RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 DENND2AQ9ULE3 1009 aa19.59■□□□□ 0.73
HDAC7-224ENST00000488927 VEGFAP15692 232 aaPredicted RBP19.58■□□□□ 0.72
HDAC7-224ENST00000488927 GMPSP49915 693 aaPredicted RBP19.58■□□□□ 0.72
HDAC7-224ENST00000488927 DBNDD2Q9BQY9 259 aa19.58■□□□□ 0.72
HDAC7-224ENST00000488927 PDS5AQ29RF7 1337 aaKnown RBP19.57■□□□□ 0.72
HDAC7-224ENST00000488927 WDR90Q96KV7 1748 aa19.57■□□□□ 0.72
HDAC7-224ENST00000488927 ARID4AP29374 1257 aaPredicted RBP19.57■□□□□ 0.72
HDAC7-224ENST00000488927 TTC39AQ5SRH9 613 aa19.57■□□□□ 0.72
HDAC7-224ENST00000488927 WDR66Q8TBY9 1149 aa19.57■□□□□ 0.72
HDAC7-224ENST00000488927 ZNF512BQ96KM6 892 aaPredicted RBP19.57■□□□□ 0.72
HDAC7-224ENST00000488927 CCDC8Q9H0W5 538 aaPredicted RBP19.57■□□□□ 0.72
HDAC7-224ENST00000488927 HACL1Q9UJ83 578 aa19.57■□□□□ 0.72
HDAC7-224ENST00000488927 DBNLQ9UJU6 430 aaKnown RBP19.57■□□□□ 0.72
HDAC7-224ENST00000488927 IQSEC3Q9UPP2 1182 aaPredicted RBP19.57■□□□□ 0.72
HDAC7-224ENST00000488927 SCNN1DP51172 638 aa19.56■□□□□ 0.72
HDAC7-224ENST00000488927 SMC5Q8IY18 1101 aa19.56■□□□□ 0.72
HDAC7-224ENST00000488927 GPRC5DQ9NZD1 345 aa19.56■□□□□ 0.72
HDAC7-224ENST00000488927 ZBTB12Q9Y330 459 aaPredicted RBP19.56■□□□□ 0.72
HDAC7-224ENST00000488927 SCN9AQ15858 1988 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 H7C1D1 291 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 IGHDP01880 384 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 CHAF1AQ13111 956 aaPredicted RBP19.55■□□□□ 0.72
HDAC7-224ENST00000488927 MFSD14BQ5SR56 506 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 ERICH6BQ5W0A0 696 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 OGFOD1Q8N543 542 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 GMLQ99445 158 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 RRAGCQ9HB90 399 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 PSME4Q14997 1843 aa19.55■□□□□ 0.72
HDAC7-224ENST00000488927 RASGRF1Q13972 1273 aa19.54■□□□□ 0.72
HDAC7-224ENST00000488927 PNMA8AQ86V59 439 aaPredicted RBP19.54■□□□□ 0.72
HDAC7-224ENST00000488927 ZGPATQ8N5A5 531 aaKnown RBP19.54■□□□□ 0.72
HDAC7-224ENST00000488927 NMRK2Q9NPI5 230 aa19.54■□□□□ 0.72
HDAC7-224ENST00000488927 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
HDAC7-224ENST00000488927 CNOT7Q9UIV1 285 aaKnown RBP19.54■□□□□ 0.72
HDAC7-224ENST00000488927 SUGT1Q9Y2Z0 365 aa19.54■□□□□ 0.72
HDAC7-224ENST00000488927 SALL1Q9NSC2 1324 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 POTECB2RU33 542 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 SMARCA5O60264 1052 aaPredicted RBP19.53■□□□□ 0.72
HDAC7-224ENST00000488927 USP17L8P0C7I0 530 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 ANKRD45Q5TZF3 282 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 MICALL2Q8IY33 904 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 SPATA5Q8NB90 893 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 GPATCH3Q96I76 525 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 ADARB2Q9NS39 739 aaKnown RBP19.53■□□□□ 0.72
HDAC7-224ENST00000488927 HDAC9Q9UKV0 1011 aa19.53■□□□□ 0.72
HDAC7-224ENST00000488927 EPHX2P34913 555 aa19.52■□□□□ 0.72
HDAC7-224ENST00000488927 TAF1DQ9H5J8 278 aaPredicted RBP19.52■□□□□ 0.72
HDAC7-224ENST00000488927 JAG2Q9Y219 1238 aa19.52■□□□□ 0.72
HDAC7-224ENST00000488927 SCN4AP35499 1836 aa19.52■□□□□ 0.72
HDAC7-224ENST00000488927 EPS15P42566 896 aa19.51■□□□□ 0.71
HDAC7-224ENST00000488927 ZNF280AP59817 542 aaPredicted RBP19.51■□□□□ 0.71
HDAC7-224ENST00000488927 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
HDAC7-224ENST00000488927 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
HDAC7-224ENST00000488927 CERS5Q8N5B7 392 aa19.51■□□□□ 0.71
HDAC7-224ENST00000488927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.51■□□□□ 0.71
HDAC7-224ENST00000488927 MXD3Q9BW11 206 aa19.51■□□□□ 0.71
HDAC7-224ENST00000488927 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
HDAC7-224ENST00000488927 HMG20BQ9P0W2 317 aa19.51■□□□□ 0.71
HDAC7-224ENST00000488927 MAST3O60307 1309 aa19.51■□□□□ 0.71
HDAC7-224ENST00000488927 COL1A1P02452 1464 aaPredicted RBP19.5■□□□□ 0.71
HDAC7-224ENST00000488927 IGSF3O75054 1194 aa19.5■□□□□ 0.71
HDAC7-224ENST00000488927 MCAMP43121 646 aa19.5■□□□□ 0.71
HDAC7-224ENST00000488927 SPTY2D1Q68D10 685 aaPredicted RBP19.5■□□□□ 0.71
HDAC7-224ENST00000488927 KIAA0825Q8IV33 1275 aa19.5■□□□□ 0.71
HDAC7-224ENST00000488927 NUCB1Q02818 461 aa19.49■□□□□ 0.71
HDAC7-224ENST00000488927 ECHDC1Q9NTX5 307 aa19.49■□□□□ 0.71
HDAC7-224ENST00000488927 KIF3CO14782 793 aa19.48■□□□□ 0.71
HDAC7-224ENST00000488927 LDHBP07195 334 aaKnown RBP19.48■□□□□ 0.71
HDAC7-224ENST00000488927 ATP5JP18859 108 aa19.48■□□□□ 0.71
HDAC7-224ENST00000488927 CHD1LQ86WJ1 897 aa19.48■□□□□ 0.71
HDAC7-224ENST00000488927 MRIQ9BWK5 157 aa19.48■□□□□ 0.71
HDAC7-224ENST00000488927 MYOZ2Q9NPC6 264 aa19.48■□□□□ 0.71
HDAC7-224ENST00000488927 TTF2Q9UNY4 1162 aaKnown RBP19.48■□□□□ 0.71
HDAC7-224ENST00000488927 ZNF646O15015 1829 aaPredicted RBP19.48■□□□□ 0.71
HDAC7-224ENST00000488927 TTC41PQ6P2S7 1318 aa19.48■□□□□ 0.71
HDAC7-224ENST00000488927 HDLBPQ00341 1268 aaKnown RBP19.47■□□□□ 0.71
HDAC7-224ENST00000488927 SCARF1Q14162 830 aa19.47■□□□□ 0.71
HDAC7-224ENST00000488927 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
HDAC7-224ENST00000488927 ABCF2Q9UG63 623 aa19.47■□□□□ 0.71
HDAC7-224ENST00000488927 SERPINA10Q9UK55 444 aa19.47■□□□□ 0.71
HDAC7-224ENST00000488927 F8W031 263 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-224ENST00000488927 ERC2O15083 957 aa19.46■□□□□ 0.71
HDAC7-224ENST00000488927 KIF4BQ2VIQ3 1234 aa19.46■□□□□ 0.71
HDAC7-224ENST00000488927 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-224ENST00000488927 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
HDAC7-224ENST00000488927 CENPQQ7L2Z9 268 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-224ENST00000488927 CCDC136Q96JN2 1154 aa19.46■□□□□ 0.71
HDAC7-224ENST00000488927 MYH13Q9UKX3 1938 aa19.46■□□□□ 0.71
HDAC7-224ENST00000488927 SHTN1A0MZ66 631 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 MX1P20591 662 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 TTF1Q15361 905 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-224ENST00000488927 TBC1D10BQ4KMP7 808 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-224ENST00000488927 PI16Q6UXB8 463 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 SAMD7Q7Z3H4 446 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 LDHDQ86WU2 507 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 SLF2Q8IX21 1173 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 MTMR14Q8NCE2 650 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 ZC3H15Q8WU90 426 aaKnown RBP19.45■□□□□ 0.7
HDAC7-224ENST00000488927 LNPKQ9C0E8 428 aa19.45■□□□□ 0.7
HDAC7-224ENST00000488927 SNRKQ9NRH2 765 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms