RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
RER1-207ENST00000488353 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.24
RER1-207ENST00000488353 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
RER1-207ENST00000488353 DHX40Q8IX18 779 aaKnown RBP16.52■□□□□ 0.24
RER1-207ENST00000488353 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
RER1-207ENST00000488353 PPP1R13BQ96KQ4 1090 aa16.52■□□□□ 0.24
RER1-207ENST00000488353 COL15A1P39059 1388 aa16.52■□□□□ 0.23
RER1-207ENST00000488353 ATP8B1O43520 1251 aa16.52■□□□□ 0.23
RER1-207ENST00000488353 KCNJ6P48051 423 aa16.52■□□□□ 0.23
RER1-207ENST00000488353 TNNI3KQ59H18 835 aa16.52■□□□□ 0.23
RER1-207ENST00000488353 UBXN4Q92575 508 aa16.52■□□□□ 0.23
RER1-207ENST00000488353 ZBTB3Q9H5J0 574 aa16.52■□□□□ 0.23
RER1-207ENST00000488353 FPGT-TNNI3KV9GXZ4 949 aa16.52■□□□□ 0.23
RER1-207ENST00000488353 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 GPS2Q13227 327 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 DHX8Q14562 1220 aaKnown RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 DBNDD2Q9BQY9 259 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 NAT10Q9H0A0 1025 aaKnown RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 ZSCAN16Q9H4T2 348 aaPredicted RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 AFDNP55196 1824 aaKnown RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 SHANK3Q9BYB0 1731 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 NRDCO43847 1150 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 FOSBP53539 338 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 Q6ZUG5 572 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
RER1-207ENST00000488353 CCDC150Q8NCX0 1101 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 NEK1Q96PY6 1258 aa16.51■□□□□ 0.23
RER1-207ENST00000488353 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 ATP5JP18859 108 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 HMG20BQ9P0W2 317 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 LAMB4A4D0S4 1761 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
RER1-207ENST00000488353 RESTQ13127 1097 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 LRRN4CLQ8ND94 238 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
RER1-207ENST00000488353 ORC3Q9UBD5 711 aaPredicted RBP16.5■□□□□ 0.23
RER1-207ENST00000488353 POLR3GO15318 223 aaPredicted RBP16.49■□□□□ 0.23
RER1-207ENST00000488353 TPM1P09493 284 aa16.49■□□□□ 0.23
RER1-207ENST00000488353 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
RER1-207ENST00000488353 NEK11Q8NG66 645 aa16.49■□□□□ 0.23
RER1-207ENST00000488353 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
RER1-207ENST00000488353 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
RER1-207ENST00000488353 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
RER1-207ENST00000488353 NBPF11Q86T75 865 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 CCAR1Q8IX12 1150 aaKnown RBP16.48■□□□□ 0.23
RER1-207ENST00000488353 BRF1Q92994 677 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 H3BQV1 296 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
RER1-207ENST00000488353 CYP21A2P08686 494 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 CASP7P55210 303 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 TSGA10IPQ3SY00 556 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 RASSF4Q9H2L5 321 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 ZNF609O15014 1411 aa16.48■□□□□ 0.23
RER1-207ENST00000488353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
RER1-207ENST00000488353 CCP110O43303 1012 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.23
RER1-207ENST00000488353 ETF1P62495 437 aaKnown RBP16.47■□□□□ 0.23
RER1-207ENST00000488353 USPL1Q5W0Q7 1092 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 LMBR1LQ6UX01 489 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 KRBA2Q6ZNG9 492 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 UBXN6Q9BZV1 441 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 TAF7LQ5H9L4 462 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 AOPEPQ8N6M6 819 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 PHLPP2Q6ZVD8 1323 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
RER1-207ENST00000488353 KRT32Q14532 448 aa16.46■□□□□ 0.23
RER1-207ENST00000488353 RABL6Q3YEC7 729 aaPredicted RBP16.46■□□□□ 0.23
RER1-207ENST00000488353 MNS1Q8NEH6 495 aa16.46■□□□□ 0.23
RER1-207ENST00000488353 PIGBQ92521 554 aa16.46■□□□□ 0.23
RER1-207ENST00000488353 RCOR1Q9UKL0 485 aa16.46■□□□□ 0.23
RER1-207ENST00000488353 TOGARAM1Q9Y4F4 1720 aa16.46■□□□□ 0.23
RER1-207ENST00000488353 JCADQ9P266 1359 aa16.46■□□□□ 0.23
RER1-207ENST00000488353 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
RER1-207ENST00000488353 CWC15Q9P013 229 aaKnown RBP16.46■□□□□ 0.23
RER1-207ENST00000488353 EFCAB8A8MWE9 144 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 ARMCX5Q6P1M9 558 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 SMARCE1Q969G3 411 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 SYTL4Q96C24 671 aaPredicted RBP16.45■□□□□ 0.22
RER1-207ENST00000488353 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
RER1-207ENST00000488353 TNS2Q63HR2 1409 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
RER1-207ENST00000488353 ST5P78524 1137 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
RER1-207ENST00000488353 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
RER1-207ENST00000488353 FOXO4P98177 505 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms