RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 SIK1P57059 783 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 HYAL2Q12891 473 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 TRIP4Q15650 581 aaPredicted RBP2.92□□□□□ -1.94
SRRM1-211ENST00000478890 OCLNQ16625 522 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 CEP135Q66GS9 1140 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 FAM117BQ6P1L5 589 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 TXNDC11Q6PKC3 985 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 ZNF438Q7Z4V0 828 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 ZMYND15Q9H091 742 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 PAK6Q9NQU5 681 aaPredicted RBP2.92□□□□□ -1.94
SRRM1-211ENST00000478890 BSDC1Q9NW68 430 aaPredicted RBP2.92□□□□□ -1.94
SRRM1-211ENST00000478890 STIM2Q9P246 746 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 LEMD3Q9Y2U8 911 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 KCNMB2Q9Y691 235 aa2.92□□□□□ -1.94
SRRM1-211ENST00000478890 LRRC10BA6NIK2 292 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 EGFRP00533 1210 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 CABP4P57796 275 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 ATP11AP98196 1134 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 DNM1Q05193 864 aaKnown RBP2.91□□□□□ -1.94
SRRM1-211ENST00000478890 CPSF6Q16630 551 aaKnown RBP eCLIP2.91□□□□□ -1.948e-10■□□□□ 9.4
SRRM1-211ENST00000478890 ZXDCQ2QGD7 858 aaPredicted RBP2.91□□□□□ -1.94
SRRM1-211ENST00000478890 C8orf34Q49A92 452 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 CAPN12Q6ZSI9 719 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 MAP4K3Q8IVH8 894 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 UTP4Q969X6 686 aaKnown RBP2.91□□□□□ -1.94
SRRM1-211ENST00000478890 COL26A1Q96A83 441 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 UBL7Q96S82 380 aaPredicted RBP2.91□□□□□ -1.94
SRRM1-211ENST00000478890 ABI2Q9NYB9 513 aaPredicted RBP2.91□□□□□ -1.94
SRRM1-211ENST00000478890 TRIM33Q9UPN9 1127 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 PPME1Q9Y570 386 aa2.91□□□□□ -1.94
SRRM1-211ENST00000478890 LINC01387J3KSC0 135 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 TNFRSF10BO14763 440 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 DEAF1O75398 565 aaPredicted RBP2.9□□□□□ -1.95
SRRM1-211ENST00000478890 RPLP1P05386 114 aaKnown RBP2.9□□□□□ -1.95
SRRM1-211ENST00000478890 GRIK5Q16478 980 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 ACAD11Q709F0 780 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 CLEC10AQ8IUN9 316 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 AGGF1Q8N302 714 aaeCLIP2.9□□□□□ -1.95
SRRM1-211ENST00000478890 OR13H1Q8NG92 308 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 EDEM1Q92611 657 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 TTC9Q92623 222 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 CLP1Q92989 425 aaKnown RBP2.9□□□□□ -1.95
SRRM1-211ENST00000478890 NUDT16Q96DE0 195 aaKnown RBP2.9□□□□□ -1.95
SRRM1-211ENST00000478890 FAM83CQ9BQN1 747 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 CEP41Q9BYV8 373 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 MUC3BQ9H195 1237 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 SRA1Q9HD15 236 aaKnown RBP2.9□□□□□ -1.95
SRRM1-211ENST00000478890 KANSL3Q9P2N6 904 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 SEPT3Q9UH03 358 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 MTMR7Q9Y216 660 aa2.9□□□□□ -1.95
SRRM1-211ENST00000478890 SART1O43290 800 aaKnown RBP2.89□□□□□ -1.95
SRRM1-211ENST00000478890 ABL1P00519 1130 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 PTPRAP18433 802 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 CES1P23141 567 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 CDC27P30260 824 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 FAM69CQ0P6D2 419 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 ATCAYQ86WG3 371 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 CACTIN-AS1Q8N1I8 211 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 CCDC82Q8N4S0 544 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 HELQQ8TDG4 1101 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 SLC7A3Q8WY07 619 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 CARD10Q9BWT7 1032 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 RASSF4Q9H2L5 321 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 ELP3Q9H9T3 547 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 ATG3Q9NT62 314 aa2.89□□□□□ -1.95
SRRM1-211ENST00000478890 AKAP8O43823 692 aaKnown RBP2.88□□□□□ -1.95
SRRM1-211ENST00000478890 CYP2E1P05181 493 aaPredicted RBP2.88□□□□□ -1.95
SRRM1-211ENST00000478890 MPSTP25325 297 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 CD68P34810 354 aaPredicted RBP2.88□□□□□ -1.95
SRRM1-211ENST00000478890 MTMR3Q13615 1198 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 DUOXA2Q1HG44 320 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 ZNF792Q3KQV3 632 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 NOM1Q5C9Z4 860 aaKnown RBP2.88□□□□□ -1.95
SRRM1-211ENST00000478890 FAM26DQ5JW98 314 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 COL13A1Q5TAT6 717 aaPredicted RBP2.88□□□□□ -1.95
SRRM1-211ENST00000478890 PDE12Q6L8Q7 609 aaKnown RBP2.88□□□□□ -1.95
SRRM1-211ENST00000478890 C14orf37Q86TY3 774 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 TMEM63CQ9P1W3 806 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 GTF3C3Q9Y5Q9 886 aa2.88□□□□□ -1.95
SRRM1-211ENST00000478890 A6NHS1 94 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 FSCN2O14926 492 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 ZBTB39O15060 712 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 GAS2O43903 313 aaKnown RBP2.87□□□□□ -1.95
SRRM1-211ENST00000478890 PHACTR2O75167 634 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 HOXD8P13378 290 aaPredicted RBP2.87□□□□□ -1.95
SRRM1-211ENST00000478890 EIF1AXP47813 144 aaKnown RBP2.87□□□□□ -1.95
SRRM1-211ENST00000478890 ARL4DP49703 201 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 NLRP12P59046 1061 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 SETDB1Q15047 1291 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 ALKBH2Q6NS38 261 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 FDX2Q6P4F2 183 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 KLHL23Q8NBE8 558 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 ASAP3Q8TDY4 903 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 GTF3C2Q8WUA4 911 aaPredicted RBP2.87□□□□□ -1.95
SRRM1-211ENST00000478890 PBX4Q9BYU1 374 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 KCNF1Q9H3M0 494 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 PARD6AQ9NPB6 346 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 SEC31BQ9NQW1 1179 aa2.87□□□□□ -1.95
SRRM1-211ENST00000478890 SH2B1Q9NRF2 756 aaPredicted RBP2.87□□□□□ -1.95
SRRM1-211ENST00000478890 H3BRJ5 948 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms