RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 SH3RF1Q7Z6J0 888 aa12.97□□□□□ -0.33
RAB11FIP3-211ENST00000495663 NPM2Q86SE8 214 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP3-211ENST00000495663 PROCA1Q8NCQ7 364 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-211ENST00000495663 LRRN4Q8WUT4 740 aa12.97□□□□□ -0.33
RAB11FIP3-211ENST00000495663 WIPF1O43516 503 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 FSHRP23945 695 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 SSFA2P28290 1259 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 NR5A1Q13285 461 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 FLAD1Q8NFF5 587 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 C1QTNF2Q9BXJ5 285 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 STK31Q9BXU1 1019 aa12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-211ENST00000495663 COL15A1P39059 1388 aa12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 MYL6BP14649 208 aa12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 EIF5P55010 431 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-211ENST00000495663 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
RAB11FIP3-211ENST00000495663 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
RAB11FIP3-211ENST00000495663 VASH1Q7L8A9 365 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP3-211ENST00000495663 SLC16A10Q8TF71 515 aa12.94□□□□□ -0.34
RAB11FIP3-211ENST00000495663 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 A0A087WZG4 1122 aa12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 RFC4P35249 363 aa12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 HYPKQ9NX55 129 aa12.93□□□□□ -0.34
RAB11FIP3-211ENST00000495663 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-211ENST00000495663 ANXA1P04083 346 aa12.92□□□□□ -0.34
RAB11FIP3-211ENST00000495663 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
RAB11FIP3-211ENST00000495663 ALDH1L2Q3SY69 923 aa12.92□□□□□ -0.34
RAB11FIP3-211ENST00000495663 SH3D19Q5HYK7 790 aa12.92□□□□□ -0.34
RAB11FIP3-211ENST00000495663 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
RAB11FIP3-211ENST00000495663 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
RAB11FIP3-211ENST00000495663 NUP98P52948 1817 aa12.91□□□□□ -0.34
RAB11FIP3-211ENST00000495663 LRP10Q7Z4F1 713 aa12.91□□□□□ -0.34
RAB11FIP3-211ENST00000495663 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-211ENST00000495663 ARXQ96QS3 562 aa12.91□□□□□ -0.34
RAB11FIP3-211ENST00000495663 ARFGEF2Q9Y6D5 1785 aa12.91□□□□□ -0.34
RAB11FIP3-211ENST00000495663 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
RAB11FIP3-211ENST00000495663 INSM1Q01101 510 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP3-211ENST00000495663 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
RAB11FIP3-211ENST00000495663 COPS6Q7L5N1 327 aa12.9□□□□□ -0.34
RAB11FIP3-211ENST00000495663 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
RAB11FIP3-211ENST00000495663 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
RAB11FIP3-211ENST00000495663 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
RAB11FIP3-211ENST00000495663 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 RARSP54136 660 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 NR6A1Q15406 480 aa12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 ERFEQ4G0M1 354 aa12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 TRMT44Q8IYL2 757 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 XAGE3Q8WTP9 111 aa12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
RAB11FIP3-211ENST00000495663 DDX58O95786 925 aaKnown RBP12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 GMPRP36959 345 aa12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 TTLL7Q6ZT98 887 aa12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 MAP4K5Q9Y4K4 846 aa12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
RAB11FIP3-211ENST00000495663 ERVV-1B6SEH8 477 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 H3BM21 787 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 AP1G2O75843 785 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 BMP2P12643 396 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 FLIIQ13045 1269 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 G2E3Q7L622 706 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 MEIOBQ8N635 442 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 ARHGAP9Q9BRR9 750 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 ZNF652Q9Y2D9 606 aa12.87□□□□□ -0.35
RAB11FIP3-211ENST00000495663 GYS1P13807 737 aa12.86□□□□□ -0.35
RAB11FIP3-211ENST00000495663 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP3-211ENST00000495663 FKBP5Q13451 457 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP3-211ENST00000495663 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
RAB11FIP3-211ENST00000495663 LINC00528Q8N1L1 170 aa12.86□□□□□ -0.35
RAB11FIP3-211ENST00000495663 PLBD2Q8NHP8 589 aa12.86□□□□□ -0.35
RAB11FIP3-211ENST00000495663 KIF16BQ96L93 1317 aa12.86□□□□□ -0.35
RAB11FIP3-211ENST00000495663 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 MAN1A2O60476 641 aa12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 CCDC116Q8IYX3 515 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms