RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 USPL1Q5W0Q7 1092 aa8.44□□□□□ -1.06
SSR3-206ENST00000476217 FRMD6Q96NE9 622 aa8.44□□□□□ -1.06
SSR3-206ENST00000476217 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
SSR3-206ENST00000476217 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
SSR3-206ENST00000476217 SOX13Q9UN79 622 aa8.44□□□□□ -1.06
SSR3-206ENST00000476217 ACPPP15309 386 aa8.43□□□□□ -1.06
SSR3-206ENST00000476217 PRPF40BQ6NWY9 871 aaKnown RBP8.43□□□□□ -1.06
SSR3-206ENST00000476217 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
SSR3-206ENST00000476217 LENG1Q96BZ8 264 aaPredicted RBP8.43□□□□□ -1.06
SSR3-206ENST00000476217 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
SSR3-206ENST00000476217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.43□□□□□ -1.06
SSR3-206ENST00000476217 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
SSR3-206ENST00000476217 KRBA1A5PL33 1030 aa8.42□□□□□ -1.06
SSR3-206ENST00000476217 ANKRD33BA6NCL7 494 aa8.42□□□□□ -1.06
SSR3-206ENST00000476217 XRCC5P13010 732 aaKnown RBP8.42□□□□□ -1.06
SSR3-206ENST00000476217 ITGAEP38570 1179 aa8.42□□□□□ -1.06
SSR3-206ENST00000476217 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
SSR3-206ENST00000476217 TMCO4Q5TGY1 634 aa8.42□□□□□ -1.06
SSR3-206ENST00000476217 SOX17Q9H6I2 414 aaPredicted RBP8.42□□□□□ -1.06
SSR3-206ENST00000476217 SEC31BQ9NQW1 1179 aa8.42□□□□□ -1.06
SSR3-206ENST00000476217 FANCD2Q9BXW9 1451 aa8.42□□□□□ -1.06
SSR3-206ENST00000476217 A0A096LPE4 126 aa8.41□□□□□ -1.06
SSR3-206ENST00000476217 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
SSR3-206ENST00000476217 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
SSR3-206ENST00000476217 FSCN2O14926 492 aa8.41□□□□□ -1.06
SSR3-206ENST00000476217 EPHA1P21709 976 aa8.41□□□□□ -1.06
SSR3-206ENST00000476217 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
SSR3-206ENST00000476217 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
SSR3-206ENST00000476217 TCF12Q99081 682 aa8.41□□□□□ -1.06
SSR3-206ENST00000476217 MRPL18Q9H0U6 180 aaKnown RBP8.41□□□□□ -1.06
SSR3-206ENST00000476217 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
SSR3-206ENST00000476217 SYNJ1O43426 1573 aa8.4□□□□□ -1.06
SSR3-206ENST00000476217 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
SSR3-206ENST00000476217 DLL1O00548 723 aa8.4□□□□□ -1.06
SSR3-206ENST00000476217 TRPA1O75762 1119 aa8.4□□□□□ -1.06
SSR3-206ENST00000476217 ITPKAP23677 461 aa8.4□□□□□ -1.06
SSR3-206ENST00000476217 IKBKEQ14164 716 aa8.4□□□□□ -1.06
SSR3-206ENST00000476217 PLA2G4EQ3MJ16 856 aa8.4□□□□□ -1.06
SSR3-206ENST00000476217 DNAJC14Q6Y2X3 702 aaPredicted RBP8.4□□□□□ -1.06
SSR3-206ENST00000476217 CLEC4MQ9H2X3 399 aaPredicted RBP8.4□□□□□ -1.06
SSR3-206ENST00000476217 CEP164Q9UPV0 1460 aa8.39□□□□□ -1.07
SSR3-206ENST00000476217 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
SSR3-206ENST00000476217 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
SSR3-206ENST00000476217 LDHBP07195 334 aaKnown RBP8.39□□□□□ -1.07
SSR3-206ENST00000476217 P4HBP07237 508 aaKnown RBP8.39□□□□□ -1.07
SSR3-206ENST00000476217 CD68P34810 354 aaPredicted RBP8.39□□□□□ -1.07
SSR3-206ENST00000476217 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
SSR3-206ENST00000476217 GRIK4Q16099 956 aa8.39□□□□□ -1.07
SSR3-206ENST00000476217 RPS26P11Q5JNZ5 115 aaPredicted RBP8.39□□□□□ -1.07
SSR3-206ENST00000476217 HHIPQ96QV1 700 aa8.39□□□□□ -1.07
SSR3-206ENST00000476217 BCL11AQ9H165 835 aa8.39□□□□□ -1.07
SSR3-206ENST00000476217 SH2B1Q9NRF2 756 aaPredicted RBP8.39□□□□□ -1.07
SSR3-206ENST00000476217 KIF21AQ7Z4S6 1674 aa8.38□□□□□ -1.07
SSR3-206ENST00000476217 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
SSR3-206ENST00000476217 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
SSR3-206ENST00000476217 VN1R5Q7Z5H4 357 aa8.38□□□□□ -1.07
SSR3-206ENST00000476217 TMEM130Q8N3G9 435 aa8.38□□□□□ -1.07
SSR3-206ENST00000476217 EPS8L3Q8TE67 593 aaKnown RBP8.38□□□□□ -1.07
SSR3-206ENST00000476217 USP21Q9UK80 565 aa8.38□□□□□ -1.07
SSR3-206ENST00000476217 TOP2BQ02880 1626 aa8.38□□□□□ -1.07
SSR3-206ENST00000476217 BIVM-ERCC5R4GMW8 1640 aa8.38□□□□□ -1.07
SSR3-206ENST00000476217 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 C1QTNF9BB2RNN3 333 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 SELPP16109 830 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 GRIA4P48058 902 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 GRM2Q14416 872 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSR3-206ENST00000476217 CD163Q86VB7 1156 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 NPAS4Q8IUM7 802 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 BCO2Q9BYV7 579 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
SSR3-206ENST00000476217 CUX1P39880 1505 aa8.36□□□□□ -1.07
SSR3-206ENST00000476217 MSTNO14793 375 aa8.36□□□□□ -1.07
SSR3-206ENST00000476217 ESRRAP11474 423 aaPredicted RBP8.36□□□□□ -1.07
SSR3-206ENST00000476217 GATA4P43694 442 aa8.36□□□□□ -1.07
SSR3-206ENST00000476217 HP1BP3Q5SSJ5 553 aaPredicted RBP8.36□□□□□ -1.07
SSR3-206ENST00000476217 ADAMTSL4Q6UY14 1074 aa8.36□□□□□ -1.07
SSR3-206ENST00000476217 DTHD1Q6ZMT9 781 aa8.36□□□□□ -1.07
SSR3-206ENST00000476217 GSTT1P30711 240 aa8.35□□□□□ -1.07
SSR3-206ENST00000476217 CHRNA4P43681 627 aa8.35□□□□□ -1.07
SSR3-206ENST00000476217 HNRNPUQ00839 825 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSR3-206ENST00000476217 PCDH1Q08174 1060 aa8.35□□□□□ -1.07
SSR3-206ENST00000476217 TXNDC11Q6PKC3 985 aa8.35□□□□□ -1.07
SSR3-206ENST00000476217 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
SSR3-206ENST00000476217 GLIS3Q8NEA6 775 aa8.35□□□□□ -1.07
SSR3-206ENST00000476217 ZNF576Q9H609 170 aa8.35□□□□□ -1.07
SSR3-206ENST00000476217 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
SSR3-206ENST00000476217 CDC25BP30305 580 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 GNA15P30679 374 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 GALNT11Q8NCW6 608 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 SLC7A3Q8WY07 619 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 FAM8A1Q9UBU6 413 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 DNMBPQ6XZF7 1577 aa8.34□□□□□ -1.07
SSR3-206ENST00000476217 ERCC6Q03468 1493 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 METTL12A8MUP2 240 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 B3GALT4O96024 378 aa8.33□□□□□ -1.08
SSR3-206ENST00000476217 CYP11A1P05108 521 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms