RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DACH1Q9UI36 760 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 ASAP1Q9ULH1 1129 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 TOPAZ1Q8N9V7 1692 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 PXDNQ92626 1479 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 GOLGA6L3A6NEY3 463 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 GOLGA6L22H0YM25 854 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 SCAMP3O14828 347 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 RRM1P23921 792 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 GNALP38405 381 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 CCDC93Q567U6 631 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 NDUFAF2Q8N183 169 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 KCPQ6ZWJ8 1503 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 PIK3C2BO00750 1634 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 CTAGE5O15320 804 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 RNASEH2AO75792 299 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 RBL2Q08999 1139 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 DZIP3Q86Y13 1208 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 SLF2Q8IX21 1173 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 KIAA1958Q8N8K9 716 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 FRS2Q8WU20 508 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 NLRP7Q8WX94 980 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 PHOX2BQ99453 314 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 APBA2Q99767 749 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 AS3MTQ9HBK9 375 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 POLG2Q9UHN1 485 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 ZNF652Q9Y2D9 606 aa7.28□□□□□ -1.24
SMARCE1-208ENST00000474246 NRAPQ86VF7 1730 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 PCNTO95613 3336 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 CCDC163A0A0D9SF12 145 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 TRIM64CA6NLI5 447 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 KIF5CO60282 957 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 RBP3P10745 1247 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 MAP3K12Q12852 859 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 FBXO33Q7Z6M2 555 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 SYMPKQ92797 1274 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 TYW1Q9NV66 732 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 TMCC3Q9ULS5 477 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 THRAP3Q9Y2W1 955 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 SLC45A1Q9Y2W3 748 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 SPATA31A1Q5TZJ5 1347 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 SPATA31A3Q5VYP0 1347 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 WDR33Q9C0J8 1336 aaKnown RBP7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 KIAA1107Q9UPP5 1409 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 PPFIA3O75145 1194 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 VAMP4O75379 141 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 PAX7P23759 505 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 TRAPPC10P48553 1259 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 SIM2Q14190 667 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 BRD3Q15059 726 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 E2F5Q15329 346 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 DEFB115Q30KQ5 88 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 IQCEQ6IPM2 695 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 TTC30AQ86WT1 665 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 SKAP1Q86WV1 359 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 ERP27Q96DN0 273 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 CDHR1Q96JP9 859 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 FRMD6Q96NE9 622 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 SUN2Q9UH99 717 aa7.27□□□□□ -1.25
SMARCE1-208ENST00000474246 IGSF1Q8N6C5 1336 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 KAT6BQ8WYB5 2073 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 BRD4O60885 1362 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 SOWAHDA6NJG2 315 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 TBX3O15119 743 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 TPM2P07951 284 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 NBPF7P0C2Y1 421 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 TRPC1P48995 793 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 SYCP2LQ5T4T6 812 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 KANK3Q6NY19 840 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 TEX19Q8NA77 164 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 POLR3CQ9BUI4 534 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 PPP1R12CQ9BZL4 782 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 OSBPL2Q9H1P3 480 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 BCL2L12Q9HB09 334 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 STXBP5LQ9Y2K9 1186 aa7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 TROQ12816 1431 aaPredicted RBP7.26□□□□□ -1.25
SMARCE1-208ENST00000474246 IPO7O95373 1038 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 NAT2P11245 290 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 CASP2P42575 452 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 ABL2P42684 1182 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 ZNF132P52740 706 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 AMPD3Q01432 767 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 SOGA3Q5TF21 947 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 C16orf87Q6PH81 154 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 RELL1Q8IUW5 271 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 CDCA7LQ96GN5 454 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 REPIN1Q9BWE0 567 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 OVOS2A0A0G2JMS6 1433 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 OVOS2A0A0J9YW53 1432 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 OVOS2Q6IE36 1432 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 TMEM265A0A087WTH1 108 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 PRSS12P56730 875 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 MDM2Q00987 491 aaPredicted RBP7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 OTUD6AQ7L8S5 288 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 IER2Q9BTL4 223 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 TMEM63CQ9P1W3 806 aa7.25□□□□□ -1.25
SMARCE1-208ENST00000474246 MTUS2Q5JR59 1369 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 RASSF10A6NK89 507 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms