RNA–Protein interactions for RNA: ENST00000480475.5

SUN1-231, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 680 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-231	ENST00000480475		F8W031	263 aa	Predicted RBP	21.48	■■□□□ 1.03
SUN1-231	ENST00000480475	CAPN15	O75808	1086 aa		21.48	■■□□□ 1.03
SUN1-231	ENST00000480475	RARS	P54136	660 aa	Known RBP	21.48	■■□□□ 1.03
SUN1-231	ENST00000480475	FAM84B	Q96KN1	310 aa	Predicted RBP	21.48	■■□□□ 1.03
SUN1-231	ENST00000480475	ECM29	Q5VYK3	1845 aa		21.48	■■□□□ 1.03
SUN1-231	ENST00000480475	BRPF1	P55201	1214 aa	Predicted RBP	21.47	■■□□□ 1.03
SUN1-231	ENST00000480475	TDRD7	Q8NHU6	1098 aa	Known RBP	21.47	■■□□□ 1.03
SUN1-231	ENST00000480475	HDAC9	Q9UKV0	1011 aa		21.47	■■□□□ 1.03
SUN1-231	ENST00000480475	MROH5	Q6ZUA9	1318 aa		21.47	■■□□□ 1.03
SUN1-231	ENST00000480475	CASP8AP2	Q9UKL3	1982 aa		21.47	■■□□□ 1.03
SUN1-231	ENST00000480475	PAPPA2	Q9BXP8	1791 aa		21.46	■■□□□ 1.03
SUN1-231	ENST00000480475	RFX5	P48382	616 aa	Predicted RBP	21.46	■■□□□ 1.03
SUN1-231	ENST00000480475	MMP14	P50281	582 aa		21.46	■■□□□ 1.03
SUN1-231	ENST00000480475	ZNF157	P51786	506 aa	Predicted RBP	21.46	■■□□□ 1.03
SUN1-231	ENST00000480475	VGLL2	Q8N8G2	317 aa		21.46	■■□□□ 1.03
SUN1-231	ENST00000480475	BEGAIN	Q9BUH8	593 aa		21.46	■■□□□ 1.03
SUN1-231	ENST00000480475	AOX1	Q06278	1338 aa		21.46	■■□□□ 1.03
SUN1-231	ENST00000480475	HIBADH	P31937	336 aa	Known RBP	21.45	■■□□□ 1.02
SUN1-231	ENST00000480475	NOG	Q13253	232 aa		21.45	■■□□□ 1.02
SUN1-231	ENST00000480475	METTL24	Q5JXM2	366 aa		21.45	■■□□□ 1.02
SUN1-231	ENST00000480475	FAM205A	Q6ZU69	1335 aa		21.45	■■□□□ 1.02
SUN1-231	ENST00000480475	FKBP1A	P62942	108 aa	Known RBP	21.44	■■□□□ 1.02
SUN1-231	ENST00000480475	DLGAP5	Q15398	846 aa		21.44	■■□□□ 1.02
SUN1-231	ENST00000480475	FBXO33	Q7Z6M2	555 aa		21.44	■■□□□ 1.02
SUN1-231	ENST00000480475	UBE2Q2L	H0YL09	131 aa		21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	PDE8B	O95263	885 aa		21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	KIF23	Q02241	960 aa	Predicted RBP	21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	CFAP100	Q494V2	611 aa		21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	DIEXF	Q68CQ4	756 aa	Known RBP	21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	CCDC102A	Q96A19	550 aa		21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	PRMT6	Q96LA8	375 aa	Predicted RBP	21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	API5	Q9BZZ5	524 aa	Known RBP	21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	AKAP11	Q9UKA4	1901 aa		21.43	■■□□□ 1.02
SUN1-231	ENST00000480475	SLC10A3	P09131	477 aa		21.42	■■□□□ 1.02
SUN1-231	ENST00000480475	PTPN12	Q05209	780 aa	Known RBP	21.42	■■□□□ 1.02
SUN1-231	ENST00000480475	GRIK5	Q16478	980 aa		21.42	■■□□□ 1.02
SUN1-231	ENST00000480475	MTMR14	Q8NCE2	650 aa		21.42	■■□□□ 1.02
SUN1-231	ENST00000480475	ARAP2	Q8WZ64	1704 aa		21.42	■■□□□ 1.02
SUN1-231	ENST00000480475	UBTFL1	P0CB47	393 aa	Predicted RBP	21.41	■■□□□ 1.02
SUN1-231	ENST00000480475	FKBP1B	P68106	108 aa		21.41	■■□□□ 1.02
SUN1-231	ENST00000480475	MFSD14B	Q5SR56	506 aa		21.41	■■□□□ 1.02
SUN1-231	ENST00000480475	RASAL3	Q86YV0	1011 aa		21.41	■■□□□ 1.02
SUN1-231	ENST00000480475	TNN	Q9UQP3	1299 aa		21.41	■■□□□ 1.02
SUN1-231	ENST00000480475	CLRN2	A0PK11	232 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	SPDYE2B	A6NHP3	402 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	EYA2	O00167	538 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	SPDYE6	P0CI01	402 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	BCAM	P50895	628 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	ATG9A	Q7Z3C6	839 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	APOBEC3F	Q8IUX4	373 aa	Known RBP	21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	MEIS3	Q99687	375 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	FZD1	Q9UP38	647 aa		21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	LRRFIP2	Q9Y608	721 aa	Known RBP	21.4	■■□□□ 1.02
SUN1-231	ENST00000480475	BCAR3	O75815	825 aa		21.39	■■□□□ 1.01
SUN1-231	ENST00000480475	FGFR2	P21802	821 aa		21.39	■■□□□ 1.01
SUN1-231	ENST00000480475	PRKG1	Q13976	671 aa		21.39	■■□□□ 1.01
SUN1-231	ENST00000480475	TTLL12	Q14166	644 aa	Predicted RBP	21.39	■■□□□ 1.01
SUN1-231	ENST00000480475	DEFB129	Q9H1M3	183 aa		21.39	■■□□□ 1.01
SUN1-231	ENST00000480475	MYH13	Q9UKX3	1938 aa		21.38	■■□□□ 1.01
SUN1-231	ENST00000480475	RBM5	P52756	815 aa	Known RBP eCLIP	21.38	■■□□□ 1.01
SUN1-231	ENST00000480475	CHAF1A	Q13111	956 aa	Predicted RBP	21.38	■■□□□ 1.01
SUN1-231	ENST00000480475	VPS37D	Q86XT2	251 aa		21.38	■■□□□ 1.01
SUN1-231	ENST00000480475	CSRNP1	Q96S65	589 aa		21.38	■■□□□ 1.01
SUN1-231	ENST00000480475	SIL1	Q9H173	461 aa		21.38	■■□□□ 1.01
SUN1-231	ENST00000480475	TTF2	Q9UNY4	1162 aa	Known RBP	21.38	■■□□□ 1.01
SUN1-231	ENST00000480475	CA12	O43570	354 aa		21.37	■■□□□ 1.01
SUN1-231	ENST00000480475	INTS3	Q68E01	1043 aa	Known RBP	21.37	■■□□□ 1.01
SUN1-231	ENST00000480475	ARHGAP45	Q92619	1136 aa		21.37	■■□□□ 1.01
SUN1-231	ENST00000480475	HNRNPU	Q00839	825 aa	Known RBP eCLIP	21.36	■■□□□ 1.01
SUN1-231	ENST00000480475	PUM3	Q15397	648 aa	Known RBP	21.36	■■□□□ 1.01
SUN1-231	ENST00000480475	CAVIN4	Q5BKX8	364 aa		21.36	■■□□□ 1.01
SUN1-231	ENST00000480475	VEZT	Q9HBM0	779 aa		21.36	■■□□□ 1.01
SUN1-231	ENST00000480475	PA2G4	Q9UQ80	394 aa	Known RBP	21.36	■■□□□ 1.01
SUN1-231	ENST00000480475	SSC5D	A1L4H1	1573 aa		21.36	■■□□□ 1.01
SUN1-231	ENST00000480475	KIF16B	Q96L93	1317 aa		21.35	■■□□□ 1.01
SUN1-231	ENST00000480475	NF2	P35240	595 aa		21.35	■■□□□ 1.01
SUN1-231	ENST00000480475	RNF186	Q9NXI6	227 aa		21.35	■■□□□ 1.01
SUN1-231	ENST00000480475	IFIT1	P09914	478 aa	Known RBP	21.34	■■□□□ 1.01
SUN1-231	ENST00000480475	TRIM27	P14373	513 aa		21.34	■■□□□ 1.01
SUN1-231	ENST00000480475	TDRD3	Q9H7E2	651 aa	Known RBP	21.34	■■□□□ 1.01
SUN1-231	ENST00000480475	SERPINA10	Q9UK55	444 aa		21.34	■■□□□ 1.01
SUN1-231	ENST00000480475	COL1A1	P02452	1464 aa	Predicted RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	MYO1B	O43795	1136 aa		21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	FRAT2	O75474	233 aa	Predicted RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	TRPA1	O75762	1119 aa		21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	CRK	P46108	304 aa		21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	MKRN3	Q13064	507 aa	Known RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	NBPF12	Q5TAG4	269 aa	Predicted RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	DZIP1L	Q8IYY4	767 aa	Known RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	FRAT1	Q92837	279 aa	Predicted RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	ZNF70	Q9UC06	446 aa	Predicted RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	ANGEL1	Q9UNK9	670 aa	Known RBP	21.33	■■□□□ 1.01
SUN1-231	ENST00000480475	CIAO1	O76071	339 aa		21.32	■■□□□ 1
SUN1-231	ENST00000480475	RASA3	Q14644	834 aa		21.32	■■□□□ 1
SUN1-231	ENST00000480475	SPDYE2	Q495Y8	402 aa		21.32	■■□□□ 1
SUN1-231	ENST00000480475	LDLRAD1	Q5T700	205 aa		21.32	■■□□□ 1
SUN1-231	ENST00000480475	ARMC9	Q7Z3E5	817 aa		21.32	■■□□□ 1
SUN1-231	ENST00000480475	LPIN2	Q92539	896 aa		21.32	■■□□□ 1
SUN1-231	ENST00000480475	CLUAP1	Q96AJ1	413 aa		21.32	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms