RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 POLR3DP05423 398 aaPredicted RBP6.57□□□□□ -1.36
VPS36-205ENST00000492650 SSTR4P31391 388 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 ANKRD34AQ69YU3 496 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 FDX2Q6P4F2 183 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 GJD3Q8N144 294 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 KCNF1Q9H3M0 494 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 ZFYVE28Q9HCC9 887 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 LATS2Q9NRM7 1088 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 PCMTD2Q9NV79 361 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 BRPF3Q9ULD4 1205 aa6.57□□□□□ -1.36
VPS36-205ENST00000492650 HMX2A2RU54 273 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 H3BRB1 525 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 ICMTO60725 284 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 VN1R5Q7Z5H4 357 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 GLYCTKQ8IVS8 523 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 TRIM42Q8IWZ5 723 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 MYRFLQ96LU7 910 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 USP26Q9BXU7 913 aa6.56□□□□□ -1.36
VPS36-205ENST00000492650 TUT1Q9H6E5 874 aaKnown RBP6.56□□□□□ -1.36
VPS36-205ENST00000492650 BMP3P12645 472 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 PREPP48147 710 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 SERPINB4P48594 390 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 NFIAQ12857 509 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 PEAR1Q5VY43 1037 aaPredicted RBP6.55□□□□□ -1.36
VPS36-205ENST00000492650 NUTM2GQ5VZR2 741 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 C7orf69Q9H7B7 122 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 EGFL7Q9UHF1 273 aa6.55□□□□□ -1.36
VPS36-205ENST00000492650 METTL12A8MUP2 240 aa6.54□□□□□ -1.36
VPS36-205ENST00000492650 GAS2O43903 313 aaKnown RBP6.54□□□□□ -1.36
VPS36-205ENST00000492650 GSTM4Q03013 218 aa6.54□□□□□ -1.36
VPS36-205ENST00000492650 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
VPS36-205ENST00000492650 FAM20CQ8IXL6 584 aa6.54□□□□□ -1.36
VPS36-205ENST00000492650 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
VPS36-205ENST00000492650 BHLHE41Q9C0J9 482 aaPredicted RBP6.54□□□□□ -1.36
VPS36-205ENST00000492650 TGFB1P01137 390 aa6.53□□□□□ -1.36
VPS36-205ENST00000492650 NEFLP07196 543 aa6.53□□□□□ -1.36
VPS36-205ENST00000492650 ESRRAP11474 423 aaPredicted RBP6.53□□□□□ -1.36
VPS36-205ENST00000492650 RNF43Q68DV7 783 aa6.53□□□□□ -1.36
VPS36-205ENST00000492650 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.53□□□□□ -1.36
VPS36-205ENST00000492650 CLEC10AQ8IUN9 316 aa6.53□□□□□ -1.36
VPS36-205ENST00000492650 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
VPS36-205ENST00000492650 FAM83CQ9BQN1 747 aa6.53□□□□□ -1.36
VPS36-205ENST00000492650 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 A0A1W2PP55 124 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 MEGF11A6BM72 1044 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 SUPT5HO00267 1087 aaKnown RBP6.52□□□□□ -1.37
VPS36-205ENST00000492650 NDUFB5O43674 189 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 COBLO75128 1261 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 RXRBP28702 533 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 DBNDD2Q9BQY9 259 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 SOX17Q9H6I2 414 aaPredicted RBP6.52□□□□□ -1.37
VPS36-205ENST00000492650 LIN7BQ9HAP6 207 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 CYP4F12Q9HCS2 524 aa6.52□□□□□ -1.37
VPS36-205ENST00000492650 A0A096LPE4 126 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 LOC100289279A0A1B0GTE1 492 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 A0A1W2PPZ6 126 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 CD97P48960 835 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 EXOSC6Q5RKV6 272 aaKnown RBP6.51□□□□□ -1.37
VPS36-205ENST00000492650 ZDHHC13Q8IUH4 622 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 GALNT12Q8IXK2 581 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 TMC1Q8TDI8 760 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 HIF3AQ9Y2N7 669 aa6.51□□□□□ -1.37
VPS36-205ENST00000492650 MAP4P27816 1152 aaKnown RBP6.5□□□□□ -1.37
VPS36-205ENST00000492650 GRIK1P39086 918 aa6.5□□□□□ -1.37
VPS36-205ENST00000492650 PDE3BQ13370 1112 aa6.5□□□□□ -1.37
VPS36-205ENST00000492650 ECM1Q16610 540 aa6.5□□□□□ -1.37
VPS36-205ENST00000492650 SPRED3Q2MJR0 410 aa6.5□□□□□ -1.37
VPS36-205ENST00000492650 SGO2Q562F6 1265 aa6.5□□□□□ -1.37
VPS36-205ENST00000492650 USPL1Q5W0Q7 1092 aa6.5□□□□□ -1.37
VPS36-205ENST00000492650 SMG8Q8ND04 991 aaKnown RBP6.5□□□□□ -1.37
VPS36-205ENST00000492650 TMPRSS13Q9BYE2 586 aa6.5□□□□□ -1.37
VPS36-205ENST00000492650 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
VPS36-205ENST00000492650 MED26O95402 600 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 DLGAP3O95886 979 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 DRD2P14416 443 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 GRIA4P48058 902 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 USP11P51784 963 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 ARHGAP4P98171 946 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 PCDH1Q08174 1060 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 CCNJLQ8IV13 435 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 RETREG2Q8NC44 543 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 SHKBP1Q8TBC3 707 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 EHD4Q9H223 541 aa6.49□□□□□ -1.37
VPS36-205ENST00000492650 CLEC4MQ9H2X3 399 aaPredicted RBP6.49□□□□□ -1.37
VPS36-205ENST00000492650 WDR64B1ANS9 1081 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 CPNE3O75131 537 aaKnown RBP6.48□□□□□ -1.37
VPS36-205ENST00000492650 PDE4CQ08493 712 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 ORC1Q13415 861 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 ZNF423Q2M1K9 1284 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 INTS5Q6P9B9 1019 aaKnown RBP6.48□□□□□ -1.37
VPS36-205ENST00000492650 ERICH6Q7L0X2 663 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 FBXL6Q8N531 539 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 MFSD14AQ96MC6 490 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 TCF12Q99081 682 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 SUGCTQ9HAC7 445 aa6.48□□□□□ -1.37
VPS36-205ENST00000492650 TIAF1O95411 115 aa6.47□□□□□ -1.37
VPS36-205ENST00000492650 CYP11A1P05108 521 aa6.47□□□□□ -1.37
VPS36-205ENST00000492650 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
VPS36-205ENST00000492650 GIMAP7Q8NHV1 300 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms