RNA–Protein interactions for RNA: ENST00000498623.6

ARPC4-208, Transcript of actin related protein 2/3 complex subunit 4, human

TSL 2 BASIC

Gene ARPC4, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARPC4-208	ENST00000498623	TDRD7	Q8NHU6	1098 aa	Known RBP	28.65	■■■□□ 2.18
ARPC4-208	ENST00000498623	FAM84B	Q96KN1	310 aa	Predicted RBP	28.65	■■■□□ 2.18
ARPC4-208	ENST00000498623	HDAC5	Q9UQL6	1122 aa		28.65	■■■□□ 2.18
ARPC4-208	ENST00000498623	PDE8B	O95263	885 aa		28.64	■■■□□ 2.18
ARPC4-208	ENST00000498623	HIBADH	P31937	336 aa	Known RBP	28.64	■■■□□ 2.18
ARPC4-208	ENST00000498623	METTL24	Q5JXM2	366 aa		28.64	■■■□□ 2.18
ARPC4-208	ENST00000498623	KLHDC4	Q8TBB5	520 aa		28.64	■■■□□ 2.18
ARPC4-208	ENST00000498623	GYG1	P46976	350 aa		28.63	■■■□□ 2.17
ARPC4-208	ENST00000498623	CTCF	P49711	727 aa	Predicted RBP	28.63	■■■□□ 2.17
ARPC4-208	ENST00000498623	GRM1	Q13255	1194 aa		28.63	■■■□□ 2.17
ARPC4-208	ENST00000498623	INTS3	Q68E01	1043 aa	Known RBP	28.63	■■■□□ 2.17
ARPC4-208	ENST00000498623	MTMR14	Q8NCE2	650 aa		28.63	■■■□□ 2.17
ARPC4-208	ENST00000498623	EYA2	O00167	538 aa		28.61	■■■□□ 2.17
ARPC4-208	ENST00000498623	IPO8	O15397	1037 aa	Known RBP	28.61	■■■□□ 2.17
ARPC4-208	ENST00000498623	FKBP1B	P68106	108 aa		28.61	■■■□□ 2.17
ARPC4-208	ENST00000498623	PTPN12	Q05209	780 aa	Known RBP	28.61	■■■□□ 2.17
ARPC4-208	ENST00000498623	PRDM10	Q9NQV6	1147 aa		28.61	■■■□□ 2.17
ARPC4-208	ENST00000498623	FBXO3	Q9UK99	471 aa		28.61	■■■□□ 2.17
ARPC4-208	ENST00000498623	AOC2	O75106	756 aa		28.6	■■■□□ 2.17
ARPC4-208	ENST00000498623	RGMB	Q6NW40	437 aa		28.6	■■■□□ 2.17
ARPC4-208	ENST00000498623	FBXO33	Q7Z6M2	555 aa		28.6	■■■□□ 2.17
ARPC4-208	ENST00000498623	COL1A1	P02452	1464 aa	Predicted RBP	28.59	■■■□□ 2.17
ARPC4-208	ENST00000498623	NOG	Q13253	232 aa		28.59	■■■□□ 2.17
ARPC4-208	ENST00000498623	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.59	■■■□□ 2.17
ARPC4-208	ENST00000498623	MEIS3	Q99687	375 aa		28.59	■■■□□ 2.17
ARPC4-208	ENST00000498623	MYH13	Q9UKX3	1938 aa		28.59	■■■□□ 2.17
ARPC4-208	ENST00000498623	TRIM27	P14373	513 aa		28.58	■■■□□ 2.17
ARPC4-208	ENST00000498623	PUM3	Q15397	648 aa	Known RBP	28.58	■■■□□ 2.17
ARPC4-208	ENST00000498623	DLGAP5	Q15398	846 aa		28.58	■■■□□ 2.17
ARPC4-208	ENST00000498623	LRRFIP2	Q9Y608	721 aa	Known RBP	28.58	■■■□□ 2.17
ARPC4-208	ENST00000498623	BCAR3	O75815	825 aa		28.57	■■■□□ 2.16
ARPC4-208	ENST00000498623	CIAO1	O76071	339 aa		28.57	■■■□□ 2.16
ARPC4-208	ENST00000498623	FGFR2	P21802	821 aa		28.57	■■■□□ 2.16
ARPC4-208	ENST00000498623	CAVIN4	Q5BKX8	364 aa		28.57	■■■□□ 2.16
ARPC4-208	ENST00000498623	MFSD14B	Q5SR56	506 aa		28.57	■■■□□ 2.16
ARPC4-208	ENST00000498623	ATF7IP	Q6VMQ6	1270 aa		28.57	■■■□□ 2.16
ARPC4-208	ENST00000498623	JAG2	Q9Y219	1238 aa		28.57	■■■□□ 2.16
ARPC4-208	ENST00000498623	FAM155A	B1AL88	458 aa	Predicted RBP	28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	GNAI3	P08754	354 aa		28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	ZBED9	Q6R2W3	1325 aa		28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	ATG9A	Q7Z3C6	839 aa		28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	VPS37D	Q86XT2	251 aa		28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	CCDC102A	Q96A19	550 aa		28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	BEGAIN	Q9BUH8	593 aa		28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	SCAF8	Q9UPN6	1271 aa	Known RBP	28.56	■■■□□ 2.16
ARPC4-208	ENST00000498623	HSPA8	P11142	646 aa	Known RBP	28.55	■■■□□ 2.16
ARPC4-208	ENST00000498623	SPDYE2B	A6NHP3	402 aa		28.54	■■■□□ 2.16
ARPC4-208	ENST00000498623		F8W031	263 aa	Predicted RBP	28.54	■■■□□ 2.16
ARPC4-208	ENST00000498623	IFIT1	P09914	478 aa	Known RBP	28.54	■■■□□ 2.16
ARPC4-208	ENST00000498623	SPDYE6	P0CI01	402 aa		28.54	■■■□□ 2.16
ARPC4-208	ENST00000498623	CFAP100	Q494V2	611 aa		28.54	■■■□□ 2.16
ARPC4-208	ENST00000498623	TNS4	Q8IZW8	715 aa		28.53	■■■□□ 2.16
ARPC4-208	ENST00000498623	CA12	O43570	354 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	MYO1B	O43795	1136 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	NF2	P35240	595 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	ZNF157	P51786	506 aa	Predicted RBP	28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	LBX1	P52954	281 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	TBC1D22A	Q8WUA7	517 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	LPIN2	Q92539	896 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	FRAT1	Q92837	279 aa	Predicted RBP	28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	COPRS	Q9NQ92	184 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	SERPINA10	Q9UK55	444 aa		28.52	■■■□□ 2.16
ARPC4-208	ENST00000498623	SLC10A3	P09131	477 aa		28.51	■■■□□ 2.15
ARPC4-208	ENST00000498623	MTX1	Q13505	466 aa		28.51	■■■□□ 2.15
ARPC4-208	ENST00000498623	PRAMEF18	Q5VWM3	479 aa		28.51	■■■□□ 2.15
ARPC4-208	ENST00000498623	PRMT6	Q96LA8	375 aa	Predicted RBP	28.51	■■■□□ 2.15
ARPC4-208	ENST00000498623	PCDHAC2	Q9Y5I4	1007 aa		28.51	■■■□□ 2.15
ARPC4-208	ENST00000498623	PPP2R3B	Q9Y5P8	575 aa		28.51	■■■□□ 2.15
ARPC4-208	ENST00000498623	SLC5A1	P13866	664 aa		28.5	■■■□□ 2.15
ARPC4-208	ENST00000498623	IL15	P40933	162 aa	Predicted RBP	28.5	■■■□□ 2.15
ARPC4-208	ENST00000498623	BCAM	P50895	628 aa		28.5	■■■□□ 2.15
ARPC4-208	ENST00000498623	ZIC5	Q96T25	663 aa		28.5	■■■□□ 2.15
ARPC4-208	ENST00000498623	TTF2	Q9UNY4	1162 aa	Known RBP	28.5	■■■□□ 2.15
ARPC4-208	ENST00000498623	AKAP11	Q9UKA4	1901 aa		28.49	■■■□□ 2.15
ARPC4-208	ENST00000498623	ZKSCAN2	Q63HK3	967 aa		28.49	■■■□□ 2.15
ARPC4-208	ENST00000498623	SIL1	Q9H173	461 aa		28.49	■■■□□ 2.15
ARPC4-208	ENST00000498623	DEFB129	Q9H1M3	183 aa		28.49	■■■□□ 2.15
ARPC4-208	ENST00000498623	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	28.49	■■■□□ 2.15
ARPC4-208	ENST00000498623	TNN	Q9UQP3	1299 aa		28.49	■■■□□ 2.15
ARPC4-208	ENST00000498623	CEP126	Q9P2H0	1117 aa		28.48	■■■□□ 2.15
ARPC4-208	ENST00000498623	FRAT2	O75474	233 aa	Predicted RBP	28.47	■■■□□ 2.15
ARPC4-208	ENST00000498623	HDLBP	Q00341	1268 aa	Known RBP	28.47	■■■□□ 2.15
ARPC4-208	ENST00000498623	RASAL3	Q86YV0	1011 aa		28.47	■■■□□ 2.15
ARPC4-208	ENST00000498623	RBM5	P52756	815 aa	Known RBP eCLIP	28.46	■■■□□ 2.15
ARPC4-208	ENST00000498623	CHAF1A	Q13111	956 aa	Predicted RBP	28.46	■■■□□ 2.15
ARPC4-208	ENST00000498623	ATP2B3	Q16720	1220 aa		28.46	■■■□□ 2.15
ARPC4-208	ENST00000498623	MOB2	Q70IA6	237 aa		28.46	■■■□□ 2.15
ARPC4-208	ENST00000498623	CLUAP1	Q96AJ1	413 aa		28.46	■■■□□ 2.15
ARPC4-208	ENST00000498623	PA2G4	Q9UQ80	394 aa	Known RBP	28.46	■■■□□ 2.15
ARPC4-208	ENST00000498623	SUGT1	Q9Y2Z0	365 aa		28.46	■■■□□ 2.15
ARPC4-208	ENST00000498623	AOX1	Q06278	1338 aa		28.45	■■■□□ 2.15
ARPC4-208	ENST00000498623	SRGAP3	O43295	1099 aa		28.45	■■■□□ 2.14
ARPC4-208	ENST00000498623	CLRN2	A0PK11	232 aa		28.44	■■■□□ 2.14
ARPC4-208	ENST00000498623	ZBTB22	O15209	634 aa		28.44	■■■□□ 2.14
ARPC4-208	ENST00000498623	GNAI2	P04899	355 aa		28.44	■■■□□ 2.14
ARPC4-208	ENST00000498623	CRK	P46108	304 aa		28.44	■■■□□ 2.14
ARPC4-208	ENST00000498623	KIF23	Q02241	960 aa	Predicted RBP	28.44	■■■□□ 2.14
ARPC4-208	ENST00000498623	GRIK5	Q16478	980 aa		28.44	■■■□□ 2.14
ARPC4-208	ENST00000498623	SPDYE2	Q495Y8	402 aa		28.44	■■■□□ 2.14
ARPC4-208	ENST00000498623	SSC5D	A1L4H1	1573 aa		28.44	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms