RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 EYSQ5T1H1 3165 aa12.7□□□□□ -0.38
PTPN7-213ENST00000486116 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
PTPN7-213ENST00000486116 GNRH1P01148 92 aa12.7□□□□□ -0.38
PTPN7-213ENST00000486116 BMP8BP34820 402 aa12.7□□□□□ -0.38
PTPN7-213ENST00000486116 KIF22Q14807 665 aa12.7□□□□□ -0.38
PTPN7-213ENST00000486116 PLBD2Q8NHP8 589 aa12.7□□□□□ -0.38
PTPN7-213ENST00000486116 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
PTPN7-213ENST00000486116 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 AOX1Q06278 1338 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 TLR2O60603 784 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 GRK4P32298 578 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 BCAMP50895 628 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 TXNRD3Q86VQ6 643 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 U2AF1L4Q8WU68 220 aaKnown RBP12.69□□□□□ -0.38
PTPN7-213ENST00000486116 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-213ENST00000486116 RNF208Q9H0X6 261 aa12.69□□□□□ -0.38
PTPN7-213ENST00000486116 TTC28Q96AY4 2481 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 CLRN2A0PK11 232 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 DLGAP5Q15398 846 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-213ENST00000486116 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 TRIM47Q96LD4 638 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 COA1Q9GZY4 146 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 SRRDQ9UH36 339 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 RIPOR2Q9Y4F9 1068 aa12.68□□□□□ -0.38
PTPN7-213ENST00000486116 OSBPP22059 807 aa12.67□□□□□ -0.38
PTPN7-213ENST00000486116 GTF2A2P52657 109 aa12.67□□□□□ -0.38
PTPN7-213ENST00000486116 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
PTPN7-213ENST00000486116 NFE2L2Q16236 605 aa12.67□□□□□ -0.38
PTPN7-213ENST00000486116 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
PTPN7-213ENST00000486116 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
PTPN7-213ENST00000486116 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
PTPN7-213ENST00000486116 RPTORQ8N122 1335 aa12.66□□□□□ -0.38
PTPN7-213ENST00000486116 SGPL1O95470 568 aa12.66□□□□□ -0.38
PTPN7-213ENST00000486116 KLRK1P26718 216 aa12.66□□□□□ -0.38
PTPN7-213ENST00000486116 CCT4P50991 539 aaKnown RBP12.66□□□□□ -0.38
PTPN7-213ENST00000486116 CERS5Q8N5B7 392 aa12.66□□□□□ -0.38
PTPN7-213ENST00000486116 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-213ENST00000486116 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
PTPN7-213ENST00000486116 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
PTPN7-213ENST00000486116 UNC93B1Q9H1C4 597 aa12.66□□□□□ -0.38
PTPN7-213ENST00000486116 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
PTPN7-213ENST00000486116 MYPNQ86TC9 1320 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 COL9A1P20849 921 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 PSMC4P43686 418 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 GTF2IP78347 998 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 VGLL4Q14135 290 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 RASA3Q14644 834 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 GUCD1Q96NT3 240 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 MINPP1Q9UNW1 487 aa12.65□□□□□ -0.38
PTPN7-213ENST00000486116 MUC3AQ02505 3323 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 BTBD19C9JJ37 291 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 PPP2R1AP30153 589 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 UBXN2AP68543 259 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 CFAP100Q494V2 611 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 C17orf99Q6UX52 265 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 TDHQ8IZJ6 230 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 PRMT6Q96LA8 375 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-213ENST00000486116 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
PTPN7-213ENST00000486116 ZMYND8Q9ULU4 1186 aaPredicted RBP12.64□□□□□ -0.39
PTPN7-213ENST00000486116 PRUNE2Q8WUY3 3088 aa12.64□□□□□ -0.39
PTPN7-213ENST00000486116 PDE8AO60658 829 aa12.63□□□□□ -0.39
PTPN7-213ENST00000486116 WDHD1O75717 1129 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-213ENST00000486116 C7orf61Q8IZ16 206 aa12.63□□□□□ -0.39
PTPN7-213ENST00000486116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTPN7-213ENST00000486116 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-213ENST00000486116 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-213ENST00000486116 RAPGEFL1Q9UHV5 662 aa12.63□□□□□ -0.39
PTPN7-213ENST00000486116 CPA4Q9UI42 421 aa12.63□□□□□ -0.39
PTPN7-213ENST00000486116 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
PTPN7-213ENST00000486116 COL2A1P02458 1487 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-213ENST00000486116 MYO1BO43795 1136 aa12.62□□□□□ -0.39
PTPN7-213ENST00000486116 NEFMP07197 916 aa12.62□□□□□ -0.39
PTPN7-213ENST00000486116 PRKCZQ05513 592 aa12.62□□□□□ -0.39
PTPN7-213ENST00000486116 DIS3LQ8TF46 1054 aaKnown RBP12.62□□□□□ -0.39
PTPN7-213ENST00000486116 PAWRQ96IZ0 340 aaKnown RBP12.62□□□□□ -0.39
PTPN7-213ENST00000486116 TEPSINQ96N21 525 aa12.62□□□□□ -0.39
PTPN7-213ENST00000486116 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-213ENST00000486116 DOCK3Q8IZD9 2030 aa12.62□□□□□ -0.39
PTPN7-213ENST00000486116 LAMA2P24043 3122 aaKnown RBP12.61□□□□□ -0.39
PTPN7-213ENST00000486116 SPDYE5A6NIY4 337 aa12.61□□□□□ -0.39
PTPN7-213ENST00000486116 F8W031 263 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-213ENST00000486116 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-213ENST00000486116 PCCAP05165 728 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-213ENST00000486116 CETPP11597 493 aa12.61□□□□□ -0.39
PTPN7-213ENST00000486116 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
PTPN7-213ENST00000486116 HOXD10P28358 340 aa12.61□□□□□ -0.39
PTPN7-213ENST00000486116 MAGEA10P43363 369 aaPredicted RBP12.61□□□□□ -0.39
PTPN7-213ENST00000486116 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
PTPN7-213ENST00000486116 BABAM1Q9NWV8 329 aa12.61□□□□□ -0.39
PTPN7-213ENST00000486116 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
PTPN7-213ENST00000486116 TFRCP02786 760 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms