RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 GYG1P46976 350 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 WASHC4Q2M389 1173 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 CAVIN4Q5BKX8 364 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 INTS4Q96HW7 963 aaKnown RBP16.79■□□□□ 0.28
CLK3-204ENST00000483723 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 ANKRD31Q8N7Z5 1873 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 SEMA3EO15041 775 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 AK2P54819 239 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
CLK3-204ENST00000483723 RBM17Q96I25 401 aaKnown RBP16.79■□□□□ 0.28
CLK3-204ENST00000483723 CRAMP1Q96RY5 1269 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 PDRG1Q9NUG6 133 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 LEMD3Q9Y2U8 911 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 PDS5AQ29RF7 1337 aaKnown RBP16.79■□□□□ 0.28
CLK3-204ENST00000483723 EP400Q96L91 3159 aa16.78■□□□□ 0.28
CLK3-204ENST00000483723 IDH1O75874 414 aaKnown RBP16.78■□□□□ 0.28
CLK3-204ENST00000483723 BBOX1O75936 387 aa16.78■□□□□ 0.28
CLK3-204ENST00000483723 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
CLK3-204ENST00000483723 C15orf52Q6ZUT6 534 aaKnown RBP16.78■□□□□ 0.28
CLK3-204ENST00000483723 DENND2AQ9ULE3 1009 aa16.78■□□□□ 0.28
CLK3-204ENST00000483723 ZNF532Q9HCE3 1301 aa16.78■□□□□ 0.28
CLK3-204ENST00000483723 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
CLK3-204ENST00000483723 GPAA1O43292 621 aa16.77■□□□□ 0.28
CLK3-204ENST00000483723 CPA1P15085 419 aa16.77■□□□□ 0.28
CLK3-204ENST00000483723 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
CLK3-204ENST00000483723 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
CLK3-204ENST00000483723 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.28
CLK3-204ENST00000483723 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
CLK3-204ENST00000483723 BLOC1S2Q6QNY1 142 aa16.76■□□□□ 0.27
CLK3-204ENST00000483723 CTNNA3Q9UI47 895 aa16.76■□□□□ 0.27
CLK3-204ENST00000483723 COL1A1P02452 1464 aaPredicted RBP16.76■□□□□ 0.27
CLK3-204ENST00000483723 HIBADHP31937 336 aaKnown RBP16.76■□□□□ 0.27
CLK3-204ENST00000483723 RAB3GAP1Q15042 981 aa16.76■□□□□ 0.27
CLK3-204ENST00000483723 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
CLK3-204ENST00000483723 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
CLK3-204ENST00000483723 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
CLK3-204ENST00000483723 XDHP47989 1333 aa16.75■□□□□ 0.27
CLK3-204ENST00000483723 KLRK1P26718 216 aa16.75■□□□□ 0.27
CLK3-204ENST00000483723 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
CLK3-204ENST00000483723 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
CLK3-204ENST00000483723 NBR1Q14596 966 aa16.75■□□□□ 0.27
CLK3-204ENST00000483723 SLC15A2Q16348 729 aa16.75■□□□□ 0.27
CLK3-204ENST00000483723 ZGPATQ8N5A5 531 aaKnown RBP16.75■□□□□ 0.27
CLK3-204ENST00000483723 ZSCAN31Q96LW9 406 aaPredicted RBP16.75■□□□□ 0.27
CLK3-204ENST00000483723 STRBPQ96SI9 672 aaKnown RBP16.75■□□□□ 0.27
CLK3-204ENST00000483723 FGAP02671 866 aa16.74■□□□□ 0.27
CLK3-204ENST00000483723 ALX1Q15699 326 aa16.74■□□□□ 0.27
CLK3-204ENST00000483723 STOX1Q6ZVD7 989 aa16.74■□□□□ 0.27
CLK3-204ENST00000483723 TMC4Q7Z404 712 aa16.74■□□□□ 0.27
CLK3-204ENST00000483723 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
CLK3-204ENST00000483723 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
CLK3-204ENST00000483723 TXNRD3Q86VQ6 643 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 VPS37DQ86XT2 251 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 LRRC37AA6NMS7 1700 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 MYH13Q9UKX3 1938 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 IGSF3O75054 1194 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 MMP10P09238 476 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 HMGB1P09429 215 aaKnown RBP16.73■□□□□ 0.27
CLK3-204ENST00000483723 NUCB2P80303 420 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 ANKRD1Q15327 319 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
CLK3-204ENST00000483723 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
CLK3-204ENST00000483723 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
CLK3-204ENST00000483723 A0A0G2JLW4 131 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 SRGNP10124 158 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 GPSM2P81274 684 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 TTLL5Q6EMB2 1281 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 TMED8Q6PL24 325 aaPredicted RBP16.72■□□□□ 0.27
CLK3-204ENST00000483723 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
CLK3-204ENST00000483723 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
CLK3-204ENST00000483723 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 LRP2BPQ9P2M1 347 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 CACNA1SQ13698 1873 aa16.72■□□□□ 0.27
CLK3-204ENST00000483723 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
CLK3-204ENST00000483723 PATL2C9JE40 543 aaKnown RBP16.71■□□□□ 0.27
CLK3-204ENST00000483723 E7EWF7 191 aa16.71■□□□□ 0.27
CLK3-204ENST00000483723 EXOSC10Q01780 885 aaKnown RBP16.71■□□□□ 0.27
CLK3-204ENST00000483723 TOB2Q14106 344 aaPredicted RBP16.71■□□□□ 0.27
CLK3-204ENST00000483723 CLEC17AQ6ZS10 378 aa16.71■□□□□ 0.27
CLK3-204ENST00000483723 DHX32Q7L7V1 743 aaKnown RBP16.71■□□□□ 0.27
CLK3-204ENST00000483723 TDRD7Q8NHU6 1098 aaKnown RBP16.71■□□□□ 0.27
CLK3-204ENST00000483723 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
CLK3-204ENST00000483723 LTBP1Q14766 1721 aa16.71■□□□□ 0.26
CLK3-204ENST00000483723 NPR1P16066 1061 aa16.7■□□□□ 0.26
CLK3-204ENST00000483723 PDE6BP35913 854 aa16.7■□□□□ 0.26
CLK3-204ENST00000483723 IMMTQ16891 758 aaKnown RBP16.7■□□□□ 0.26
CLK3-204ENST00000483723 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
CLK3-204ENST00000483723 TNPO1Q92973 898 aaKnown RBP16.7■□□□□ 0.26
CLK3-204ENST00000483723 AIDAQ96BJ3 306 aa16.7■□□□□ 0.26
CLK3-204ENST00000483723 AGXT2Q9BYV1 514 aa16.7■□□□□ 0.26
CLK3-204ENST00000483723 FBXL16Q8N461 479 aa16.7■□□□□ 0.26
CLK3-204ENST00000483723 TPCN1Q9ULQ1 816 aa16.7■□□□□ 0.26
CLK3-204ENST00000483723 SALL1Q9NSC2 1324 aa16.69■□□□□ 0.26
CLK3-204ENST00000483723 LARGE1O95461 756 aa16.69■□□□□ 0.26
CLK3-204ENST00000483723 GNAT2P19087 354 aa16.69■□□□□ 0.26
CLK3-204ENST00000483723 SF3B2Q13435 895 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms