RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SIL1Q9H173 461 aa12.98□□□□□ -0.33
TRAPPC12-222ENST00000493792 HPS5Q9UPZ3 1129 aa12.98□□□□□ -0.33
TRAPPC12-222ENST00000493792 MS4A1P11836 297 aa12.97□□□□□ -0.33
TRAPPC12-222ENST00000493792 RLBP1P12271 317 aa12.97□□□□□ -0.33
TRAPPC12-222ENST00000493792 KLRK1P26718 216 aa12.97□□□□□ -0.33
TRAPPC12-222ENST00000493792 LRRC24Q50LG9 513 aa12.97□□□□□ -0.33
TRAPPC12-222ENST00000493792 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
TRAPPC12-222ENST00000493792 SRGAP3O43295 1099 aa12.96□□□□□ -0.33
TRAPPC12-222ENST00000493792 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-222ENST00000493792 TXNRD3Q86VQ6 643 aa12.96□□□□□ -0.33
TRAPPC12-222ENST00000493792 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-222ENST00000493792 DCPSQ96C86 337 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-222ENST00000493792 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
TRAPPC12-222ENST00000493792 ASTN2O75129 1339 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC12-222ENST00000493792 EYA2O00167 538 aa12.95□□□□□ -0.34
TRAPPC12-222ENST00000493792 VIL1P09327 827 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-222ENST00000493792 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
TRAPPC12-222ENST00000493792 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
TRAPPC12-222ENST00000493792 PA2G4Q9UQ80 394 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-222ENST00000493792 RIPOR2Q9Y4F9 1068 aa12.95□□□□□ -0.34
TRAPPC12-222ENST00000493792 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 RFX5P48382 616 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 PKN2Q16513 984 aaKnown RBP12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 PODNQ7Z5L7 613 aa12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
TRAPPC12-222ENST00000493792 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-222ENST00000493792 UBE4AQ14139 1066 aa12.93□□□□□ -0.34
TRAPPC12-222ENST00000493792 VPS37DQ86XT2 251 aa12.93□□□□□ -0.34
TRAPPC12-222ENST00000493792 RASAL3Q86YV0 1011 aa12.93□□□□□ -0.34
TRAPPC12-222ENST00000493792 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-222ENST00000493792 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
TRAPPC12-222ENST00000493792 CEP126Q9P2H0 1117 aa12.93□□□□□ -0.34
TRAPPC12-222ENST00000493792 SCN9AQ15858 1988 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 ZNF609O15014 1411 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 FRAT2O75474 233 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 PDE8BO95263 885 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 TBC1D8O95759 1140 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 GYG1P46976 350 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 ZNF280AP59817 542 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 GTF2IP78347 998 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 RSBN1LQ6PCB5 846 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 AGBL3Q8NEM8 1001 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 CD209Q9NNX6 404 aa12.92□□□□□ -0.34
TRAPPC12-222ENST00000493792 PNMA6EA0A0J9YXQ4 647 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 ZBTB7BO15156 539 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 CIAO1O76071 339 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 IFIT1P09914 478 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 SLC5A1P13866 664 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 HIBADHP31937 336 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 MVPQ14764 893 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 PUM3Q15397 648 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 CAVIN4Q5BKX8 364 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 C15orf52Q6ZUT6 534 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 SULF1Q8IWU6 871 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 GMLQ99445 158 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 MXD3Q9BW11 206 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 GGA3Q9NZ52 723 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 JAG2Q9Y219 1238 aa12.91□□□□□ -0.34
TRAPPC12-222ENST00000493792 TM4SF4P48230 202 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 FKBP1BP68106 108 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 MTX1Q13505 466 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 SCARF1Q14162 830 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 HABP4Q5JVS0 413 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 COPRSQ9NQ92 184 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-222ENST00000493792 GPR25O00155 361 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 ATP8B2P98198 1209 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 DACT2Q5SW24 774 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 C20orf194Q5TEA3 1177 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 ANGEL2Q5VTE6 544 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 OGFOD1Q8N543 542 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 VGLL2Q8N8G2 317 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 FAM84BQ96KN1 310 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 HDAC9Q9UKV0 1011 aa12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 POLR2AP24928 1970 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-222ENST00000493792 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 PSME4Q14997 1843 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
TRAPPC12-222ENST00000493792 IL1R1P14778 569 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms