RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FPGT-TNNI3KV9GXZ4 949 aa24.64■■□□□ 1.54
CTSD-206ENST00000497544 TRPM7Q96QT4 1865 aa24.64■■□□□ 1.53
CTSD-206ENST00000497544 DUOX1Q9NRD9 1551 aa24.63■■□□□ 1.53
CTSD-206ENST00000497544 A0A1B0GUL7 405 aa24.63■■□□□ 1.53
CTSD-206ENST00000497544 CYP4F22Q6NT55 531 aa24.63■■□□□ 1.53
CTSD-206ENST00000497544 C15orf52Q6ZUT6 534 aaKnown RBP24.63■■□□□ 1.53
CTSD-206ENST00000497544 JDP2Q8WYK2 163 aa24.63■■□□□ 1.53
CTSD-206ENST00000497544 MED23Q9ULK4 1368 aa24.63■■□□□ 1.53
CTSD-206ENST00000497544 GRM1Q13255 1194 aa24.62■■□□□ 1.53
CTSD-206ENST00000497544 DGKZQ13574 1117 aa24.62■■□□□ 1.53
CTSD-206ENST00000497544 CAVIN4Q5BKX8 364 aa24.62■■□□□ 1.53
CTSD-206ENST00000497544 ANKRD45Q5TZF3 282 aa24.62■■□□□ 1.53
CTSD-206ENST00000497544 PAXIP1Q6ZW49 1069 aaPredicted RBP24.62■■□□□ 1.53
CTSD-206ENST00000497544 TXNRD3Q86VQ6 643 aa24.62■■□□□ 1.53
CTSD-206ENST00000497544 PPP4R2Q9NY27 417 aa24.62■■□□□ 1.53
CTSD-206ENST00000497544 HACL1Q9UJ83 578 aa24.62■■□□□ 1.53
CTSD-206ENST00000497544 SMARCA5O60264 1052 aaPredicted RBP24.61■■□□□ 1.53
CTSD-206ENST00000497544 KLRK1P26718 216 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 EPHX2P34913 555 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 ECE1P42892 770 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 DOK7Q18PE1 504 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 GORABQ5T7V8 394 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 VPS37DQ86XT2 251 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 SMC5Q8IY18 1101 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 NIM1KQ8IY84 436 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 ZNF541Q9H0D2 1346 aa24.61■■□□□ 1.53
CTSD-206ENST00000497544 HIBADHP31937 336 aaKnown RBP24.6■■□□□ 1.53
CTSD-206ENST00000497544 ZNF804AQ7Z570 1209 aa24.6■■□□□ 1.53
CTSD-206ENST00000497544 AACSQ86V21 672 aa24.6■■□□□ 1.53
CTSD-206ENST00000497544 EAF2Q96CJ1 260 aaPredicted RBP24.6■■□□□ 1.53
CTSD-206ENST00000497544 XAGE2Q96GT9 111 aa24.6■■□□□ 1.53
CTSD-206ENST00000497544 FAM84BQ96KN1 310 aaPredicted RBP24.6■■□□□ 1.53
CTSD-206ENST00000497544 COA1Q9GZY4 146 aa24.6■■□□□ 1.53
CTSD-206ENST00000497544 IFIT2P09913 472 aaKnown RBP24.59■■□□□ 1.53
CTSD-206ENST00000497544 GYG1P46976 350 aa24.59■■□□□ 1.53
CTSD-206ENST00000497544 B4GALNT3Q6L9W6 998 aa24.59■■□□□ 1.53
CTSD-206ENST00000497544 CCDC8Q9H0W5 538 aaPredicted RBP24.59■■□□□ 1.53
CTSD-206ENST00000497544 DBNDD1Q9H9R9 158 aa24.59■■□□□ 1.53
CTSD-206ENST00000497544 ADORA1P30542 326 aa24.58■■□□□ 1.53
CTSD-206ENST00000497544 FBXO33Q7Z6M2 555 aa24.58■■□□□ 1.53
CTSD-206ENST00000497544 IRS2Q9Y4H2 1338 aa24.58■■□□□ 1.52
CTSD-206ENST00000497544 AOC2O75106 756 aa24.57■■□□□ 1.52
CTSD-206ENST00000497544 BCAMP50895 628 aa24.57■■□□□ 1.52
CTSD-206ENST00000497544 SOX10P56693 466 aa24.57■■□□□ 1.52
CTSD-206ENST00000497544 FMR1Q06787 632 aaKnown RBP eCLIP24.57■■□□□ 1.52
CTSD-206ENST00000497544 CD209Q9NNX6 404 aa24.57■■□□□ 1.52
CTSD-206ENST00000497544 ZNF609O15014 1411 aa24.57■■□□□ 1.52
CTSD-206ENST00000497544 ECE2O60344 883 aa24.56■■□□□ 1.52
CTSD-206ENST00000497544 PODNQ7Z5L7 613 aa24.56■■□□□ 1.52
CTSD-206ENST00000497544 PNMA8AQ86V59 439 aaPredicted RBP24.56■■□□□ 1.52
CTSD-206ENST00000497544 DBNDD2Q9BQY9 259 aa24.56■■□□□ 1.52
CTSD-206ENST00000497544 GNL3LQ9NVN8 582 aaKnown RBP24.56■■□□□ 1.52
CTSD-206ENST00000497544 ZNRF3Q9ULT6 936 aa24.56■■□□□ 1.52
CTSD-206ENST00000497544 FRAT2O75474 233 aaPredicted RBP24.55■■□□□ 1.52
CTSD-206ENST00000497544 CCDC158Q5M9N0 1113 aa24.55■■□□□ 1.52
CTSD-206ENST00000497544 CCDC102BQ68D86 513 aa24.55■■□□□ 1.52
CTSD-206ENST00000497544 CENPQQ7L2Z9 268 aaPredicted RBP24.54■■□□□ 1.52
CTSD-206ENST00000497544 CA12O43570 354 aa24.53■■□□□ 1.52
CTSD-206ENST00000497544 MAP2K2P36507 400 aa24.53■■□□□ 1.52
CTSD-206ENST00000497544 PHKA1P46020 1223 aa24.53■■□□□ 1.52
CTSD-206ENST00000497544 EIF6P56537 245 aaKnown RBP24.53■■□□□ 1.52
CTSD-206ENST00000497544 DBNLQ9UJU6 430 aaKnown RBP24.53■■□□□ 1.52
CTSD-206ENST00000497544 FZD9O00144 591 aa24.52■■□□□ 1.52
CTSD-206ENST00000497544 IL1R1P14778 569 aa24.52■■□□□ 1.52
CTSD-206ENST00000497544 NUCB1Q02818 461 aa24.52■■□□□ 1.52
CTSD-206ENST00000497544 TTC39AQ5SRH9 613 aa24.52■■□□□ 1.52
CTSD-206ENST00000497544 CHD1LQ86WJ1 897 aa24.52■■□□□ 1.52
CTSD-206ENST00000497544 TDRD7Q8NHU6 1098 aaKnown RBP24.52■■□□□ 1.52
CTSD-206ENST00000497544 LNPKQ9C0E8 428 aa24.52■■□□□ 1.52
CTSD-206ENST00000497544 TLR7Q9NYK1 1049 aaKnown RBP24.52■■□□□ 1.52
CTSD-206ENST00000497544 IQSEC3Q9UPP2 1182 aaPredicted RBP24.52■■□□□ 1.52
CTSD-206ENST00000497544 YDJCA8MPS7 323 aa24.51■■□□□ 1.51
CTSD-206ENST00000497544 UQCRFS1P1P0C7P4 283 aa24.5■■□□□ 1.51
CTSD-206ENST00000497544 FBXW7Q969H0 707 aa24.5■■□□□ 1.51
CTSD-206ENST00000497544 TLL2Q9Y6L7 1015 aa24.5■■□□□ 1.51
CTSD-206ENST00000497544 COL4A5P29400 1685 aa24.5■■□□□ 1.51
CTSD-206ENST00000497544 ARAP2Q8WZ64 1704 aa24.49■■□□□ 1.51
CTSD-206ENST00000497544 RAD17O75943 681 aa24.49■■□□□ 1.51
CTSD-206ENST00000497544 TNIP1Q15025 636 aa24.49■■□□□ 1.51
CTSD-206ENST00000497544 CST9Q5W186 159 aa24.49■■□□□ 1.51
CTSD-206ENST00000497544 TTLL5Q6EMB2 1281 aa24.49■■□□□ 1.51
CTSD-206ENST00000497544 CIAPIN1Q6FI81 312 aa24.49■■□□□ 1.51
CTSD-206ENST00000497544 KCNQ5Q9NR82 932 aa24.49■■□□□ 1.51
CTSD-206ENST00000497544 USP17L3A6NCW0 530 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 USP17L4A6NCW7 530 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 SEMA3EO15041 775 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 GTF2IP78347 998 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 CXCL9Q07325 125 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 USP17L1Q7RTZ2 530 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 GPATCH3Q96I76 525 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 DENND2AQ9ULE3 1009 aa24.48■■□□□ 1.51
CTSD-206ENST00000497544 ARID4AP29374 1257 aaPredicted RBP24.46■■□□□ 1.51
CTSD-206ENST00000497544 CHAF1AQ13111 956 aaPredicted RBP24.46■■□□□ 1.51
CTSD-206ENST00000497544 STRIP1Q5VSL9 837 aa24.46■■□□□ 1.51
CTSD-206ENST00000497544 ZNF512BQ96KM6 892 aaPredicted RBP24.46■■□□□ 1.51
CTSD-206ENST00000497544 ECHDC1Q9NTX5 307 aa24.45■■□□□ 1.5
CTSD-206ENST00000497544 GJA3Q9Y6H8 435 aa24.45■■□□□ 1.5
CTSD-206ENST00000497544 SCN9AQ15858 1988 aa24.45■■□□□ 1.5
CTSD-206ENST00000497544 FAM205AQ6ZU69 1335 aa24.44■■□□□ 1.5
CTSD-206ENST00000497544 TRAF5O00463 557 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms