RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 TDRD7Q8NHU6 1098 aaKnown RBP40.33■■■■■ 4.05
CHKB-207ENST00000476289 ZBED3Q96IU2 234 aaPredicted RBP40.33■■■■■ 4.05
CHKB-207ENST00000476289 BCAR3O75815 825 aa40.32■■■■■ 4.05
CHKB-207ENST00000476289 MAP2K1Q02750 393 aaPredicted RBP40.32■■■■■ 4.05
CHKB-207ENST00000476289 C2orf69Q8N8R5 385 aa40.32■■■■■ 4.05
CHKB-207ENST00000476289 MEIS3Q99687 375 aa40.32■■■■■ 4.05
CHKB-207ENST00000476289 PDE8BO95263 885 aa40.31■■■■■ 4.04
CHKB-207ENST00000476289 FKBP1AP62942 108 aaKnown RBP40.31■■■■■ 4.04
CHKB-207ENST00000476289 PTPN12Q05209 780 aaKnown RBP40.31■■■■■ 4.04
CHKB-207ENST00000476289 LRRFIP2Q9Y608 721 aaKnown RBP40.31■■■■■ 4.04
CHKB-207ENST00000476289 INTS3Q68E01 1043 aaKnown RBP40.3■■■■■ 4.04
CHKB-207ENST00000476289 TNNQ9UQP3 1299 aa40.3■■■■■ 4.04
CHKB-207ENST00000476289 FAM205AQ6ZU69 1335 aa40.3■■■■■ 4.04
CHKB-207ENST00000476289 F8W031 263 aaPredicted RBP40.29■■■■■ 4.04
CHKB-207ENST00000476289 EYA2O00167 538 aa40.28■■■■■ 4.04
CHKB-207ENST00000476289 TRIM27P14373 513 aa40.28■■■■■ 4.04
CHKB-207ENST00000476289 MAP2K2P36507 400 aa40.28■■■■■ 4.04
CHKB-207ENST00000476289 PCDHAC2Q9Y5I4 1007 aa40.28■■■■■ 4.04
CHKB-207ENST00000476289 ARAP2Q8WZ64 1704 aa40.28■■■■■ 4.04
CHKB-207ENST00000476289 CTCFP49711 727 aaPredicted RBP40.27■■■■■ 4.04
CHKB-207ENST00000476289 PRAMEF18Q5VWM3 479 aa40.27■■■■■ 4.04
CHKB-207ENST00000476289 FBXO33Q7Z6M2 555 aa40.27■■■■■ 4.04
CHKB-207ENST00000476289 PAPPA2Q9BXP8 1791 aa40.25■■■■■ 4.03
CHKB-207ENST00000476289 ATG9AQ7Z3C6 839 aa40.25■■■■■ 4.03
CHKB-207ENST00000476289 FRAT1Q92837 279 aaPredicted RBP40.25■■■■■ 4.03
CHKB-207ENST00000476289 DLGAP5Q15398 846 aa40.24■■■■■ 4.03
CHKB-207ENST00000476289 RGMBQ6NW40 437 aa40.24■■■■■ 4.03
CHKB-207ENST00000476289 ATF7IPQ6VMQ6 1270 aa40.24■■■■■ 4.03
CHKB-207ENST00000476289 MTMR14Q8NCE2 650 aa40.24■■■■■ 4.03
CHKB-207ENST00000476289 IQSEC3Q9UPP2 1182 aaPredicted RBP40.24■■■■■ 4.03
CHKB-207ENST00000476289 ECM29Q5VYK3 1845 aa40.23■■■■■ 4.03
CHKB-207ENST00000476289 IPO8O15397 1037 aaKnown RBP40.23■■■■■ 4.03
CHKB-207ENST00000476289 FGFR2P21802 821 aa40.23■■■■■ 4.03
CHKB-207ENST00000476289 PUM3Q15397 648 aaKnown RBP40.23■■■■■ 4.03
CHKB-207ENST00000476289 MFSD14BQ5SR56 506 aa40.23■■■■■ 4.03
CHKB-207ENST00000476289 ZIC5Q96T25 663 aa40.23■■■■■ 4.03
CHKB-207ENST00000476289 SIL1Q9H173 461 aa40.23■■■■■ 4.03
CHKB-207ENST00000476289 HSPA8P11142 646 aaKnown RBP40.22■■■■■ 4.03
CHKB-207ENST00000476289 VPS37DQ86XT2 251 aa40.22■■■■■ 4.03
CHKB-207ENST00000476289 FAM155AB1AL88 458 aaPredicted RBP40.21■■■■■ 4.03
CHKB-207ENST00000476289 LBX1P52954 281 aa40.21■■■■■ 4.03
CHKB-207ENST00000476289 CFAP100Q494V2 611 aa40.21■■■■■ 4.03
CHKB-207ENST00000476289 APOBEC3FQ8IUX4 373 aaKnown RBP40.21■■■■■ 4.03
CHKB-207ENST00000476289 AOX1Q06278 1338 aa40.2■■■■■ 4.03
CHKB-207ENST00000476289 NOGQ13253 232 aa40.2■■■■■ 4.03
CHKB-207ENST00000476289 CAVIN4Q5BKX8 364 aa40.2■■■■■ 4.03
CHKB-207ENST00000476289 TNS4Q8IZW8 715 aa40.2■■■■■ 4.03
CHKB-207ENST00000476289 PRDM10Q9NQV6 1147 aa40.2■■■■■ 4.03
CHKB-207ENST00000476289 HDAC5Q9UQL6 1122 aa40.2■■■■■ 4.03
CHKB-207ENST00000476289 SPDYE2BA6NHP3 402 aa40.19■■■■■ 4.02
CHKB-207ENST00000476289 SPDYE6P0CI01 402 aa40.19■■■■■ 4.02
CHKB-207ENST00000476289 BCAMP50895 628 aa40.19■■■■■ 4.02
CHKB-207ENST00000476289 MOB2Q70IA6 237 aa40.19■■■■■ 4.02
CHKB-207ENST00000476289 CLUAP1Q96AJ1 413 aa40.19■■■■■ 4.02
CHKB-207ENST00000476289 ZBED9Q6R2W3 1325 aa40.18■■■■■ 4.02
CHKB-207ENST00000476289 ZNF157P51786 506 aaPredicted RBP40.18■■■■■ 4.02
CHKB-207ENST00000476289 FKBP1BP68106 108 aa40.18■■■■■ 4.02
CHKB-207ENST00000476289 PA2G4Q9UQ80 394 aaKnown RBP40.18■■■■■ 4.02
CHKB-207ENST00000476289 CIAO1O76071 339 aa40.17■■■■■ 4.02
CHKB-207ENST00000476289 GNAI3P08754 354 aa40.17■■■■■ 4.02
CHKB-207ENST00000476289 IFIT1P09914 478 aaKnown RBP40.17■■■■■ 4.02
CHKB-207ENST00000476289 PRMT6Q96LA8 375 aaPredicted RBP40.17■■■■■ 4.02
CHKB-207ENST00000476289 BEGAINQ9BUH8 593 aa40.17■■■■■ 4.02
CHKB-207ENST00000476289 CHAF1AQ13111 956 aaPredicted RBP40.16■■■■■ 4.02
CHKB-207ENST00000476289 GRIK5Q16478 980 aa40.16■■■■■ 4.02
CHKB-207ENST00000476289 FBXO3Q9UK99 471 aa40.16■■■■■ 4.02
CHKB-207ENST00000476289 TTF2Q9UNY4 1162 aaKnown RBP40.16■■■■■ 4.02
CHKB-207ENST00000476289 CLRN2A0PK11 232 aa40.14■■■■■ 4.02
CHKB-207ENST00000476289 LPIN2Q92539 896 aa40.14■■■■■ 4.02
CHKB-207ENST00000476289 CCDC102AQ96A19 550 aa40.14■■■■■ 4.02
CHKB-207ENST00000476289 FRAT2O75474 233 aaPredicted RBP40.13■■■■■ 4.01
CHKB-207ENST00000476289 SLC10A3P09131 477 aa40.13■■■■■ 4.01
CHKB-207ENST00000476289 SLC5A1P13866 664 aa40.13■■■■■ 4.01
CHKB-207ENST00000476289 RBM5P52756 815 aaKnown RBP eCLIP40.13■■■■■ 4.01
CHKB-207ENST00000476289 COPRSQ9NQ92 184 aa40.13■■■■■ 4.01
CHKB-207ENST00000476289 COL1A1P02452 1464 aaPredicted RBP40.13■■■■■ 4.01
CHKB-207ENST00000476289 ZKSCAN2Q63HK3 967 aa40.12■■■■■ 4.01
CHKB-207ENST00000476289 TSKSQ9UJT2 592 aa40.12■■■■■ 4.01
CHKB-207ENST00000476289 UBE2Q2LH0YL09 131 aa40.11■■■■■ 4.01
CHKB-207ENST00000476289 DEFB129Q9H1M3 183 aa40.11■■■■■ 4.01
CHKB-207ENST00000476289 MYO1BO43795 1136 aa40.1■■■■■ 4.01
CHKB-207ENST00000476289 RASAL3Q86YV0 1011 aa40.1■■■■■ 4.01
CHKB-207ENST00000476289 TMEM57Q8N5G2 664 aa40.1■■■■■ 4.01
CHKB-207ENST00000476289 CEP126Q9P2H0 1117 aa40.1■■■■■ 4.01
CHKB-207ENST00000476289 SERPINA10Q9UK55 444 aa40.1■■■■■ 4.01
CHKB-207ENST00000476289 MYH13Q9UKX3 1938 aa40.1■■■■■ 4.01
CHKB-207ENST00000476289 NF2P35240 595 aa40.09■■■■■ 4.01
CHKB-207ENST00000476289 IL15P40933 162 aaPredicted RBP40.09■■■■■ 4.01
CHKB-207ENST00000476289 MTX1Q13505 466 aa40.09■■■■■ 4.01
CHKB-207ENST00000476289 ATP2B3Q16720 1220 aa40.09■■■■■ 4.01
CHKB-207ENST00000476289 SRGAP3O43295 1099 aa40.08■■■■■ 4.01
CHKB-207ENST00000476289 KIF23Q02241 960 aaPredicted RBP40.08■■■■■ 4.01
CHKB-207ENST00000476289 TTLL12Q14166 644 aaPredicted RBP40.08■■■■■ 4.01
CHKB-207ENST00000476289 TBC1D22AQ8WUA7 517 aa40.08■■■■■ 4.01
CHKB-207ENST00000476289 VEZTQ9HBM0 779 aa40.08■■■■■ 4.01
CHKB-207ENST00000476289 SSC5DA1L4H1 1573 aa40.06■■■■■ 4
CHKB-207ENST00000476289 CRKP46108 304 aa40.05■■■■■ 4
CHKB-207ENST00000476289 PRKG1Q13976 671 aa40.05■■■■■ 4
CHKB-207ENST00000476289 CA12O43570 354 aa40.04■■■■■ 4
CHKB-207ENST00000476289 GNAI2P04899 355 aa40.04■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms