RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LGR5O75473 907 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 PAPLNO95428 1278 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 SGO2Q562F6 1265 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 XKR5Q6UX68 686 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 SPOCD1Q6ZMY3 1216 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 NCAPG2Q86XI2 1143 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 BHLHE22Q8NFJ8 381 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 YIPF2Q9BWQ6 316 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 SALL4Q9UJQ4 1053 aa4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 ACIN1Q9UKV3 1341 aaKnown RBP4.95□□□□□ -1.62
HMGB1P35-201ENST00000503360 TNFRSF10BO14763 440 aa4.94□□□□□ -1.62
HMGB1P35-201ENST00000503360 ZAP70P43403 619 aa4.94□□□□□ -1.62
HMGB1P35-201ENST00000503360 STK11IPQ8N1F8 1099 aa4.94□□□□□ -1.62
HMGB1P35-201ENST00000503360 PMEPA1Q969W9 287 aa4.94□□□□□ -1.62
HMGB1P35-201ENST00000503360 FARP2O94887 1054 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 RXRBP28702 533 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 CDC25BP30305 580 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 OCLNQ16625 522 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 EXOSC6Q5RKV6 272 aaKnown RBP4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 ATG4DQ86TL0 474 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 FBXL6Q8N531 539 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 ABTB2Q8N961 1025 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 TMEM102Q8N9M5 508 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 C12orf50Q8NA57 414 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 FLCNQ8NFG4 579 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 GATA6Q92908 595 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 MISP3Q96FF7 219 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 DZANK1Q9NVP4 752 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 PRKAG2Q9UGJ0 569 aa4.93□□□□□ -1.62
HMGB1P35-201ENST00000503360 LOC100289279A0A1B0GTE1 492 aa4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 PDE2AO00408 941 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 NLRP12P59046 1061 aa4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 ELOAQ14241 798 aaKnown RBP4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 NFKBIBQ15653 356 aa4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 DUSP27Q5VZP5 1158 aa4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 SAP130Q9H0E3 1048 aa4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 ELP3Q9H9T3 547 aa4.92□□□□□ -1.62
HMGB1P35-201ENST00000503360 CYP2E1P05181 493 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 LMOD1P29536 600 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 USP11P51784 963 aa4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 FAM26DQ5JW98 314 aa4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 PROSER2Q86WR7 435 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 C2CD4AQ8NCU7 369 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 TMEM40Q8WWA1 233 aa4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 BSNDQ8WZ55 320 aa4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 TBC1D32Q96NH3 1257 aa4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 STIM2Q9P246 746 aa4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 SLC5A6Q9Y289 635 aa4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P35-201ENST00000503360 SOX4Q06945 474 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P35-201ENST00000503360 IKBKEQ14164 716 aa4.9□□□□□ -1.63
HMGB1P35-201ENST00000503360 MAP7Q14244 749 aa4.9□□□□□ -1.63
HMGB1P35-201ENST00000503360 PKN1Q16512 942 aa4.9□□□□□ -1.63
HMGB1P35-201ENST00000503360 CALR3Q96L12 384 aaKnown RBP4.9□□□□□ -1.63
HMGB1P35-201ENST00000503360 CARMIL2Q6F5E8 1435 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 SOX1O00570 391 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 ADMP35318 185 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 HP1BP3Q5SSJ5 553 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZNF648Q5T619 568 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 CDPF1Q6NVV7 123 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 VN1R5Q7Z5H4 357 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 GPR152Q8TDT2 470 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 FBLIM1Q8WUP2 373 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 BCL7CQ8WUZ0 217 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 SLC7A3Q8WY07 619 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 NXPE3Q969Y0 559 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZFYVE1Q9HBF4 777 aa4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZC3H7BQ9UGR2 993 aaKnown RBP4.89□□□□□ -1.63
HMGB1P35-201ENST00000503360 CES1P23141 567 aa4.88□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZNF438Q7Z4V0 828 aa4.88□□□□□ -1.63
HMGB1P35-201ENST00000503360 SHISA5Q8N114 240 aa4.88□□□□□ -1.63
HMGB1P35-201ENST00000503360 BHLHE41Q9C0J9 482 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P35-201ENST00000503360 GSX1Q9H4S2 264 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P35-201ENST00000503360 CNTN3Q9P232 1028 aa4.88□□□□□ -1.63
HMGB1P35-201ENST00000503360 SYNGAP1Q96PV0 1343 aa4.88□□□□□ -1.63
HMGB1P35-201ENST00000503360 FAM170BA6NMN3 283 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 FAM69CQ0P6D2 419 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 ZNF792Q3KQV3 632 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 WFDC3Q8IUB2 231 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 GLIS3Q8NEA6 775 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 NRSN2Q9GZP1 204 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 CXXC1Q9P0U4 656 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 TMEM63CQ9P1W3 806 aa4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 NOVA2Q9UNW9 492 aaKnown RBP4.87□□□□□ -1.63
HMGB1P35-201ENST00000503360 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 DLGAP3O95886 979 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 ADH5P11766 374 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 PCSK2P16519 638 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 FUT4P22083 530 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 PLCL1Q15111 1095 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 CFAP70Q5T0N1 1121 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 OGFOD3Q6PK18 319 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 SEZ6L2Q6UXD5 910 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 KSR1Q8IVT5 923 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 CCER1Q8TC90 406 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 FAM84AQ96KN4 292 aa4.86□□□□□ -1.63
HMGB1P35-201ENST00000503360 PRIMPOLQ96LW4 560 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms