71□□□□□ -0.37
COPS4-202ENST00000503682 MAP2K2P36507 400 aa12.71□□□□□ -0.37
COPS4-202ENST00000503682 FKBP1AP62942 108 aaKnown RBP12.71□□□□□ -0.37
COPS4-202ENST00000503682 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.37
COPS4-202ENST00000503682 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
COPS4-202ENST00000503682 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.71□□□□□ -0.37
COPS4-202ENST00000503682 IPO8O15397 1037 aaKnown RBP12.71□□□□□ -0.38
COPS4-202ENST00000503682 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.38
COPS4-202ENST00000503682 KIF23Q02241 960 aaPredicted RBP12.71□□□□□ -0.38
COPS4-202ENST00000503682 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.38
COPS4-202ENST00000503682 DEFB129Q9H1M3 183 aa12.71□□□□□ -0.38
COPS4-202ENST00000503682 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.38
COPS4-202ENST00000503682 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms