RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 TAF6LQ9Y6J9 622 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 NEDD4P46934 1319 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 GOLGA6L9A6NEM1 432 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 NEBLO76041 1014 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 FANCCQ00597 558 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 C11orf91Q3C1V1 193 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 HSP90AB4PQ58FF6 505 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 NAA16Q6N069 864 aaPredicted RBP12.16□□□□□ -0.46
ABCF1-205ENST00000475993 KIF3CO14782 793 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.463e-7■■□□□ 14.5
ABCF1-205ENST00000475993 GNG11P61952 73 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 GGT6Q6P531 493 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 OTUD6BQ8N6M0 293 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 FAM227BQ96M60 508 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 RAB21Q9UL25 225 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 FAN1Q9Y2M0 1017 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 ABCC6O95255 1503 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 ARHGAP6O43182 974 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 N4BP1O75113 896 aaKnown RBP12.15□□□□□ -0.46
ABCF1-205ENST00000475993 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.46
ABCF1-205ENST00000475993 INHBEP58166 350 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 MCM6Q14566 821 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 SMARCC2Q8TAQ2 1214 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 SDF4Q9BRK5 362 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 L1RE1Q9UN81 338 aa12.15□□□□□ -0.46
ABCF1-205ENST00000475993 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
ABCF1-205ENST00000475993 ITFG2Q969R8 447 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 ANKZF1Q9H8Y5 726 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 CPS1P31327 1500 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 HIP1O00291 1037 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 IKBKBO14920 756 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 RGPD1P0DJD0 1748 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
ABCF1-205ENST00000475993 TADA2BQ86TJ2 420 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 FAM177A1Q8N128 213 aaPredicted RBP12.14□□□□□ -0.47
ABCF1-205ENST00000475993 DHX58Q96C10 678 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
ABCF1-205ENST00000475993 HMG20BQ9P0W2 317 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 JCADQ9P266 1359 aa12.14□□□□□ -0.47
ABCF1-205ENST00000475993 PPFIA4O75335 1185 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 ME1P48163 572 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 NLRP12P59046 1061 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 ZC3H12AQ5D1E8 599 aaKnown RBP12.13□□□□□ -0.47
ABCF1-205ENST00000475993 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 MICALL1Q8N3F8 863 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 MSANTD4Q8NCY6 345 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-205ENST00000475993 A0A087WUV0 522 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-205ENST00000475993 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 ZRSR1Q15695 479 aaKnown RBP12.13□□□□□ -0.47
ABCF1-205ENST00000475993 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
ABCF1-205ENST00000475993 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-205ENST00000475993 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
ABCF1-205ENST00000475993 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
ABCF1-205ENST00000475993 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 PSMD1Q99460 953 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 LLPHQ9BRT6 129 aaKnown RBP12.12□□□□□ -0.47
ABCF1-205ENST00000475993 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 MED23Q9ULK4 1368 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 MLH3Q9UHC1 1453 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 CBFA2T2O43439 604 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 NDUFA8P51970 172 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 CHMP4BP1P59074 171 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 SRGAP1Q7Z6B7 1085 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 CNNM3Q8NE01 707 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 DPF2Q92785 391 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 FOXO3O43524 673 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 CUTAO60888 179 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 UBASH3AP57075 661 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 GIMAP7Q8NHV1 300 aa12.12□□□□□ -0.47
ABCF1-205ENST00000475993 MON2Q7Z3U7 1717 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 A0A0D9SFI3 127 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 A0A1B0GVL5 298 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 ERLIN1O75477 346 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
ABCF1-205ENST00000475993 SCRN1Q12765 414 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
ABCF1-205ENST00000475993 PIK3R5Q8WYR1 880 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 PNKPQ96T60 521 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 CAND2O75155 1236 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 MIEF2Q96C03 454 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms