RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
SSR1-210ENST00000489567 GMLQ99445 158 aa9.73□□□□□ -0.85
SSR1-210ENST00000489567 CHMP4BQ9H444 224 aaKnown RBP9.73□□□□□ -0.85
SSR1-210ENST00000489567 PSME4Q14997 1843 aa9.73□□□□□ -0.85
SSR1-210ENST00000489567 SCN4AP35499 1836 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 A0A1B0GUL7 405 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 IQCA1LA6NCM1 817 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 SLC5A1P13866 664 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 STRIP1Q5VSL9 837 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 MICALL2Q8IY33 904 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 CERS5Q8N5B7 392 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 CNOT7Q9UIV1 285 aaKnown RBP9.72□□□□□ -0.85
SSR1-210ENST00000489567 ZNF609O15014 1411 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 TOMM70O94826 608 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 PHKA1P46020 1223 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 IRX6P78412 446 aaPredicted RBP9.72□□□□□ -0.85
SSR1-210ENST00000489567 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
SSR1-210ENST00000489567 TRPM4Q8TD43 1214 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 DPF2Q92785 391 aa9.72□□□□□ -0.85
SSR1-210ENST00000489567 COL1A1P02452 1464 aaPredicted RBP9.71□□□□□ -0.85
SSR1-210ENST00000489567 RPS12P25398 132 aaKnown RBP9.71□□□□□ -0.85
SSR1-210ENST00000489567 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.85
SSR1-210ENST00000489567 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.85
SSR1-210ENST00000489567 EAPPQ56P03 285 aaPredicted RBP9.71□□□□□ -0.85
SSR1-210ENST00000489567 CAVIN4Q5BKX8 364 aa9.71□□□□□ -0.85
SSR1-210ENST00000489567 SAMD7Q7Z3H4 446 aa9.71□□□□□ -0.85
SSR1-210ENST00000489567 VPS37DQ86XT2 251 aa9.71□□□□□ -0.85
SSR1-210ENST00000489567 AGBL3Q8NEM8 1001 aa9.71□□□□□ -0.85
SSR1-210ENST00000489567 EXOC6Q8TAG9 804 aa9.71□□□□□ -0.85
SSR1-210ENST00000489567 XAGE2Q96GT9 111 aa9.71□□□□□ -0.85
SSR1-210ENST00000489567 ARAP2Q8WZ64 1704 aa9.71□□□□□ -0.86
SSR1-210ENST00000489567 FAM205AQ6ZU69 1335 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 APBB1O00213 710 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 GRIK5Q16478 980 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 TNNI3KQ59H18 835 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 NEUROD6Q96NK8 337 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 ADARB2Q9NS39 739 aaKnown RBP9.7□□□□□ -0.86
SSR1-210ENST00000489567 AKAP2Q9Y2D5 859 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 FPGT-TNNI3KV9GXZ4 949 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 ADAMTSL1Q8N6G6 1762 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 HMMRO75330 724 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 ZNF280AP59817 542 aaPredicted RBP9.7□□□□□ -0.86
SSR1-210ENST00000489567 C1QTNF8P60827 252 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 CHAF1AQ13111 956 aaPredicted RBP9.7□□□□□ -0.86
SSR1-210ENST00000489567 TBC1D10BQ4KMP7 808 aaPredicted RBP9.7□□□□□ -0.86
SSR1-210ENST00000489567 KIAA0825Q8IV33 1275 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 C16orf71Q8IYS4 520 aaPredicted RBP9.7□□□□□ -0.86
SSR1-210ENST00000489567 RHPN1Q8TCX5 695 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 EAF2Q96CJ1 260 aaPredicted RBP9.7□□□□□ -0.86
SSR1-210ENST00000489567 IL1RAPL2Q9NP60 686 aa9.7□□□□□ -0.86
SSR1-210ENST00000489567 TLR7Q9NYK1 1049 aaKnown RBP9.7□□□□□ -0.86
SSR1-210ENST00000489567 ASTN2O75129 1339 aaPredicted RBP9.69□□□□□ -0.86
SSR1-210ENST00000489567 F8W031 263 aaPredicted RBP9.69□□□□□ -0.86
SSR1-210ENST00000489567 H7C1D1 291 aa9.69□□□□□ -0.86
SSR1-210ENST00000489567 USP17L8P0C7I0 530 aa9.69□□□□□ -0.86
SSR1-210ENST00000489567 MFSD14BQ5SR56 506 aa9.69□□□□□ -0.86
SSR1-210ENST00000489567 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
SSR1-210ENST00000489567 USP50Q70EL3 339 aaPredicted RBP9.69□□□□□ -0.86
SSR1-210ENST00000489567 PNMA8AQ86V59 439 aaPredicted RBP9.69□□□□□ -0.86
SSR1-210ENST00000489567 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
SSR1-210ENST00000489567 DBNDD2Q9BQY9 259 aa9.69□□□□□ -0.86
SSR1-210ENST00000489567 GPR108Q9NPR9 543 aa9.69□□□□□ -0.86
SSR1-210ENST00000489567 FRAT2O75474 233 aaPredicted RBP9.68□□□□□ -0.86
SSR1-210ENST00000489567 SCARF1Q14162 830 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 MAP1SQ66K74 1059 aaPredicted RBP9.68□□□□□ -0.86
SSR1-210ENST00000489567 LDHDQ86WU2 507 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 CCDC8Q9H0W5 538 aaPredicted RBP9.68□□□□□ -0.86
SSR1-210ENST00000489567 DBNLQ9UJU6 430 aaKnown RBP9.68□□□□□ -0.86
SSR1-210ENST00000489567 PCDHAC2Q9Y5I4 1007 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 MYO3BQ8WXR4 1341 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 RASGRF1Q13972 1273 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 PI16Q6UXB8 463 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 MYOZ2Q9NPC6 264 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 CLEC11AQ9Y240 323 aa9.68□□□□□ -0.86
SSR1-210ENST00000489567 SMARCA5O60264 1052 aaPredicted RBP9.67□□□□□ -0.86
SSR1-210ENST00000489567 FKBP1AP62942 108 aaKnown RBP9.67□□□□□ -0.86
SSR1-210ENST00000489567 FMR1Q06787 632 aaKnown RBP eCLIP9.67□□□□□ -0.86
SSR1-210ENST00000489567 HSP90AB4PQ58FF6 505 aa9.67□□□□□ -0.86
SSR1-210ENST00000489567 AACSQ86V21 672 aa9.67□□□□□ -0.86
SSR1-210ENST00000489567 ERC1Q8IUD2 1116 aa9.67□□□□□ -0.86
SSR1-210ENST00000489567 SMC1BQ8NDV3 1235 aa9.67□□□□□ -0.86
SSR1-210ENST00000489567 KIF1BPQ96EK5 621 aa9.67□□□□□ -0.86
SSR1-210ENST00000489567 DCTPP1Q9H773 170 aa9.67□□□□□ -0.86
SSR1-210ENST00000489567 AOX1Q06278 1338 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 RAB11FIP3O75154 756 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 ITGBL1O95965 494 aaPredicted RBP9.66□□□□□ -0.86
SSR1-210ENST00000489567 CENPBP07199 599 aaPredicted RBP9.66□□□□□ -0.86
SSR1-210ENST00000489567 ARID4AP29374 1257 aaPredicted RBP9.66□□□□□ -0.86
SSR1-210ENST00000489567 MCAMP43121 646 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 FSTL1Q12841 308 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 NBPF9Q3BBW0 867 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 GORABQ5T7V8 394 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 DLK2Q6UY11 383 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 GNL3LQ9NVN8 582 aaKnown RBP9.66□□□□□ -0.86
SSR1-210ENST00000489567 HMG20BQ9P0W2 317 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 PGAP2Q9UHJ9 254 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 SCAF8Q9UPN6 1271 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms