RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PUS3Q9BZE2 481 aaKnown RBP16.33■□□□□ 0.2
FN1-226ENST00000496542 BICC1Q9H694 974 aaKnown RBP16.33■□□□□ 0.2
FN1-226ENST00000496542 PTPRCP08575 1304 aa16.33■□□□□ 0.2
FN1-226ENST00000496542 UBE2Q2LH0YL09 131 aa16.32■□□□□ 0.2
FN1-226ENST00000496542 UTYO14607 1347 aa16.32■□□□□ 0.2
FN1-226ENST00000496542 NF2P35240 595 aa16.32■□□□□ 0.2
FN1-226ENST00000496542 DLGAP5Q15398 846 aa16.32■□□□□ 0.2
FN1-226ENST00000496542 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
FN1-226ENST00000496542 ECM29Q5VYK3 1845 aa16.31■□□□□ 0.2
FN1-226ENST00000496542 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
FN1-226ENST00000496542 GYG1P46976 350 aa16.3■□□□□ 0.2
FN1-226ENST00000496542 UBE4AQ14139 1066 aa16.3■□□□□ 0.2
FN1-226ENST00000496542 ANKRD44Q8N8A2 993 aa16.3■□□□□ 0.2
FN1-226ENST00000496542 SMC4Q9NTJ3 1288 aa16.3■□□□□ 0.2
FN1-226ENST00000496542 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
FN1-226ENST00000496542 PCDHAC2Q9Y5I4 1007 aa16.3■□□□□ 0.2
FN1-226ENST00000496542 MROH5Q6ZUA9 1318 aa16.29■□□□□ 0.2
FN1-226ENST00000496542 TRPA1O75762 1119 aa16.29■□□□□ 0.2
FN1-226ENST00000496542 PRKG1Q13976 671 aa16.29■□□□□ 0.2
FN1-226ENST00000496542 RABL6Q3YEC7 729 aaPredicted RBP16.29■□□□□ 0.2
FN1-226ENST00000496542 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
FN1-226ENST00000496542 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
FN1-226ENST00000496542 RNF186Q9NXI6 227 aa16.29■□□□□ 0.2
FN1-226ENST00000496542 HIBADHP31937 336 aaKnown RBP16.28■□□□□ 0.2
FN1-226ENST00000496542 FKBP1AP62942 108 aaKnown RBP16.28■□□□□ 0.2
FN1-226ENST00000496542 METTL24Q5JXM2 366 aa16.28■□□□□ 0.2
FN1-226ENST00000496542 MTMR14Q8NCE2 650 aa16.28■□□□□ 0.2
FN1-226ENST00000496542 RIPOR2Q9Y4F9 1068 aa16.28■□□□□ 0.2
FN1-226ENST00000496542 COL1A1P02452 1464 aaPredicted RBP16.28■□□□□ 0.2
FN1-226ENST00000496542 ARAP2Q8WZ64 1704 aa16.28■□□□□ 0.2
FN1-226ENST00000496542 FAM205AQ6ZU69 1335 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 CLRN2A0PK11 232 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 MYO1BO43795 1136 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.2
FN1-226ENST00000496542 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 LRRC24Q50LG9 513 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 MFSD14BQ5SR56 506 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 ARMC9Q7Z3E5 817 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.2
FN1-226ENST00000496542 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
FN1-226ENST00000496542 MCOLN1Q9GZU1 580 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 USP44Q9H0E7 712 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 DEFB129Q9H1M3 183 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
FN1-226ENST00000496542 AOX1Q06278 1338 aa16.26■□□□□ 0.19
FN1-226ENST00000496542 CCDC85CA6NKD9 419 aa16.26■□□□□ 0.19
FN1-226ENST00000496542 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
FN1-226ENST00000496542 DGKZQ13574 1117 aa16.26■□□□□ 0.19
FN1-226ENST00000496542 VPS37DQ86XT2 251 aa16.26■□□□□ 0.19
FN1-226ENST00000496542 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
FN1-226ENST00000496542 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
FN1-226ENST00000496542 PTPN12Q05209 780 aaKnown RBP16.25■□□□□ 0.19
FN1-226ENST00000496542 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
FN1-226ENST00000496542 ANGEL1Q9UNK9 670 aaKnown RBP16.25■□□□□ 0.19
FN1-226ENST00000496542 TTF2Q9UNY4 1162 aaKnown RBP16.25■□□□□ 0.19
FN1-226ENST00000496542 FZD1Q9UP38 647 aa16.25■□□□□ 0.19
FN1-226ENST00000496542 IQSEC3Q9UPP2 1182 aaPredicted RBP16.25■□□□□ 0.19
FN1-226ENST00000496542 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
FN1-226ENST00000496542 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
FN1-226ENST00000496542 TRMT2AQ8IZ69 625 aaKnown RBP16.24■□□□□ 0.19
FN1-226ENST00000496542 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
FN1-226ENST00000496542 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
FN1-226ENST00000496542 SSC5DA1L4H1 1573 aa16.24■□□□□ 0.19
FN1-226ENST00000496542 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
FN1-226ENST00000496542 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
FN1-226ENST00000496542 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
FN1-226ENST00000496542 VGLL2Q8N8G2 317 aa16.23■□□□□ 0.19
FN1-226ENST00000496542 PDE8BO95263 885 aa16.22■□□□□ 0.19
FN1-226ENST00000496542 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
FN1-226ENST00000496542 LDLRAD1Q5T700 205 aa16.22■□□□□ 0.19
FN1-226ENST00000496542 SERPINA10Q9UK55 444 aa16.22■□□□□ 0.19
FN1-226ENST00000496542 NOB1Q9ULX3 412 aaKnown RBP16.22■□□□□ 0.19
FN1-226ENST00000496542 MYH13Q9UKX3 1938 aa16.21■□□□□ 0.19
FN1-226ENST00000496542 PPP1R12BO60237 982 aaPredicted RBP16.21■□□□□ 0.19
FN1-226ENST00000496542 UBTFL1P0CB47 393 aaPredicted RBP16.21■□□□□ 0.19
FN1-226ENST00000496542 PUM3Q15397 648 aaKnown RBP16.21■□□□□ 0.19
FN1-226ENST00000496542 SUPT20HL1Q3ZLR7 823 aa16.21■□□□□ 0.19
FN1-226ENST00000496542 NBPF12Q5TAG4 269 aaPredicted RBP16.21■□□□□ 0.19
FN1-226ENST00000496542 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
FN1-226ENST00000496542 EYA2O00167 538 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 TBC1D8O95759 1140 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
FN1-226ENST00000496542 CRKP46108 304 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
FN1-226ENST00000496542 BCAMP50895 628 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 SREBF2Q12772 1141 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 TNFAIP1Q13829 316 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 RASA3Q14644 834 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 GRIK5Q16478 980 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 SPRYD7Q5W111 196 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 DZIP1LQ8IYY4 767 aaKnown RBP16.2■□□□□ 0.18
FN1-226ENST00000496542 SLC10A4Q96EP9 437 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 CLMNQ96JQ2 1002 aa16.2■□□□□ 0.18
FN1-226ENST00000496542 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
FN1-226ENST00000496542 TDRD3Q9H7E2 651 aaKnown RBP16.2■□□□□ 0.18
FN1-226ENST00000496542 TM4SF4P48230 202 aa16.19■□□□□ 0.18
FN1-226ENST00000496542 MAP3K11Q16584 847 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms