RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 MAP2K2P36507 400 aa19.16■□□□□ 0.66
CDK9-203ENST00000480353 GYG1P46976 350 aa19.16■□□□□ 0.66
CDK9-203ENST00000480353 RBM5P52756 815 aaKnown RBP eCLIP19.16■□□□□ 0.66
CDK9-203ENST00000480353 LRRC24Q50LG9 513 aa19.16■□□□□ 0.66
CDK9-203ENST00000480353 TNS4Q8IZW8 715 aa19.16■□□□□ 0.66
CDK9-203ENST00000480353 KLHDC4Q8TBB5 520 aa19.16■□□□□ 0.66
CDK9-203ENST00000480353 WBP1LQ9NX94 342 aa19.16■□□□□ 0.66
CDK9-203ENST00000480353 AOC2O75106 756 aa19.15■□□□□ 0.66
CDK9-203ENST00000480353 TTLL12Q14166 644 aaPredicted RBP19.15■□□□□ 0.66
CDK9-203ENST00000480353 APOBEC3FQ8IUX4 373 aaKnown RBP19.15■□□□□ 0.66
CDK9-203ENST00000480353 ARHGAP45Q92619 1136 aa19.15■□□□□ 0.66
CDK9-203ENST00000480353 IRS2Q9Y4H2 1338 aa19.15■□□□□ 0.66
CDK9-203ENST00000480353 PCNTO95613 3336 aa19.15■□□□□ 0.66
CDK9-203ENST00000480353 PDE8BO95263 885 aa19.14■□□□□ 0.65
CDK9-203ENST00000480353 IFIT1P09914 478 aaKnown RBP19.14■□□□□ 0.65
CDK9-203ENST00000480353 ZNF157P51786 506 aaPredicted RBP19.14■□□□□ 0.65
CDK9-203ENST00000480353 FKBP1AP62942 108 aaKnown RBP19.14■□□□□ 0.65
CDK9-203ENST00000480353 RGMBQ6NW40 437 aa19.14■□□□□ 0.65
CDK9-203ENST00000480353 SCAF8Q9UPN6 1271 aaKnown RBP19.14■□□□□ 0.65
CDK9-203ENST00000480353 GNAI3P08754 354 aa19.13■□□□□ 0.65
CDK9-203ENST00000480353 NOGQ13253 232 aa19.13■□□□□ 0.65
CDK9-203ENST00000480353 PUM3Q15397 648 aaKnown RBP19.13■□□□□ 0.65
CDK9-203ENST00000480353 MFSD14BQ5SR56 506 aa19.13■□□□□ 0.65
CDK9-203ENST00000480353 CCDC102AQ96A19 550 aa19.13■□□□□ 0.65
CDK9-203ENST00000480353 LRRFIP2Q9Y608 721 aaKnown RBP19.13■□□□□ 0.65
CDK9-203ENST00000480353 ECM29Q5VYK3 1845 aa19.13■□□□□ 0.65
CDK9-203ENST00000480353 THSD7BQ9C0I4 1608 aa19.12■□□□□ 0.65
CDK9-203ENST00000480353 EYA2O00167 538 aa19.12■□□□□ 0.65
CDK9-203ENST00000480353 SLC5A1P13866 664 aa19.12■□□□□ 0.65
CDK9-203ENST00000480353 CHAF1AQ13111 956 aaPredicted RBP19.12■□□□□ 0.65
CDK9-203ENST00000480353 CFAP100Q494V2 611 aa19.12■□□□□ 0.65
CDK9-203ENST00000480353 FAM84BQ96KN1 310 aaPredicted RBP19.12■□□□□ 0.65
CDK9-203ENST00000480353 SIL1Q9H173 461 aa19.12■□□□□ 0.65
CDK9-203ENST00000480353 IQSEC3Q9UPP2 1182 aaPredicted RBP19.12■□□□□ 0.65
CDK9-203ENST00000480353 MYH13Q9UKX3 1938 aa19.12■□□□□ 0.65
CDK9-203ENST00000480353 LBX1P52954 281 aa19.11■□□□□ 0.65
CDK9-203ENST00000480353 FKBP1BP68106 108 aa19.11■□□□□ 0.65
CDK9-203ENST00000480353 CERS5Q8N5B7 392 aa19.11■□□□□ 0.65
CDK9-203ENST00000480353 TDRD7Q8NHU6 1098 aaKnown RBP19.11■□□□□ 0.65
CDK9-203ENST00000480353 PAPPA2Q9BXP8 1791 aa19.11■□□□□ 0.65
CDK9-203ENST00000480353 FAM205AQ6ZU69 1335 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 BCAR3O75815 825 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 PRAMEF18Q5VWM3 479 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
CDK9-203ENST00000480353 ATF7IPQ6VMQ6 1270 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 CLUAP1Q96AJ1 413 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 MEIS3Q99687 375 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 VEZTQ9HBM0 779 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 PRDM10Q9NQV6 1147 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 CEP126Q9P2H0 1117 aa19.1■□□□□ 0.65
CDK9-203ENST00000480353 TTF2Q9UNY4 1162 aaKnown RBP19.1■□□□□ 0.65
CDK9-203ENST00000480353 ARAP2Q8WZ64 1704 aa19.09■□□□□ 0.65
CDK9-203ENST00000480353 CA12O43570 354 aa19.09■□□□□ 0.65
CDK9-203ENST00000480353 PTPN12Q05209 780 aaKnown RBP19.09■□□□□ 0.65
CDK9-203ENST00000480353 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
CDK9-203ENST00000480353 TBC1D22AQ8WUA7 517 aa19.09■□□□□ 0.65
CDK9-203ENST00000480353 FBXO3Q9UK99 471 aa19.09■□□□□ 0.65
CDK9-203ENST00000480353 TRIM27P14373 513 aa19.08■□□□□ 0.64
CDK9-203ENST00000480353 RFX5P48382 616 aaPredicted RBP19.08■□□□□ 0.64
CDK9-203ENST00000480353 ARMC9Q7Z3E5 817 aa19.08■□□□□ 0.64
CDK9-203ENST00000480353 FBXO33Q7Z6M2 555 aa19.08■□□□□ 0.64
CDK9-203ENST00000480353 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.64
CDK9-203ENST00000480353 VGLL2Q8N8G2 317 aa19.08■□□□□ 0.64
CDK9-203ENST00000480353 MTMR14Q8NCE2 650 aa19.08■□□□□ 0.64
CDK9-203ENST00000480353 LPIN2Q92539 896 aa19.08■□□□□ 0.64
CDK9-203ENST00000480353 CLRN2A0PK11 232 aa19.07■□□□□ 0.64
CDK9-203ENST00000480353 CIAO1O76071 339 aa19.07■□□□□ 0.64
CDK9-203ENST00000480353 HSPA8P11142 646 aaKnown RBP19.07■□□□□ 0.64
CDK9-203ENST00000480353 BCAMP50895 628 aa19.07■□□□□ 0.64
CDK9-203ENST00000480353 PRKG1Q13976 671 aa19.07■□□□□ 0.64
CDK9-203ENST00000480353 GNL3LQ9NVN8 582 aaKnown RBP19.07■□□□□ 0.64
CDK9-203ENST00000480353 COL1A1P02452 1464 aaPredicted RBP19.07■□□□□ 0.64
CDK9-203ENST00000480353 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 AKAP11Q9UKA4 1901 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 SPDYE2BA6NHP3 402 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 SRGAP3O43295 1099 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 SPDYE6P0CI01 402 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 IL15P40933 162 aaPredicted RBP19.06■□□□□ 0.64
CDK9-203ENST00000480353 ATP2B3Q16720 1220 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 DEFB129Q9H1M3 183 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 SERPINA10Q9UK55 444 aa19.06■□□□□ 0.64
CDK9-203ENST00000480353 UBE2Q2LH0YL09 131 aa19.05■□□□□ 0.64
CDK9-203ENST00000480353 CAPN15O75808 1086 aa19.05■□□□□ 0.64
CDK9-203ENST00000480353 GNAI2P04899 355 aa19.05■□□□□ 0.64
CDK9-203ENST00000480353 TNFAIP1Q13829 316 aa19.05■□□□□ 0.64
CDK9-203ENST00000480353 ZBED3Q96IU2 234 aaPredicted RBP19.05■□□□□ 0.64
CDK9-203ENST00000480353 PRMT6Q96LA8 375 aaPredicted RBP19.05■□□□□ 0.64
CDK9-203ENST00000480353 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.05■□□□□ 0.64
CDK9-203ENST00000480353 PPP2R3BQ9Y5P8 575 aa19.05■□□□□ 0.64
CDK9-203ENST00000480353 MAST3O60307 1309 aa19.04■□□□□ 0.64
CDK9-203ENST00000480353 SLC10A3P09131 477 aa19.04■□□□□ 0.64
CDK9-203ENST00000480353 KIF23Q02241 960 aaPredicted RBP19.04■□□□□ 0.64
CDK9-203ENST00000480353 SUPT20HL1Q3ZLR7 823 aa19.04■□□□□ 0.64
CDK9-203ENST00000480353 MOB2Q70IA6 237 aa19.04■□□□□ 0.64
CDK9-203ENST00000480353 ATG9AQ7Z3C6 839 aa19.04■□□□□ 0.64
CDK9-203ENST00000480353 TSKSQ9UJT2 592 aa19.04■□□□□ 0.64
CDK9-203ENST00000480353 PA2G4Q9UQ80 394 aaKnown RBP19.04■□□□□ 0.64
CDK9-203ENST00000480353 PCDHAC2Q9Y5I4 1007 aa19.04■□□□□ 0.64
CDK9-203ENST00000480353 FGFR2P21802 821 aa19.03■□□□□ 0.64
CDK9-203ENST00000480353 CRKP46108 304 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms