RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	SPDYE2B	A6NHP3	402 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	USP2	O75604	605 aa	Predicted RBP	12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	SLC4A2	P04920	1241 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	SPDYE6	P0CI01	402 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	IGHMBP2	P38935	993 aa	Known RBP	12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	SREBF2	Q12772	1141 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	CRHR2	Q13324	411 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	TWISTNB	Q3B726	338 aa	Predicted RBP	12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	CFAP100	Q494V2	611 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	ARMC9	Q7Z3E5	817 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	MTMR14	Q8NCE2	650 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	CD99L2	Q8TCZ2	262 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	ZNF594	Q96JF6	807 aa	Predicted RBP	12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	TRIM17	Q9Y577	477 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345	OTOF	Q9HC10	1997 aa		12.36	□□□□□ -0.43
MCF2L-223	ENST00000473345		F6X3S4	739 aa		12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	IL1R1	P14778	569 aa		12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	EN2	P19622	333 aa	Predicted RBP	12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	NF2	P35240	595 aa		12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	FLII	Q13045	1269 aa		12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	C15orf52	Q6ZUT6	534 aa	Known RBP	12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	WWC1	Q8IX03	1113 aa		12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	SLC10A4	Q96EP9	437 aa		12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	BRCA2	P51587	3418 aa		12.35	□□□□□ -0.43
MCF2L-223	ENST00000473345	COL1A1	P02452	1464 aa	Predicted RBP	12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	MANSC4	A6NHS7	340 aa	Predicted RBP	12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	DLGAP5	Q15398	846 aa		12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	HABP4	Q5JVS0	413 aa	Known RBP	12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	MS4A4A	Q96JQ5	239 aa		12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	TEPSIN	Q96N21	525 aa		12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	ANKRD2	Q9GZV1	360 aa		12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	PTPN22	Q9Y2R2	807 aa		12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	ZSWIM8	A7E2V4	1837 aa		12.34	□□□□□ -0.43
MCF2L-223	ENST00000473345	TESPA1	A2RU30	521 aa	Predicted RBP	12.33	□□□□□ -0.44
MCF2L-223	ENST00000473345	NEXN	Q0ZGT2	675 aa		12.33	□□□□□ -0.44
MCF2L-223	ENST00000473345	RASA3	Q14644	834 aa		12.33	□□□□□ -0.44
MCF2L-223	ENST00000473345	DNAAF4	Q8WXU2	420 aa		12.33	□□□□□ -0.44
MCF2L-223	ENST00000473345	MPHOSPH8	Q99549	860 aa		12.33	□□□□□ -0.44
MCF2L-223	ENST00000473345	VEZT	Q9HBM0	779 aa		12.33	□□□□□ -0.44
MCF2L-223	ENST00000473345	CENPF	P49454	3210 aa		12.33	□□□□□ -0.44
MCF2L-223	ENST00000473345	VAMP4	O75379	141 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	ZBTB48	P10074	688 aa	Predicted RBP	12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	CALD1	Q05682	793 aa	Known RBP	12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	BEND3	Q5T5X7	828 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	LINS1	Q8NG48	757 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	BRI3BP	Q8WY22	251 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	ARMC5	Q96C12	935 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	KAZALD1	Q96I82	304 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	PUS3	Q9BZE2	481 aa	Known RBP	12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	ELP3	Q9H9T3	547 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	FANCI	Q9NVI1	1328 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	ECM29	Q5VYK3	1845 aa		12.32	□□□□□ -0.44
MCF2L-223	ENST00000473345	ANKRD18B	A2A2Z9	1011 aa		12.31	□□□□□ -0.44
MCF2L-223	ENST00000473345	LMBR1L	Q6UX01	489 aa		12.31	□□□□□ -0.44
MCF2L-223	ENST00000473345	STK31	Q9BXU1	1019 aa		12.31	□□□□□ -0.44
MCF2L-223	ENST00000473345	ARHGAP39	Q9C0H5	1083 aa		12.31	□□□□□ -0.44
MCF2L-223	ENST00000473345	TDRD3	Q9H7E2	651 aa	Known RBP	12.31	□□□□□ -0.44
MCF2L-223	ENST00000473345	ZNF70	Q9UC06	446 aa	Predicted RBP	12.31	□□□□□ -0.44
MCF2L-223	ENST00000473345	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	PLIN1	O60240	522 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	ALDH1A1	P00352	501 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	GYG1	P46976	350 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	KCNJ4	P48050	445 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	FKBP1A	P62942	108 aa	Known RBP	12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	FKBP5	Q13451	457 aa	Predicted RBP	12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	CCDC27	Q2M243	656 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	SPDYE2	Q495Y8	402 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	FAM43A	Q8N2R8	423 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	TDRD7	Q8NHU6	1098 aa	Known RBP	12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	OPTN	Q96CV9	577 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	TMEM39B	Q9GZU3	492 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	PPP2R3B	Q9Y5P8	575 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	FAM205A	Q6ZU69	1335 aa		12.3	□□□□□ -0.44
MCF2L-223	ENST00000473345	CTGF	P29279	349 aa		12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	MMP14	P50281	582 aa		12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	FXR1	P51114	621 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	CACNB3	P54284	484 aa		12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	INHBE	P58166	350 aa		12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	ZNF333	Q96JL9	665 aa		12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	FAM84B	Q96KN1	310 aa	Predicted RBP	12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	PTCH2	Q9Y6C5	1203 aa		12.29	□□□□□ -0.44
MCF2L-223	ENST00000473345	TCP10L2	B9ZVM9	353 aa		12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	PPP1R12B	O60237	982 aa	Predicted RBP	12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	SP3	Q02447	781 aa		12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	EXOSC9	Q06265	439 aa	Known RBP	12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	IFIT5	Q13325	482 aa	Known RBP	12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	VGLL4	Q14135	290 aa		12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	ANKRD13A	Q8IZ07	590 aa		12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	EFCC1	Q9HA90	598 aa		12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	CHMP3	Q9Y3E7	222 aa		12.28	□□□□□ -0.44
MCF2L-223	ENST00000473345	MYC	P01106	439 aa	Predicted RBP	12.27	□□□□□ -0.45
MCF2L-223	ENST00000473345	RBM5	P52756	815 aa	Known RBP eCLIP	12.27	□□□□□ -0.45
MCF2L-223	ENST00000473345	SUPT20HL1	Q3ZLR7	823 aa		12.27	□□□□□ -0.45
MCF2L-223	ENST00000473345	MFSD14B	Q5SR56	506 aa		12.27	□□□□□ -0.45
MCF2L-223	ENST00000473345	ZNF804A	Q7Z570	1209 aa		12.27	□□□□□ -0.45
MCF2L-223	ENST00000473345	DZIP1L	Q8IYY4	767 aa	Known RBP	12.27	□□□□□ -0.45
MCF2L-223	ENST00000473345	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.27	□□□□□ -0.45

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