RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 POP1Q99575 1024 aaKnown RBP7.56□□□□□ -1.2
ITGB1-214ENST00000488427 ABCC9O60706 1549 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 C9orf172C9J069 976 aa7.55□□□□□ -1.2
ITGB1-214ENST00000488427 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
ITGB1-214ENST00000488427 PTPN12Q05209 780 aaKnown RBP7.55□□□□□ -1.2
ITGB1-214ENST00000488427 FOXD4L6Q3SYB3 417 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-214ENST00000488427 FOXD4L3Q6VB84 417 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-214ENST00000488427 FBXO11Q86XK2 927 aa7.55□□□□□ -1.2
ITGB1-214ENST00000488427 CCNJLQ8IV13 435 aa7.55□□□□□ -1.2
ITGB1-214ENST00000488427 FMR1NBQ8N0W7 255 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-214ENST00000488427 ZFP64Q9NPA5 681 aa7.55□□□□□ -1.2
ITGB1-214ENST00000488427 PRPF40AO75400 957 aaKnown RBP7.54□□□□□ -1.2
ITGB1-214ENST00000488427 COL9A3Q14050 684 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-214ENST00000488427 GRIK4Q16099 956 aa7.54□□□□□ -1.2
ITGB1-214ENST00000488427 HP1BP3Q5SSJ5 553 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-214ENST00000488427 ARTNQ5T4W7 220 aa7.54□□□□□ -1.2
ITGB1-214ENST00000488427 PEAR1Q5VY43 1037 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-214ENST00000488427 USPL1Q5W0Q7 1092 aa7.54□□□□□ -1.2
ITGB1-214ENST00000488427 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
ITGB1-214ENST00000488427 OSGEPQ9NPF4 335 aa7.54□□□□□ -1.2
ITGB1-214ENST00000488427 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
ITGB1-214ENST00000488427 NFKBIEO00221 500 aa7.53□□□□□ -1.2
ITGB1-214ENST00000488427 IKBKEQ14164 716 aa7.53□□□□□ -1.2
ITGB1-214ENST00000488427 PRSS36Q5K4E3 855 aa7.53□□□□□ -1.2
ITGB1-214ENST00000488427 NBPF11Q86T75 865 aa7.53□□□□□ -1.2
ITGB1-214ENST00000488427 SEC31BQ9NQW1 1179 aa7.53□□□□□ -1.2
ITGB1-214ENST00000488427 LATS2Q9NRM7 1088 aa7.53□□□□□ -1.2
ITGB1-214ENST00000488427 A0A096LPE4 126 aa7.52□□□□□ -1.21
ITGB1-214ENST00000488427 A0A1W2PPZ6 126 aa7.52□□□□□ -1.21
ITGB1-214ENST00000488427 P4HBP07237 508 aaKnown RBP7.52□□□□□ -1.21
ITGB1-214ENST00000488427 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-214ENST00000488427 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
ITGB1-214ENST00000488427 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
ITGB1-214ENST00000488427 CLEC4MQ9H2X3 399 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-214ENST00000488427 SOX17Q9H6I2 414 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-214ENST00000488427 SOX13Q9UN79 622 aa7.52□□□□□ -1.21
ITGB1-214ENST00000488427 LINC01387J3KSC0 135 aa7.51□□□□□ -1.21
ITGB1-214ENST00000488427 FSCN2O14926 492 aa7.51□□□□□ -1.21
ITGB1-214ENST00000488427 ACPPP15309 386 aa7.51□□□□□ -1.21
ITGB1-214ENST00000488427 GSTT1P30711 240 aa7.51□□□□□ -1.21
ITGB1-214ENST00000488427 C19orf57Q0VDD7 668 aa7.51□□□□□ -1.21
ITGB1-214ENST00000488427 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
ITGB1-214ENST00000488427 ZNF326Q5BKZ1 582 aaKnown RBP7.51□□□□□ -1.21
ITGB1-214ENST00000488427 DNAJC14Q6Y2X3 702 aaPredicted RBP7.51□□□□□ -1.21
ITGB1-214ENST00000488427 DTHD1Q6ZMT9 781 aa7.51□□□□□ -1.21
ITGB1-214ENST00000488427 USP21Q9UK80 565 aa7.51□□□□□ -1.21
ITGB1-214ENST00000488427 TMEM238LA0A1B0GVL6 79 aa7.5□□□□□ -1.21
ITGB1-214ENST00000488427 EPHA1P21709 976 aa7.5□□□□□ -1.21
ITGB1-214ENST00000488427 XPCQ01831 940 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-214ENST00000488427 NPAS4Q8IUM7 802 aa7.5□□□□□ -1.21
ITGB1-214ENST00000488427 EPS8L3Q8TE67 593 aaKnown RBP7.5□□□□□ -1.21
ITGB1-214ENST00000488427 LENG1Q96BZ8 264 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-214ENST00000488427 TCF12Q99081 682 aa7.5□□□□□ -1.21
ITGB1-214ENST00000488427 BCO2Q9BYV7 579 aa7.5□□□□□ -1.21
ITGB1-214ENST00000488427 SH2B1Q9NRF2 756 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-214ENST00000488427 CCDC9Q9Y3X0 531 aaKnown RBP7.5□□□□□ -1.21
ITGB1-214ENST00000488427 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 H2AFB2P0C5Z0 115 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 ITPKAP23677 461 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 GNA15P30679 374 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 CD68P34810 354 aaPredicted RBP7.49□□□□□ -1.21
ITGB1-214ENST00000488427 MFAP1P55081 439 aaKnown RBP7.49□□□□□ -1.21
ITGB1-214ENST00000488427 PPP2R3AQ06190 1150 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 GRM2Q14416 872 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 FAM8A1Q9UBU6 413 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 PPM1HQ9ULR3 514 aa7.49□□□□□ -1.21
ITGB1-214ENST00000488427 TRPA1O75762 1119 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 EIF4BP23588 611 aaKnown RBP7.48□□□□□ -1.21
ITGB1-214ENST00000488427 PCDH1Q08174 1060 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 ADGRE1Q14246 886 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 MBTPS1Q14703 1052 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 SETDB1Q15047 1291 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 ILDR2Q71H61 639 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 SLC7A3Q8WY07 619 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 CEP44Q9C0F1 390 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 MRS2Q9HD23 443 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 ABCB6Q9NP58 842 aa7.48□□□□□ -1.21
ITGB1-214ENST00000488427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-214ENST00000488427 DLL1O00548 723 aa7.47□□□□□ -1.21
ITGB1-214ENST00000488427 CYP11A1P05108 521 aa7.47□□□□□ -1.21
ITGB1-214ENST00000488427 CDC25BP30305 580 aa7.47□□□□□ -1.21
ITGB1-214ENST00000488427 TRIM26Q12899 539 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-214ENST00000488427 TXNRD3Q86VQ6 643 aa7.47□□□□□ -1.21
ITGB1-214ENST00000488427 BCL2L13Q9BXK5 485 aa7.47□□□□□ -1.21
ITGB1-214ENST00000488427 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
ITGB1-214ENST00000488427 SAMM50Q9Y512 469 aa7.47□□□□□ -1.21
ITGB1-214ENST00000488427 DEAF1O75398 565 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-214ENST00000488427 ESRRAP11474 423 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-214ENST00000488427 SELPP16109 830 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 GRIA4P48058 902 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 FCGRTP55899 365 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 PSMD2Q13200 908 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 AP3B2Q13367 1082 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 LRP8Q14114 963 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 DUOXA2Q1HG44 320 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 TXNDC11Q6PKC3 985 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 VN1R5Q7Z5H4 357 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 CEP41Q9BYV8 373 aa7.46□□□□□ -1.22
ITGB1-214ENST00000488427 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms