RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZFYVE28Q9HCC9 887 aa8.13□□□□□ -1.11
UBR3-209ENST00000477461 IGLV1-40P01703 118 aa8.12□□□□□ -1.11
UBR3-209ENST00000477461 PEAR1Q5VY43 1037 aaPredicted RBP8.12□□□□□ -1.11
UBR3-209ENST00000477461 ERICH6Q7L0X2 663 aa8.12□□□□□ -1.11
UBR3-209ENST00000477461 WNT8BQ93098 351 aa8.12□□□□□ -1.11
UBR3-209ENST00000477461 C7orf69Q9H7B7 122 aa8.12□□□□□ -1.11
UBR3-209ENST00000477461 PCMTD2Q9NV79 361 aa8.12□□□□□ -1.11
UBR3-209ENST00000477461 AMOTL2Q9Y2J4 779 aa8.12□□□□□ -1.11
UBR3-209ENST00000477461 H3BRB1 525 aa8.11□□□□□ -1.11
UBR3-209ENST00000477461 ICMTO60725 284 aa8.11□□□□□ -1.11
UBR3-209ENST00000477461 BMP3P12645 472 aa8.11□□□□□ -1.11
UBR3-209ENST00000477461 PREPP48147 710 aa8.11□□□□□ -1.11
UBR3-209ENST00000477461 GJD3Q8N144 294 aa8.11□□□□□ -1.11
UBR3-209ENST00000477461 PSMG3-AS1Q96PY0 264 aa8.11□□□□□ -1.11
UBR3-209ENST00000477461 TUT1Q9H6E5 874 aaKnown RBP8.11□□□□□ -1.11
UBR3-209ENST00000477461 MED26O95402 600 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 TGFB1P01137 390 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 USPL1Q5W0Q7 1092 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 FDX2Q6P4F2 183 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 GLYCTKQ8IVS8 523 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 C12orf50Q8NA57 414 aaPredicted RBP8.1□□□□□ -1.11
UBR3-209ENST00000477461 MYRFLQ96LU7 910 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
UBR3-209ENST00000477461 DLGAP3O95886 979 aa8.09□□□□□ -1.11
UBR3-209ENST00000477461 GSTM4Q03013 218 aa8.09□□□□□ -1.11
UBR3-209ENST00000477461 BEND4Q6ZU67 534 aa8.09□□□□□ -1.11
UBR3-209ENST00000477461 FAM20CQ8IXL6 584 aa8.09□□□□□ -1.11
UBR3-209ENST00000477461 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
UBR3-209ENST00000477461 DRD2P14416 443 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 NFIAQ12857 509 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 ECM1Q16610 540 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 UVSSAQ2YD98 709 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 SLC51AQ86UW1 340 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 BHLHE41Q9C0J9 482 aaPredicted RBP8.08□□□□□ -1.12
UBR3-209ENST00000477461 USTQ9Y2C2 406 aa8.08□□□□□ -1.12
UBR3-209ENST00000477461 A0A1W2PP55 124 aa8.07□□□□□ -1.12
UBR3-209ENST00000477461 GSC2O15499 205 aa8.07□□□□□ -1.12
UBR3-209ENST00000477461 GAS2O43903 313 aaKnown RBP8.07□□□□□ -1.12
UBR3-209ENST00000477461 RXRBP28702 533 aa8.07□□□□□ -1.12
UBR3-209ENST00000477461 RNF43Q68DV7 783 aa8.07□□□□□ -1.12
UBR3-209ENST00000477461 ZDHHC13Q8IUH4 622 aa8.07□□□□□ -1.12
UBR3-209ENST00000477461 LOC100289279A0A1B0GTE1 492 aa8.06□□□□□ -1.12
UBR3-209ENST00000477461 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
UBR3-209ENST00000477461 CLEC10AQ8IUN9 316 aa8.06□□□□□ -1.12
UBR3-209ENST00000477461 FAM83CQ9BQN1 747 aa8.06□□□□□ -1.12
UBR3-209ENST00000477461 A0A096LPE4 126 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 A0A1W2PPZ6 126 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 GRIA4P48058 902 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 ORC1Q13415 861 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 ZNF423Q2M1K9 1284 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.05□□□□□ -1.12
UBR3-209ENST00000477461 TMC1Q8TDI8 760 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 LIN7BQ9HAP6 207 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 EGFL7Q9UHF1 273 aa8.05□□□□□ -1.12
UBR3-209ENST00000477461 MEGF11A6BM72 1044 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 COBLO75128 1261 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 MAP4P27816 1152 aaKnown RBP8.04□□□□□ -1.12
UBR3-209ENST00000477461 CD97P48960 835 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 GALNT12Q8IXK2 581 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 FBXL6Q8N531 539 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 RETREG2Q8NC44 543 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 SHKBP1Q8TBC3 707 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 MFSD14AQ96MC6 490 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 DBNDD2Q9BQY9 259 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 TMPRSS13Q9BYE2 586 aa8.04□□□□□ -1.12
UBR3-209ENST00000477461 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
UBR3-209ENST00000477461 PCDH1Q08174 1060 aa8.03□□□□□ -1.12
UBR3-209ENST00000477461 EXOSC6Q5RKV6 272 aaKnown RBP8.03□□□□□ -1.12
UBR3-209ENST00000477461 CCNJLQ8IV13 435 aa8.03□□□□□ -1.12
UBR3-209ENST00000477461 TCF12Q99081 682 aa8.03□□□□□ -1.12
UBR3-209ENST00000477461 CYP4F12Q9HCS2 524 aa8.03□□□□□ -1.12
UBR3-209ENST00000477461 NDUFB5O43674 189 aa8.02□□□□□ -1.13
UBR3-209ENST00000477461 USP11P51784 963 aa8.02□□□□□ -1.13
UBR3-209ENST00000477461 NFKBIBQ15653 356 aa8.02□□□□□ -1.13
UBR3-209ENST00000477461 FBLIM1Q8WUP2 373 aa8.02□□□□□ -1.13
UBR3-209ENST00000477461 NIF3L1Q9GZT8 377 aa8.02□□□□□ -1.13
UBR3-209ENST00000477461 PRR19A6NJB7 356 aa8.01□□□□□ -1.13
UBR3-209ENST00000477461 CTSBP07858 339 aa8.01□□□□□ -1.13
UBR3-209ENST00000477461 MAOBP27338 520 aa8.01□□□□□ -1.13
UBR3-209ENST00000477461 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
UBR3-209ENST00000477461 SHISA5Q8N114 240 aa8.01□□□□□ -1.13
UBR3-209ENST00000477461 SMG8Q8ND04 991 aaKnown RBP8.01□□□□□ -1.13
UBR3-209ENST00000477461 EHD4Q9H223 541 aa8.01□□□□□ -1.13
UBR3-209ENST00000477461 CLEC4MQ9H2X3 399 aaPredicted RBP8.01□□□□□ -1.13
UBR3-209ENST00000477461 SOX17Q9H6I2 414 aaPredicted RBP8.01□□□□□ -1.13
UBR3-209ENST00000477461 ADAMTS4O75173 837 aa8□□□□□ -1.13
UBR3-209ENST00000477461 NPHS2Q9NP85 383 aa8□□□□□ -1.13
UBR3-209ENST00000477461 CPNE3O75131 537 aaKnown RBP7.99□□□□□ -1.13
UBR3-209ENST00000477461 TIAF1O95411 115 aa7.99□□□□□ -1.13
UBR3-209ENST00000477461 ECEL1O95672 775 aa7.99□□□□□ -1.13
UBR3-209ENST00000477461 NEFLP07196 543 aa7.99□□□□□ -1.13
UBR3-209ENST00000477461 POU4F3Q15319 338 aa7.99□□□□□ -1.13
UBR3-209ENST00000477461 TXNDC2Q86VQ3 553 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms