RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 SRCIN1Q9C0H9 1055 aa14.78□□□□□ -0.04
VARS2-208ENST00000477052 HDAC9Q9UKV0 1011 aa14.78□□□□□ -0.04
VARS2-208ENST00000477052 AKAP11Q9UKA4 1901 aa14.77□□□□□ -0.04
VARS2-208ENST00000477052 TBC1D8O95759 1140 aa14.77□□□□□ -0.05
VARS2-208ENST00000477052 GYG1P46976 350 aa14.77□□□□□ -0.05
VARS2-208ENST00000477052 FKBP1BP68106 108 aa14.77□□□□□ -0.05
VARS2-208ENST00000477052 DLGAP5Q15398 846 aa14.77□□□□□ -0.05
VARS2-208ENST00000477052 ZNF804AQ7Z570 1209 aa14.77□□□□□ -0.05
VARS2-208ENST00000477052 SAGE1Q9NXZ1 904 aa14.77□□□□□ -0.05
VARS2-208ENST00000477052 ZNF521Q96K83 1311 aa14.76□□□□□ -0.05
VARS2-208ENST00000477052 ALDH1L1O75891 902 aa14.76□□□□□ -0.05
VARS2-208ENST00000477052 IL1R1P14778 569 aa14.76□□□□□ -0.05
VARS2-208ENST00000477052 CFAP100Q494V2 611 aa14.76□□□□□ -0.05
VARS2-208ENST00000477052 C15orf52Q6ZUT6 534 aaKnown RBP14.76□□□□□ -0.05
VARS2-208ENST00000477052 MRPL50Q8N5N7 158 aaKnown RBP14.76□□□□□ -0.05
VARS2-208ENST00000477052 NF2P35240 595 aa14.75□□□□□ -0.05
VARS2-208ENST00000477052 APOBEC3FQ8IUX4 373 aaKnown RBP14.75□□□□□ -0.05
VARS2-208ENST00000477052 PRMT6Q96LA8 375 aaPredicted RBP14.75□□□□□ -0.05
VARS2-208ENST00000477052 DEFB129Q9H1M3 183 aa14.75□□□□□ -0.05
VARS2-208ENST00000477052 BICC1Q9H694 974 aaKnown RBP14.75□□□□□ -0.05
VARS2-208ENST00000477052 ANGEL1Q9UNK9 670 aaKnown RBP14.75□□□□□ -0.05
VARS2-208ENST00000477052 IQSEC3Q9UPP2 1182 aaPredicted RBP14.75□□□□□ -0.05
VARS2-208ENST00000477052 RBM5P52756 815 aaKnown RBP eCLIP14.74□□□□□ -0.05
VARS2-208ENST00000477052 LRRC24Q50LG9 513 aa14.74□□□□□ -0.05
VARS2-208ENST00000477052 KLHDC4Q8TBB5 520 aa14.74□□□□□ -0.05
VARS2-208ENST00000477052 CLMNQ96JQ2 1002 aa14.74□□□□□ -0.05
VARS2-208ENST00000477052 R3HDMLQ9H3Y0 253 aa14.74□□□□□ -0.05
VARS2-208ENST00000477052 VEZTQ9HBM0 779 aa14.74□□□□□ -0.05
VARS2-208ENST00000477052 SSC5DA1L4H1 1573 aa14.73□□□□□ -0.05
VARS2-208ENST00000477052 GRIK5Q16478 980 aa14.73□□□□□ -0.05
VARS2-208ENST00000477052 ARMC9Q7Z3E5 817 aa14.73□□□□□ -0.05
VARS2-208ENST00000477052 ANKRD44Q8N8A2 993 aa14.73□□□□□ -0.05
VARS2-208ENST00000477052 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
VARS2-208ENST00000477052 CDCA7LQ96GN5 454 aa14.73□□□□□ -0.05
VARS2-208ENST00000477052 FAM84BQ96KN1 310 aaPredicted RBP14.73□□□□□ -0.05
VARS2-208ENST00000477052 SPDYE2BA6NHP3 402 aa14.72□□□□□ -0.05
VARS2-208ENST00000477052 SPDYE6P0CI01 402 aa14.72□□□□□ -0.05
VARS2-208ENST00000477052 SOX10P56693 466 aa14.72□□□□□ -0.05
VARS2-208ENST00000477052 MLLT1Q03111 559 aaPredicted RBP14.72□□□□□ -0.05
VARS2-208ENST00000477052 NBPF12Q5TAG4 269 aaPredicted RBP14.72□□□□□ -0.05
VARS2-208ENST00000477052 RIPOR2Q9Y4F9 1068 aa14.72□□□□□ -0.05
VARS2-208ENST00000477052 HIBADHP31937 336 aaKnown RBP14.71□□□□□ -0.05
VARS2-208ENST00000477052 CHAF1AQ13111 956 aaPredicted RBP14.71□□□□□ -0.05
VARS2-208ENST00000477052 MFSD14BQ5SR56 506 aa14.71□□□□□ -0.05
VARS2-208ENST00000477052 LDLRAD1Q5T700 205 aa14.71□□□□□ -0.05
VARS2-208ENST00000477052 CDAN1Q8IWY9 1227 aa14.71□□□□□ -0.05
VARS2-208ENST00000477052 MTMR14Q8NCE2 650 aa14.71□□□□□ -0.05
VARS2-208ENST00000477052 TDRD7Q8NHU6 1098 aaKnown RBP14.71□□□□□ -0.05
VARS2-208ENST00000477052 ZNF296Q8WUU4 475 aaPredicted RBP14.71□□□□□ -0.05
VARS2-208ENST00000477052 TDRD3Q9H7E2 651 aaKnown RBP14.71□□□□□ -0.05
VARS2-208ENST00000477052 UTYO14607 1347 aa14.7□□□□□ -0.06
VARS2-208ENST00000477052 TM4SF4P48230 202 aa14.7□□□□□ -0.06
VARS2-208ENST00000477052 RGS19P49795 217 aa14.7□□□□□ -0.06
VARS2-208ENST00000477052 UBE4AQ14139 1066 aa14.7□□□□□ -0.06
VARS2-208ENST00000477052 SPRYD7Q5W111 196 aa14.7□□□□□ -0.06
VARS2-208ENST00000477052 CTU1Q7Z7A3 348 aaKnown RBP14.7□□□□□ -0.06
VARS2-208ENST00000477052 SLC10A4Q96EP9 437 aa14.7□□□□□ -0.06
VARS2-208ENST00000477052 TTF2Q9UNY4 1162 aaKnown RBP14.7□□□□□ -0.06
VARS2-208ENST00000477052 FAM205AQ6ZU69 1335 aa14.69□□□□□ -0.06
VARS2-208ENST00000477052 MYO1BO43795 1136 aa14.69□□□□□ -0.06
VARS2-208ENST00000477052 MMP14P50281 582 aa14.69□□□□□ -0.06
VARS2-208ENST00000477052 SLFN5Q08AF3 891 aa14.69□□□□□ -0.06
VARS2-208ENST00000477052 RASA3Q14644 834 aa14.69□□□□□ -0.06
VARS2-208ENST00000477052 METTL24Q5JXM2 366 aa14.69□□□□□ -0.06
VARS2-208ENST00000477052 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
VARS2-208ENST00000477052 USP44Q9H0E7 712 aa14.69□□□□□ -0.06
VARS2-208ENST00000477052 TCP10L2B9ZVM9 353 aa14.68□□□□□ -0.06
VARS2-208ENST00000477052 E9PSI1 815 aa14.68□□□□□ -0.06
VARS2-208ENST00000477052 BCAMP50895 628 aa14.68□□□□□ -0.06
VARS2-208ENST00000477052 FKBP1AP62942 108 aaKnown RBP14.68□□□□□ -0.06
VARS2-208ENST00000477052 RABL6Q3YEC7 729 aaPredicted RBP14.68□□□□□ -0.06
VARS2-208ENST00000477052 ZNF70Q9UC06 446 aaPredicted RBP14.68□□□□□ -0.06
VARS2-208ENST00000477052 ECM29Q5VYK3 1845 aa14.68□□□□□ -0.06
VARS2-208ENST00000477052 MROH5Q6ZUA9 1318 aa14.67□□□□□ -0.06
VARS2-208ENST00000477052 GPR25O00155 361 aa14.67□□□□□ -0.06
VARS2-208ENST00000477052 USP2O75604 605 aaPredicted RBP14.67□□□□□ -0.06
VARS2-208ENST00000477052 GJA5P36382 358 aa14.67□□□□□ -0.06
VARS2-208ENST00000477052 CACNB3P54284 484 aa14.67□□□□□ -0.06
VARS2-208ENST00000477052 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
VARS2-208ENST00000477052 VPS37DQ86XT2 251 aa14.67□□□□□ -0.06
VARS2-208ENST00000477052 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
VARS2-208ENST00000477052 VGLL2Q8N8G2 317 aa14.67□□□□□ -0.06
VARS2-208ENST00000477052 COL1A1P02452 1464 aaPredicted RBP14.66□□□□□ -0.06
VARS2-208ENST00000477052 PPP1R12BO60237 982 aaPredicted RBP14.66□□□□□ -0.06
VARS2-208ENST00000477052 FRAT2O75474 233 aaPredicted RBP14.66□□□□□ -0.06
VARS2-208ENST00000477052 CRKP46108 304 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 SREBF2Q12772 1141 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 WNK4Q96J92 1243 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 SMC4Q9NTJ3 1288 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 HPS5Q9UPZ3 1129 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 PTPRCP08575 1304 aa14.66□□□□□ -0.06
VARS2-208ENST00000477052 IGF2BP3O00425 579 aaKnown RBP eCLIP14.65□□□□□ -0.06
VARS2-208ENST00000477052 PDE8BO95263 885 aa14.65□□□□□ -0.06
VARS2-208ENST00000477052 MAP3K11Q16584 847 aa14.65□□□□□ -0.06
VARS2-208ENST00000477052 SUPT20HL1Q3ZLR7 823 aa14.65□□□□□ -0.06
VARS2-208ENST00000477052 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
VARS2-208ENST00000477052 ELP3Q9H9T3 547 aa14.65□□□□□ -0.06
VARS2-208ENST00000477052 SERPINA10Q9UK55 444 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms