RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TLDC2A0PJX2 215 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 SOX9P48436 509 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 RPS26P62854 115 aaKnown RBP7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 ATP11AP98196 1134 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 FAAP100Q0VG06 881 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 NBPF6Q5VWK0 638 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 GOLM1Q8NBJ4 401 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 NBPF4Q96M43 638 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 PIF1Q9H611 641 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 IGFLR1Q9H665 355 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 ZNF408Q9H9D4 720 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 GPN3Q9UHW5 284 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 PRR12Q9ULL5 1215 aa7.91□□□□□ -1.14
HMGB1P3-201ENST00000502802 TFE3P19532 575 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 CTBSQ01459 385 aa7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 FOXR1Q6PIV2 292 aa7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 TRERF1Q96PN7 1200 aa7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 POP1Q99575 1024 aaKnown RBP7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 UBE2OQ9C0C9 1292 aaKnown RBP7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 MUC3BQ9H195 1237 aa7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 TMEM39AQ9NV64 488 aa7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 UBP1Q9NZI7 540 aa7.9□□□□□ -1.14
HMGB1P3-201ENST00000502802 ROBO2Q9HCK4 1378 aa7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 PAGE1O75459 146 aa7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 SMNDC1O75940 238 aaKnown RBP eCLIP7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 APOBRQ0VD83 1088 aa7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 LAPTM4AQ15012 233 aa7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 SYT9Q86SS6 491 aa7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 NKD1Q969G9 470 aa7.89□□□□□ -1.15
HMGB1P3-201ENST00000502802 EIF2AK2P19525 551 aaKnown RBP7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 LMNB1P20700 586 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 PPP2R3AQ06190 1150 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 TBC1D8BQ0IIM8 1120 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 NFE2L2Q16236 605 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 CEP135Q66GS9 1140 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 FAM196AQ6ZSG2 479 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 SLITRK4Q8IW52 837 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 TRIM42Q8IWZ5 723 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 CPLX3Q8WVH0 158 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 BSNDQ8WZ55 320 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 CLEC4MQ9H2X3 399 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 SAMM50Q9Y512 469 aa7.88□□□□□ -1.15
HMGB1P3-201ENST00000502802 SIN3BO75182 1162 aa7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 ETFBP38117 255 aa7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 ZNF157P51786 506 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 BMS1Q14692 1282 aaKnown RBP7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 ZNF468Q5VIY5 522 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 CCDC84Q86UT8 332 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 MICALL1Q8N3F8 863 aa7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 TRIM47Q96LD4 638 aa7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 MRVI1Q9Y6F6 885 aa7.87□□□□□ -1.15
HMGB1P3-201ENST00000502802 GPR25O00155 361 aa7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 CRKP46108 304 aa7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 SERINC3Q13530 473 aa7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 ZNF746Q6NUN9 644 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 ANKS3Q6ZW76 656 aa7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 MIR1-1HGQ9H1L0 117 aa7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 CYP8B1Q9UNU6 501 aa7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 CDK11AQ9UQ88 783 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 TBX22Q9Y458 520 aa7.86□□□□□ -1.15
HMGB1P3-201ENST00000502802 CDC14CA4D256 554 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 K7ELQ4 463 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 BMP4P12644 408 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 CPB1P15086 417 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 NCLP19338 710 aaKnown RBP7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 BMP6P22004 513 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 NME2P22392 152 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 PCDH1Q08174 1060 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 SDE2Q6IQ49 451 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 FAM35AQ86V20 835 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 GATAD2BQ8WXI9 593 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 TNFRSF25Q93038 417 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 MKL1Q969V6 931 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 PLD4Q96BZ4 506 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 MRFAP1L1Q96HT8 127 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 SRRTQ9BXP5 876 aaKnown RBP7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 LRRC3Q9BY71 257 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 AVENQ9NQS1 362 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 SIRPGQ9P1W8 387 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 SOX13Q9UN79 622 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 PCDHB5Q9Y5E4 795 aa7.85□□□□□ -1.15
HMGB1P3-201ENST00000502802 C2CD2LO14523 706 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 PPFIA3O75145 1194 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 B3GALT4O96024 378 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 F13A1P00488 732 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 PTPRAP18433 802 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 PCBP4P57723 403 aaKnown RBP7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 MPP2Q14168 576 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 LRRC14Q15048 493 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 SEZ6Q53EL9 994 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 BNC2Q6ZN30 1099 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 SV2AQ7L0J3 742 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 VWA5B2Q8N398 1253 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 TRIM55Q9BYV6 548 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 ADAM19Q9H013 955 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 SLC6A14Q9UN76 642 aa7.84□□□□□ -1.15
HMGB1P3-201ENST00000502802 TLR3O15455 904 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms