RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 MAP3K9P80192 1104 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 ADCK5Q3MIX3 580 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 ANO6Q4KMQ2 910 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 TTC39AQ5SRH9 613 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 CCDC186Q7Z3E2 898 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 CACNA2D4Q7Z3S7 1137 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 C10orf67Q8IYJ2 551 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 PLCD3Q8N3E9 789 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 FAM200AQ8TCP9 573 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 EDC3Q96F86 508 aaKnown RBP6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 DDX21Q9NR30 783 aaKnown RBP eCLIP6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 NDUFB9Q9Y6M9 179 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 COL3A1P02461 1466 aaPredicted RBP6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 NEURL4Q96JN8 1562 aa6.97□□□□□ -1.29
HNRNPU-208ENST00000475997 FAM177BA6PVY3 158 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 CYP2E1P05181 493 aaPredicted RBP6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 TMEM132AQ24JP5 1023 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 B4GALNT4Q76KP1 1039 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 SUCLG2Q96I99 432 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 CCDC77Q9BR77 488 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 CTNNA3Q9UI47 895 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 ANAPC4Q9UJX5 808 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 PPLO60437 1756 aa6.96□□□□□ -1.29
HNRNPU-208ENST00000475997 CTAGE15A4D2H0 777 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 HOXB7P09629 217 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 CTAGE8P0CG41 777 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 TYRO3Q06418 890 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 CHRNA2Q15822 529 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 IFI16Q16666 785 aaKnown RBP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 LMBR1LQ6UX01 489 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 Q6ZUG5 572 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 CTAGE6Q86UF2 777 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 CTAGE4Q8IX94 777 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 EAF2Q96CJ1 260 aaPredicted RBP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 LSG1Q9H089 658 aaKnown RBP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 ZBTB3Q9H5J0 574 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 HMG20BQ9P0W2 317 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 CD163L1Q9NR16 1453 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 RFC1P35251 1148 aaPredicted RBP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 GNG11P61952 73 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 ME3Q16798 604 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 TOM1L2Q6ZVM7 507 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 CACNA2D3Q8IZS8 1091 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 NACAP1Q9BZK3 213 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 DNAI2Q9GZS0 605 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 TRMT1Q9NXH9 659 aaKnown RBP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 PIK3C2BO00750 1634 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 SETD1BQ9UPS6 1966 aaKnown RBP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 NCOA3Q9Y6Q9 1424 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 SHPRHQ149N8 1683 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 SLC27A2O14975 620 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 ZNF500O60304 480 aaPredicted RBP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 ZBTB17Q13105 803 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 SOGA3Q5TF21 947 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 IFT74Q96LB3 600 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.35e-12■□□□□ 9.4
HNRNPU-208ENST00000475997 MYO3AQ8NEV4 1616 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 ATP10DQ9P241 1426 aa6.96□□□□□ -1.3
HNRNPU-208ENST00000475997 SNRPA1P09661 255 aaKnown RBP6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 HAND2P61296 217 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 PROSER3Q2NL68 480 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 IFNL2Q8IZJ0 200 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC12Q8WUD4 166 aaPredicted RBP6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 ORAI2Q96SN7 254 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 PLVAPQ9BX97 442 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 DNAJC25Q9H1X3 360 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 STRN4Q9NRL3 753 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 SSH2Q76I76 1423 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 AK9Q5TCS8 1911 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 NPHP3Q7Z494 1330 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 TRIM21P19474 475 aaKnown RBP6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 TFCP2Q12800 502 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 RAB11FIP4Q86YS3 637 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 MTMR6Q9Y217 621 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 RGS12O14924 1447 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 CPS1P31327 1500 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 MPHOSPH10O00566 681 aaKnown RBP6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 GIGYF1O75420 1035 aaPredicted RBP6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 CLNS1AP54105 237 aaKnown RBP6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 STX1AQ16623 288 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 CCDC129Q6ZRS4 1044 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 MYCBPQ99417 103 aaPredicted RBP6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 TSG101Q99816 390 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 ZHX3Q9H4I2 956 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 CDC37L1Q7L3B6 337 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 CHST3Q7LGC8 479 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 FSIP1Q8NA03 581 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 PI4K2BQ8TCG2 481 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 VCXQ9H320 206 aa6.95□□□□□ -1.3
HNRNPU-208ENST00000475997 TSPOAP1O95153 1857 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 PTGS1P23219 599 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 PIP4K2BP78356 416 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 MXRA7P84157 204 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 MCM6Q14566 821 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 MCMDC2Q4G0Z9 681 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 AP1ARQ63HQ0 302 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 CEP120Q8N960 986 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
HNRNPU-208ENST00000475997 CTCFLQ8NI51 663 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms